-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_914

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.108599_t
Couldn't classify 1673, 1717
Sorry, prediction GeneMark_model.108597_t fails validation.
(AGA)	 AG	1673-1717	GT	AGG
(AAG)	 AG	1750-2071	GA	GAG
-recovered GeneMark_model.108597_t, terminal, 1750, 2071
-recovered GeneMark_model.108597_t, internal, 1673, 1717
Valid prediction for GlimmerHMM_glimmerT_62332-T1
add_exon() Sorry, GlimmerHMM_glimmerT_62332-T1 3414-3604-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3990
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support