-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_930

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 3335, 3621
Sorry, prediction snap_scaffold_930-snap.2-T1 fails validation.
(ATG)	 GG	1165-1266	GT	CGG
(CTG)	 AG	3335-3621	GT	AGG
-recovered snap_scaffold_930-snap.2-T1, initial, 1165, 1266
-recovered snap_scaffold_930-snap.2-T1, internal, 3335, 3621
Valid prediction for GeneMark_model.108622_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 19, 33
Sorry, prediction GeneMark_model.108623_t fails validation.
(GAG)	 AG	19-33	GT	AGG
(AGA)	 AG	57-115	GT	CAG
(TCT)	 AG	405-496	CA	AGC
-recovered GeneMark_model.108623_t, terminal, 405, 496
-recovered GeneMark_model.108623_t, internal, 19, 33
-recovered GeneMark_model.108623_t, internal, 57, 115
Valid prediction for GeneMark_model.108621_t
Valid prediction for snap_scaffold_930-snap.1-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 3517, rend_intergenic: 1165  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 3947
-exon list size: 19


building trellis

4.8    
9.5    
14.3    
19.0    
23.8    
28.6    
33.3    
38.1    
42.9    
47.6    
52.4    
57.1    
61.9    
66.7    
71.4    
76.2    
81.0    
85.7    
90.5    
95.2    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 3517, rend_intergenic: 1165  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support