-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_927

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 260, 268
Couldn't classify 1585, 1654
Sorry, prediction GeneMark_model.108618_t fails validation.
(AGA)	 AG	260-268	GT	GAG
(GGA)	 AG	984-1091	GT	AGG
(GAG)	 AG	1585-1654	GT	AGG
-recovered GeneMark_model.108618_t, internal, 260, 268
-recovered GeneMark_model.108618_t, internal, 984, 1091
-recovered GeneMark_model.108618_t, internal, 1585, 1654
Couldn't classify 968, 1139
Couldn't classify 1538, 1654
Sorry, prediction snap_scaffold_927-snap.1-T1 fails validation.
(AGA)	 AG	968-1139	GT	CTG
(CGC)	 AG	1538-1654	GT	AGG
-recovered snap_scaffold_927-snap.1-T1, internal, 968, 1139
-recovered snap_scaffold_927-snap.1-T1, internal, 1538, 1654

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3957
-exon list size: 11


building trellis

7.7    
15.4    
23.1    
30.8    
38.5    
46.2    
53.8    
61.5    
69.2    
76.9    
84.6    
92.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support