-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_9/scaffold_9_9421176-9678906 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_9-snap.1900-T1 Valid prediction for snap_scaffold_9-snap.1937-T1 Valid prediction for GeneMark_model.39705_t Couldn't classify 225960, 226048 Couldn't classify 226491, 226596 Sorry, prediction pasa_asmbl_54202.p1 fails validation. (CCT) AA 225960-226048 GT AGG (ATG) AG 226129-226180 GT AGG (GAG) AG 226275-226375 GT AAG (ATG) AG 226491-226596 CT AGC add_exon() Sorry, pasa_asmbl_54202.p1 226129-226180-initial-1 is invalid. -recovered pasa_asmbl_54202.p1, initial, 226129, 226180 -recovered pasa_asmbl_54202.p1, internal, 226129, 226180 -recovered pasa_asmbl_54202.p1, internal, 226275, 226375 Valid prediction for Augustus_model.g15518.t1 Valid prediction for pasa_asmbl_54190.p1 Valid prediction for GlimmerHMM_glimmerT_23196-T1 Couldn't classify 231956, 232230 Couldn't classify 232312, 232628 Sorry, prediction CodingQuarry_transcript_62118-T1 fails validation. (ATG) AC 231627-231669 GT GGG (ATG) AG 231782-231867 GT AGG (GAT) AG 231956-232230 AT CCA (CTC) AC 232312-232628 GT AGG (TAG) AG 232745-232810 GT AGG (CTG) AG 232901-233099 GT GAG (GAA) AG 233222-233279 GT CGG (GGT) AG 233474-233586 GT GAG (CAC) AG 233691-233841 GT AGG (GAG) AG 233965-234047 GT AAG (ACA) AG 234126-234255 GT AAG (CTC) AG 234465-234582 GT CAG (ATG) AG 234744-234855 GT AGG (TGT) AG 235118-235174 GT AGG (CTC) AG 235701-235757 GT AAG (AGC) AG 235850-235961 GT GGG (AGT) AG 236122-236247 TA AGT -recovered CodingQuarry_transcript_62118-T1, initial, 231627, 231669 add_exon() Sorry, CodingQuarry_transcript_62118-T1 231782-231867-initial-1 is invalid. -recovered CodingQuarry_transcript_62118-T1, initial, 231782, 231867 add_exon() Sorry, CodingQuarry_transcript_62118-T1 234744-234855-initial-1 is invalid. -recovered CodingQuarry_transcript_62118-T1, initial, 234744, 234855 -recovered CodingQuarry_transcript_62118-T1, terminal, 236122, 236247 -recovered CodingQuarry_transcript_62118-T1, internal, 231782, 231867 -recovered CodingQuarry_transcript_62118-T1, internal, 232745, 232810 -recovered CodingQuarry_transcript_62118-T1, internal, 232901, 233099 -recovered CodingQuarry_transcript_62118-T1, internal, 233222, 233279 -recovered CodingQuarry_transcript_62118-T1, internal, 233474, 233586 -recovered CodingQuarry_transcript_62118-T1, internal, 233691, 233841 -recovered CodingQuarry_transcript_62118-T1, internal, 233965, 234047 -recovered CodingQuarry_transcript_62118-T1, internal, 234126, 234255 -recovered CodingQuarry_transcript_62118-T1, internal, 234465, 234582 -recovered CodingQuarry_transcript_62118-T1, internal, 234744, 234855 -recovered CodingQuarry_transcript_62118-T1, internal, 235118, 235174 -recovered CodingQuarry_transcript_62118-T1, internal, 235701, 235757 -recovered CodingQuarry_transcript_62118-T1, internal, 235850, 235961 Valid prediction for snap_scaffold_9-snap.1926-T1 Valid prediction for GeneMark_model.39722_t Valid prediction for pasa_asmbl_54198.p1 Valid prediction for GlimmerHMM_glimmerT_23170-T1 Valid prediction for GlimmerHMM_glimmerT_23175-T1 Couldn't classify 226784, 226881 Sorry, prediction pasa_asmbl_54203.p1 fails validation. (GGG) CA 226784-226881 GT AGG (GAG) AG 226978-227047 GT AGG (CTC) AG 227147-227241 GT CGG (TCC) AG 227399-227475 GT ACG (AGA) AG 227559-227713 GT GGG (GGG) AG 227799-227908 GT GGG (GCA) AG 228021-228131 GT TTG (ATT) AG 228498-228559 GT GGG (GTG) AG 228809-228963 CT AGC -recovered pasa_asmbl_54203.p1, terminal, 228809, 228963 -recovered pasa_asmbl_54203.p1, internal, 226978, 227047 -recovered pasa_asmbl_54203.p1, internal, 227147, 227241 -recovered pasa_asmbl_54203.p1, internal, 227399, 227475 -recovered pasa_asmbl_54203.p1, internal, 227559, 227713 -recovered pasa_asmbl_54203.p1, internal, 227799, 227908 -recovered pasa_asmbl_54203.p1, internal, 228021, 228131 -recovered pasa_asmbl_54203.p1, internal, 228498, 228559 Valid prediction for GeneMark_model.39698_t Valid prediction for GeneMark_model.39694_t Valid prediction for snap_scaffold_9-snap.1939-T1 Valid prediction for snap_scaffold_9-snap.1936-T1 Valid prediction for GlimmerHMM_glimmerT_23162-T1 Valid prediction for snap_scaffold_9-snap.1913-T1 Valid prediction for GlimmerHMM_glimmerT_23167-T1 Valid prediction for GeneMark_model.39681_t Couldn't classify 46017, 46041 Sorry, prediction pasa_asmbl_54187.p1 fails validation. (CAT) AC 46017-46041 GT AGG (CCC) AG 46236-46427 GT ACG (CCA) AG 46666-46718 GT AGG (CTG) AG 46813-46917 CT GAC -recovered pasa_asmbl_54187.p1, terminal, 46813, 46917 -recovered pasa_asmbl_54187.p1, internal, 46236, 46427 -recovered pasa_asmbl_54187.p1, internal, 46666, 46718 Valid prediction for pasa_asmbl_54205.p1 Valid prediction for GeneMark_model.39684_t Valid prediction for GlimmerHMM_glimmerT_23192-T1 Valid prediction for GeneMark_model.39700_t Valid prediction for GeneMark_model.39703_t Valid prediction for snap_scaffold_9-snap.1942-T1 Valid prediction for snap_scaffold_9-snap.1917-T1 Valid prediction for GlimmerHMM_glimmerT_23164-T1 Valid prediction for GlimmerHMM_glimmerT_23172-T1 Valid prediction for snap_scaffold_9-snap.1909-T1 Valid prediction for HiQ_model.g15540.t1 Valid prediction for CodingQuarry_transcript_62117-T1 Valid prediction for GlimmerHMM_glimmerT_23194-T1 Valid prediction for GeneMark_model.39720_t Valid prediction for GeneMark_model.39696_t Valid prediction for GlimmerHMM_glimmerT_23180-T1 Valid prediction for GlimmerHMM_glimmerT_23188-T1 Valid prediction for GeneMark_model.39717_t Valid prediction for snap_scaffold_9-snap.1901-T1 Valid prediction for Augustus_model.g15539.t1 Valid prediction for GeneMark_model.39687_t Valid prediction for CodingQuarry_transcript_62104-T1 Valid prediction for Augustus_model.g15532.t1 Valid prediction for Augustus_model.g15520.t1 Valid prediction for GeneMark_model.39718_t Couldn't classify 212501, 213053 Couldn't classify 213283, 213296 Sorry, prediction pasa_asmbl_54194.p1 fails validation. (GAT) CA 212501-213053 GT AGG (TGT) AG 213148-213192 GT AGG (AAG) AG 213283-213296 GA GGG -recovered pasa_asmbl_54194.p1, internal, 213148, 213192 Valid prediction for snap_scaffold_9-snap.1905-T1 Valid prediction for GlimmerHMM_glimmerT_23169-T1 Valid prediction for GlimmerHMM_glimmerT_23195-T1 Valid prediction for Augustus_model.g15519.t1 Valid prediction for GeneMark_model.39715_t Valid prediction for GeneMark_model.39721_t Valid prediction for CodingQuarry_transcript_62115-T1 Valid prediction for GlimmerHMM_glimmerT_23174-T1 Valid prediction for snap_scaffold_9-snap.1943-T1 Valid prediction for snap_scaffold_9-snap.1895-T1 Couldn't classify 185891, 185941 Couldn't classify 186774, 186857 Sorry, prediction pasa_asmbl_54192.p1 fails validation. (GAG) AA 185891-185941 GT CAG (AGT) AG 186144-186275 GT GGG (TAC) AG 186377-186478 GT AGG (ATC) AG 186774-186857 AA GCA -recovered pasa_asmbl_54192.p1, internal, 186144, 186275 -recovered pasa_asmbl_54192.p1, internal, 186377, 186478 Valid prediction for HiQ_model.g15524.t1 Valid prediction for GeneMark_model.39689_t Valid prediction for GeneMark_model.39693_t Valid prediction for snap_scaffold_9-snap.1941-T1 Valid prediction for Augustus_model.g15535.t1 Couldn't classify 224770, 224908 Sorry, prediction pasa_asmbl_54200.p1 fails validation. (ATG) GA 223705-223757 GT AGG (GCA) AG 223841-223898 GT AGG (GTG) AG 224103-224222 GT TGG (AAC) AG 224322-224375 GT CTG (ATG) AG 224581-224639 GT CAG (GTT) AG 224770-224908 AC CCA -recovered pasa_asmbl_54200.p1, initial, 223705, 223757 -recovered pasa_asmbl_54200.p1, initial, 224581, 224639 -recovered pasa_asmbl_54200.p1, internal, 223841, 223898 -recovered pasa_asmbl_54200.p1, internal, 224103, 224222 -recovered pasa_asmbl_54200.p1, internal, 224322, 224375 -recovered pasa_asmbl_54200.p1, internal, 224581, 224639 Valid prediction for HiQ_model.g15538.t1 Valid prediction for GlimmerHMM_glimmerT_23191-T1 Valid prediction for snap_scaffold_9-snap.1921-T1 Valid prediction for snap_scaffold_9-snap.1916-T1 Valid prediction for GeneMark_model.39704_t Valid prediction for GeneMark_model.39712_t Valid prediction for snap_scaffold_9-snap.1930-T1 Valid prediction for GeneMark_model.39725_t Valid prediction for CodingQuarry_transcript_62116-T1 Valid prediction for snap_scaffold_9-snap.1925-T1 Valid prediction for Augustus_model.g15516.t1 Valid prediction for snap_scaffold_9-snap.1933-T1 Couldn't classify 203243, 203399 Sorry, prediction pasa_asmbl_54193.p1 fails validation. (CCA) AC 203243-203399 GT GGG (GTG) AG 204089-204236 GT TTG (GAA) AG 204385-204461 GT TGG (TAA) AG 204600-204655 GT CGG (ACT) AG 204779-204876 GT TTG (GGT) AG 205038-205160 GT AGG (GTC) AG 205243-205509 GT GTG (TGC) AG 205816-205896 GT AGG (AGC) AG 205994-206053 GT AAG (GGA) AG 206138-206194 GT CGG (GCC) AG 206345-206367 GT TGG (AGC) AG 206478-206533 GT AGG (ACT) AG 206625-206825 GT AGG (GTG) AG 206961-207037 GT CTG (TCC) AG 207140-207184 GT CGG (GTT) AG 207306-207438 GT TTG (GTG) AG 207618-207706 GT CGG (GAA) AG 207792-207883 GT AGG (GTC) AG 208024-208156 GT TGG (CCC) AG 208267-208354 GT AAG (GGT) AG 208451-208609 GA GAG add_exon() Sorry, pasa_asmbl_54193.p1 205816-205896-terminal-1 is invalid. -recovered pasa_asmbl_54193.p1, terminal, 205816, 205896 -recovered pasa_asmbl_54193.p1, terminal, 208451, 208609 -recovered pasa_asmbl_54193.p1, internal, 204089, 204236 -recovered pasa_asmbl_54193.p1, internal, 204385, 204461 -recovered pasa_asmbl_54193.p1, internal, 204600, 204655 -recovered pasa_asmbl_54193.p1, internal, 204779, 204876 -recovered pasa_asmbl_54193.p1, internal, 205038, 205160 -recovered pasa_asmbl_54193.p1, internal, 205243, 205509 -recovered pasa_asmbl_54193.p1, internal, 205816, 205896 -recovered pasa_asmbl_54193.p1, internal, 205994, 206053 -recovered pasa_asmbl_54193.p1, internal, 206138, 206194 -recovered pasa_asmbl_54193.p1, internal, 206345, 206367 -recovered pasa_asmbl_54193.p1, internal, 206478, 206533 -recovered pasa_asmbl_54193.p1, internal, 206625, 206825 -recovered pasa_asmbl_54193.p1, internal, 206961, 207037 -recovered pasa_asmbl_54193.p1, internal, 207140, 207184 -recovered pasa_asmbl_54193.p1, internal, 207306, 207438 -recovered pasa_asmbl_54193.p1, internal, 207618, 207706 -recovered pasa_asmbl_54193.p1, internal, 207792, 207883 -recovered pasa_asmbl_54193.p1, internal, 208024, 208156 -recovered pasa_asmbl_54193.p1, internal, 208267, 208354 Valid prediction for HiQ_model.g15534.t1 Valid prediction for snap_scaffold_9-snap.1906-T1 Valid prediction for snap_scaffold_9-snap.1898-T1 Valid prediction for snap_scaffold_9-snap.1903-T1 Valid prediction for GeneMark_model.39708_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g15529.t1 Couldn't classify 64376, 64483 Sorry, prediction pasa_asmbl_55182.p1 fails validation. (TCC) CC 64376-64483 GT AGG (CTT) AG 64760-64793 GT AGG (CCA) AG 65002-65115 GT AGG (GAG) AG 65655-65761 GT AGG (AAC) AG 65875-66012 GT TGG (CCC) AG 66217-66294 GT AGG (CCT) AG 68267-68407 TT AAT -recovered pasa_asmbl_55182.p1, terminal, 68267, 68407 -recovered pasa_asmbl_55182.p1, internal, 64760, 64793 -recovered pasa_asmbl_55182.p1, internal, 65002, 65115 -recovered pasa_asmbl_55182.p1, internal, 65655, 65761 -recovered pasa_asmbl_55182.p1, internal, 65875, 66012 -recovered pasa_asmbl_55182.p1, internal, 66217, 66294 Couldn't classify 19452, 19520 Couldn't classify 19855, 20033 Sorry, prediction pasa_asmbl_55688.p1 fails validation. (TAC) TG 19452-19520 GT AGG (GTG) AG 19651-19768 GT AGG (GAG) AG 19855-20033 GC TGG add_exon() Sorry, pasa_asmbl_55688.p1 19651-19768-terminal-3 is invalid. -recovered pasa_asmbl_55688.p1, terminal, 19651, 19768 -recovered pasa_asmbl_55688.p1, internal, 19651, 19768 -recovered pasa_asmbl_55688.p1, internal, 19855, 20033 Valid prediction for GlimmerHMM_glimmerT_23198-T1 Valid prediction for GlimmerHMM_glimmerT_23189-T1 Couldn't classify 202351, 202533 Sorry, prediction pasa_asmbl_55152.p1 fails validation. (CTT) TC 202351-202533 GT GGG (GAG) AG 202898-203001 GT AGG (GTC) AG 203261-203339 GT AGG (CTG) AG 203425-203478 GT GGG (GGT) AG 203964-204047 GT AGG (ACG) AG 204180-204280 GT GGG (GTT) AG 204579-204708 GT AGG (CTC) AG 205007-205162 GT AGG (GTG) AG 205430-205501 GT AGG (GGC) AG 205665-205751 GT AGG (GGG) AG 205866-206090 CC GAC -recovered pasa_asmbl_55152.p1, terminal, 205866, 206090 -recovered pasa_asmbl_55152.p1, internal, 202898, 203001 -recovered pasa_asmbl_55152.p1, internal, 203261, 203339 -recovered pasa_asmbl_55152.p1, internal, 203425, 203478 -recovered pasa_asmbl_55152.p1, internal, 203964, 204047 -recovered pasa_asmbl_55152.p1, internal, 204180, 204280 -recovered pasa_asmbl_55152.p1, internal, 204579, 204708 -recovered pasa_asmbl_55152.p1, internal, 205007, 205162 -recovered pasa_asmbl_55152.p1, internal, 205430, 205501 -recovered pasa_asmbl_55152.p1, internal, 205665, 205751 Valid prediction for snap_scaffold_9-snap.1902-T1 Valid prediction for snap_scaffold_9-snap.1928-T1 Valid prediction for GeneMark_model.39682_t Valid prediction for snap_scaffold_9-snap.1932-T1 Valid prediction for GeneMark_model.39709_t Valid prediction for GeneMark_model.39683_t Valid prediction for pasa_asmbl_55197.p1 Valid prediction for CodingQuarry_transcript_62112-T1 Valid prediction for snap_scaffold_9-snap.1912-T1 Valid prediction for HiQ_model.g15531.t1 Valid prediction for snap_scaffold_9-snap.1944-T1 Couldn't classify 85768, 86115 Couldn't classify 86208, 86228 Sorry, prediction pasa_asmbl_55172.p1 fails validation. (AGC) AG 85768-86115 GT AGG (GGG) AG 86208-86228 GG GTG -recovered pasa_asmbl_55172.p1, internal, 85768, 86115 Valid prediction for GlimmerHMM_glimmerT_23168-T1 Valid prediction for CodingQuarry_transcript_62110-T1 Valid prediction for Augustus_model.g15527.t1 Valid prediction for GlimmerHMM_glimmerT_23183-T1 Valid prediction for snap_scaffold_9-snap.1918-T1 Valid prediction for GeneMark_model.39688_t Valid prediction for snap_scaffold_9-snap.1940-T1 Valid prediction for GlimmerHMM_glimmerT_23166-T1 Valid prediction for snap_scaffold_9-snap.1924-T1 Valid prediction for GeneMark_model.39719_t Valid prediction for GeneMark_model.39697_t Valid prediction for snap_scaffold_9-snap.1897-T1 Valid prediction for Augustus_model.g15515.t1 Valid prediction for snap_scaffold_9-snap.1935-T1 Valid prediction for snap_scaffold_9-snap.1931-T1 Valid prediction for GlimmerHMM_glimmerT_23161-T1 Valid prediction for GeneMark_model.39706_t Valid prediction for snap_scaffold_9-snap.1907-T1 Valid prediction for CodingQuarry_transcript_62114-T1 Valid prediction for CodingQuarry_transcript_62106-T1 Valid prediction for GlimmerHMM_glimmerT_23197-T1 Couldn't classify 20103, 20420 Sorry, prediction pasa_asmbl_55192.p1 fails validation. (CGT) GC 20103-20420 AA GAA Valid prediction for GlimmerHMM_glimmerT_23171-T1 Valid prediction for snap_scaffold_9-snap.1945-T1 Valid prediction for CodingQuarry_transcript_62119-T1 Valid prediction for GlimmerHMM_glimmerT_23177-T1 Valid prediction for pasa_asmbl_55175.p1 Couldn't classify 140286, 140366 Sorry, prediction CodingQuarry_transcript_62103-T1 fails validation. (ATG) AT 136609-136625 GT TTG (CCG) AG 137588-137618 GT AGG (TAC) AG 138803-138948 GT AGG (TAA) AG 139184-139277 GC GTG (CTG) CT 140286-140366 GT ATG (GTG) AG 140589-140672 GT AGG (GAC) AG 140790-140867 GT AGG (AAA) AG 141009-141119 GT GGG (CAA) AG 141595-141717 GT AGG (ATG) AG 141853-141900 AA GAA -recovered CodingQuarry_transcript_62103-T1, initial, 136609, 136625 -recovered CodingQuarry_transcript_62103-T1, terminal, 141853, 141900 -recovered CodingQuarry_transcript_62103-T1, internal, 137588, 137618 -recovered CodingQuarry_transcript_62103-T1, internal, 138803, 138948 -recovered CodingQuarry_transcript_62103-T1, internal, 139184, 139277 -recovered CodingQuarry_transcript_62103-T1, internal, 140589, 140672 -recovered CodingQuarry_transcript_62103-T1, internal, 140790, 140867 -recovered CodingQuarry_transcript_62103-T1, internal, 141009, 141119 -recovered CodingQuarry_transcript_62103-T1, internal, 141595, 141717 Valid prediction for GeneMark_model.39714_t Valid prediction for GeneMark_model.39692_t Valid prediction for GeneMark_model.39724_t Valid prediction for GeneMark_model.39716_t Couldn't classify 118820, 118873 Sorry, prediction pasa_asmbl_55162.p1 fails validation. (CGA) TT 118820-118873 GT ATG (ACC) AG 118977-119112 GT AGG (GCC) AG 119245-119389 GT AGG (TGG) AG 120651-120770 GT AGG (GTA) AG 120908-121043 GT AGG (GTT) AG 121223-121320 GT AAG (GAT) AG 121451-121562 GT AGG (GTG) AG 121680-121814 CG AAC -recovered pasa_asmbl_55162.p1, terminal, 121680, 121814 -recovered pasa_asmbl_55162.p1, internal, 118977, 119112 -recovered pasa_asmbl_55162.p1, internal, 119245, 119389 -recovered pasa_asmbl_55162.p1, internal, 120651, 120770 -recovered pasa_asmbl_55162.p1, internal, 120908, 121043 -recovered pasa_asmbl_55162.p1, internal, 121223, 121320 -recovered pasa_asmbl_55162.p1, internal, 121451, 121562 Valid prediction for pasa_asmbl_55177.p1 Valid prediction for CodingQuarry_transcript_62108-T1 Valid prediction for GlimmerHMM_glimmerT_23176-T1 Valid prediction for GeneMark_model.39707_t Valid prediction for snap_scaffold_9-snap.1934-T1 Couldn't classify 84120, 84254 Couldn't classify 84594, 84742 Sorry, prediction pasa_asmbl_55173.p1 fails validation. (GAA) TC 84120-84254 GT TGG (ATG) AG 84361-84508 GT CAG (GGA) AG 84594-84742 GT AGG -recovered pasa_asmbl_55173.p1, initial, 84361, 84508 -recovered pasa_asmbl_55173.p1, internal, 84361, 84508 -recovered pasa_asmbl_55173.p1, internal, 84594, 84742 Couldn't classify 107462, 107553 Couldn't classify 111267, 111285 Sorry, prediction pasa_asmbl_55166.p1 fails validation. (GGG) AT 107462-107553 GT CAG (TGC) AG 109236-109372 GT TGG (CCC) AG 109467-109611 GT CGG (GTT) AG 110009-110102 GT GGG (TCG) AG 110291-110360 GT GGG (AGA) AG 110598-110737 GT AGG (GTA) AG 110849-110925 GT GGG (GCC) AG 111267-111285 GC TGG -recovered pasa_asmbl_55166.p1, internal, 109236, 109372 -recovered pasa_asmbl_55166.p1, internal, 109467, 109611 -recovered pasa_asmbl_55166.p1, internal, 110009, 110102 -recovered pasa_asmbl_55166.p1, internal, 110291, 110360 -recovered pasa_asmbl_55166.p1, internal, 110598, 110737 -recovered pasa_asmbl_55166.p1, internal, 110849, 110925 -recovered pasa_asmbl_55166.p1, internal, 111267, 111285 Valid prediction for snap_scaffold_9-snap.1908-T1 Valid prediction for pasa_asmbl_55140.p1 Valid prediction for snap_scaffold_9-snap.1938-T1 Valid prediction for Augustus_model.g15530.t1 Couldn't classify 112217, 112343 Couldn't classify 112799, 112842 Sorry, prediction pasa_asmbl_55164.p1 fails validation. (TTC) GC 112217-112343 GT AAG (ACA) AG 112499-112708 GT AGG (GGA) AG 112799-112842 GC AGG -recovered pasa_asmbl_55164.p1, internal, 112499, 112708 -recovered pasa_asmbl_55164.p1, internal, 112799, 112842 Valid prediction for CodingQuarry_transcript_62109-T1 Valid prediction for Augustus_model.g15541.t1 Valid prediction for GlimmerHMM_glimmerT_23190-T1 Valid prediction for GeneMark_model.39679_t Valid prediction for Augustus_model.g15511.t1 Valid prediction for snap_scaffold_9-snap.1923-T1 Valid prediction for GlimmerHMM_glimmerT_23186-T1 Couldn't classify 15585, 15806 Sorry, prediction pasa_asmbl_55196.p1 fails validation. (AAG) GA 15585-15806 GT AGG (GAC) AG 16024-16113 GC AGG -recovered pasa_asmbl_55196.p1, terminal, 16024, 16113 -recovered pasa_asmbl_55196.p1, internal, 16024, 16113 Valid prediction for pasa_asmbl_55147.p1 Valid prediction for Augustus_model.g15512.t1 Valid prediction for CodingQuarry_transcript_62101-T1 Valid prediction for Augustus_model.g15513.t1 Valid prediction for HiQ_model.g15542.t1 Valid prediction for Augustus_model.g15517.t1 Valid prediction for GeneMark_model.39701_t Valid prediction for CodingQuarry_transcript_62099-T1 Valid prediction for Augustus_model.g15526.t1 Valid prediction for Augustus_model.g15536.t1 Valid prediction for snap_scaffold_9-snap.1927-T1 Couldn't classify 86532, 86653 Couldn't classify 89133, 89213 Sorry, prediction pasa_asmbl_55171.p1 fails validation. (ACC) TG 86532-86653 GT AGG (ATA) AG 86905-86977 GT AGG (ATT) AG 87221-87424 GT AGG (TAC) AG 87573-87716 GT AGG (GTA) AG 87821-87914 GT TGG (GTC) AG 88052-88236 GT GGG (AAC) AG 88865-89011 GT AGG (GGC) AG 89133-89213 AC CCA -recovered pasa_asmbl_55171.p1, internal, 86905, 86977 -recovered pasa_asmbl_55171.p1, internal, 87221, 87424 -recovered pasa_asmbl_55171.p1, internal, 87573, 87716 -recovered pasa_asmbl_55171.p1, internal, 87821, 87914 -recovered pasa_asmbl_55171.p1, internal, 88052, 88236 -recovered pasa_asmbl_55171.p1, internal, 88865, 89011 Valid prediction for GeneMark_model.39723_t Valid prediction for Augustus_model.g15522.t1 Valid prediction for GlimmerHMM_glimmerT_23193-T1 Valid prediction for GeneMark_model.39685_t Couldn't classify 56139, 56409 Couldn't classify 62085, 62133 Sorry, prediction pasa_asmbl_55186.p1 fails validation. (GAG) GG 56139-56409 GT CGG (ATC) AG 59188-59332 GT AGG (TCG) AG 59618-59744 GT TGG (GAC) AG 59892-59997 GT AGG (AGC) AG 60079-60215 GT AGG (ATT) AG 60330-60439 GT TGG (TGT) AG 60937-61030 GT AGG (CCT) AG 61212-61332 GT ACG (TGG) AG 61541-61689 GT AGG (GGC) AG 61774-61850 GT AGG (GAG) AG 62085-62133 GT AGG -recovered pasa_asmbl_55186.p1, internal, 59188, 59332 -recovered pasa_asmbl_55186.p1, internal, 59618, 59744 -recovered pasa_asmbl_55186.p1, internal, 59892, 59997 -recovered pasa_asmbl_55186.p1, internal, 60079, 60215 -recovered pasa_asmbl_55186.p1, internal, 60330, 60439 -recovered pasa_asmbl_55186.p1, internal, 60937, 61030 -recovered pasa_asmbl_55186.p1, internal, 61212, 61332 -recovered pasa_asmbl_55186.p1, internal, 61541, 61689 -recovered pasa_asmbl_55186.p1, internal, 61774, 61850 -recovered pasa_asmbl_55186.p1, internal, 62085, 62133 Couldn't classify 118593, 118678 Couldn't classify 118974, 119112 Sorry, prediction CodingQuarry_transcript_62105-T1 fails validation. (ATG) TC 116460-116533 GT GGG (ACG) AG 117722-117987 GT CGG (AGA) AG 118593-118678 GG TGG (CAG) TA 118974-119112 GT AGG (GCC) AG 119245-119389 GT AGG (TGG) AG 120651-120770 GT AGG (GTA) AG 120908-121043 GT AGG (GTT) AG 121223-121320 GT AAG (GAT) AG 121451-121562 GT AGG (GTG) AG 121680-121814 CG AAC -recovered CodingQuarry_transcript_62105-T1, initial, 116460, 116533 -recovered CodingQuarry_transcript_62105-T1, terminal, 121680, 121814 -recovered CodingQuarry_transcript_62105-T1, internal, 117722, 117987 -recovered CodingQuarry_transcript_62105-T1, internal, 119245, 119389 -recovered CodingQuarry_transcript_62105-T1, internal, 120651, 120770 -recovered CodingQuarry_transcript_62105-T1, internal, 120908, 121043 -recovered CodingQuarry_transcript_62105-T1, internal, 121223, 121320 -recovered CodingQuarry_transcript_62105-T1, internal, 121451, 121562 Valid prediction for GeneMark_model.39710_t Valid prediction for GeneMark_model.39711_t Valid prediction for GlimmerHMM_glimmerT_23178-T1 Valid prediction for snap_scaffold_9-snap.1920-T1 Couldn't classify 89967, 90008 Sorry, prediction pasa_asmbl_55169.p1 fails validation. (CCT) TC 89967-90008 GT AGG (CTC) AG 90265-90354 GT AGG (TCC) AG 90461-90650 GT AGG (GGA) AG 90766-90925 GT AGG (GTC) AG 91027-91105 GT GTG (GTA) AG 91231-91344 GT AGG (GTC) AG 91464-91628 GT AGG (CTG) AG 91781-91882 AC GAA -recovered pasa_asmbl_55169.p1, terminal, 91781, 91882 -recovered pasa_asmbl_55169.p1, internal, 90265, 90354 -recovered pasa_asmbl_55169.p1, internal, 90461, 90650 -recovered pasa_asmbl_55169.p1, internal, 90766, 90925 -recovered pasa_asmbl_55169.p1, internal, 91027, 91105 -recovered pasa_asmbl_55169.p1, internal, 91231, 91344 -recovered pasa_asmbl_55169.p1, internal, 91464, 91628 Valid prediction for GeneMark_model.39702_t Valid prediction for snap_scaffold_9-snap.1922-T1 Valid prediction for HiQ_model.g15537.t1 Valid prediction for GlimmerHMM_glimmerT_23163-T1 Valid prediction for GeneMark_model.39686_t Valid prediction for snap_scaffold_9-snap.1914-T1 Valid prediction for pasa_asmbl_55191.p1 Valid prediction for CodingQuarry_transcript_62107-T1 Valid prediction for CodingQuarry_transcript_62102-T1 Valid prediction for pasa_asmbl_55160.p1 Valid prediction for GlimmerHMM_glimmerT_23182-T1 Valid prediction for CodingQuarry_transcript_62100-T1 Valid prediction for GlimmerHMM_glimmerT_23173-T1 Valid prediction for snap_scaffold_9-snap.1899-T1 Valid prediction for HiQ_model.g15533.t1 Valid prediction for snap_scaffold_9-snap.1915-T1 Valid prediction for snap_scaffold_9-snap.1929-T1 Valid prediction for pasa_asmbl_55154.p1 Valid prediction for GeneMark_model.39699_t Valid prediction for HiQ_model.g15521.t1 Couldn't classify 98335, 98388 Sorry, prediction pasa_asmbl_55167.p2 fails validation. (CGG) TA 98335-98388 GT ACG (ACA) AG 98677-98940 CA AAC -recovered pasa_asmbl_55167.p2, terminal, 98677, 98940 Valid prediction for GeneMark_model.39695_t Valid prediction for Augustus_model.g15523.t1 Couldn't classify 95806, 95849 Couldn't classify 97904, 98040 Sorry, prediction pasa_asmbl_55168.p1 fails validation. (GCA) TG 95806-95849 GT CGG (GAG) AG 95959-96075 GT AGG (GTA) AG 96725-96960 GT TGG (GTG) AG 97045-97158 GT AGG (GTG) AG 97408-97520 GT GGG (GCC) AG 97622-97730 GT GGG (GTC) AG 97904-98040 AT CCA -recovered pasa_asmbl_55168.p1, internal, 95959, 96075 -recovered pasa_asmbl_55168.p1, internal, 96725, 96960 -recovered pasa_asmbl_55168.p1, internal, 97045, 97158 -recovered pasa_asmbl_55168.p1, internal, 97408, 97520 -recovered pasa_asmbl_55168.p1, internal, 97622, 97730 Valid prediction for GlimmerHMM_glimmerT_23187-T1 Valid prediction for GlimmerHMM_glimmerT_23185-T1 Valid prediction for GeneMark_model.39691_t Valid prediction for GeneMark_model.39690_t Valid prediction for GlimmerHMM_glimmerT_23165-T1 Valid prediction for GeneMark_model.39680_t Couldn't classify 216133, 216225 Sorry, prediction pasa_asmbl_55142.p1 fails validation. (ATG) AC 213311-213320 GT TGG (GTT) AG 214665-214862 GT AGG (GGA) AG 215111-215220 GT AGG (GTG) AG 215689-215830 GT TGG (AGA) AG 215958-216046 GT AGG (CTG) AG 216133-216225 GT AGG -recovered pasa_asmbl_55142.p1, initial, 213311, 213320 -recovered pasa_asmbl_55142.p1, internal, 214665, 214862 -recovered pasa_asmbl_55142.p1, internal, 215111, 215220 -recovered pasa_asmbl_55142.p1, internal, 215689, 215830 -recovered pasa_asmbl_55142.p1, internal, 215958, 216046 -recovered pasa_asmbl_55142.p1, internal, 216133, 216225 Valid prediction for GlimmerHMM_glimmerT_23184-T1 Valid prediction for snap_scaffold_9-snap.1896-T1 Valid prediction for snap_scaffold_9-snap.1910-T1 Valid prediction for Augustus_model.g15525.t1 Valid prediction for Augustus_model.g15514.t1 Valid prediction for CodingQuarry_transcript_62111-T1 Valid prediction for snap_scaffold_9-snap.1919-T1 Valid prediction for GeneMark_model.39713_t Valid prediction for pasa_asmbl_55155.p1 Valid prediction for snap_scaffold_9-snap.1904-T1 Valid prediction for GlimmerHMM_glimmerT_23181-T1 Valid prediction for GlimmerHMM_glimmerT_23179-T1 Valid prediction for snap_scaffold_9-snap.1911-T1 Valid prediction for Augustus_model.g15528.t1 Valid prediction for CodingQuarry_transcript_62098-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 15359, rend_intergenic: 11802 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29302, rend_intergenic: 25656 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31213, rend_intergenic: 29634 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 39638, rend_intergenic: 31500 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43185, rend_intergenic: 40010 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62447, rend_intergenic: 50680 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67416, rend_intergenic: 64923 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72362, rend_intergenic: 70099 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82036, rend_intergenic: 73884 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 87990, rend_intergenic: 85451 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 92284, rend_intergenic: 90070 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 104998, rend_intergenic: 104167 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 154736, rend_intergenic: 145973 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 174664, rend_intergenic: 169695 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 257731 -exon list size: 951 building trellis 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.1 3.3 3.4 3.5 3.6 3.7 3.8 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.2 5.4 5.5 5.6 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.8 6.9 7.0 7.1 7.2 7.3 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.1 9.2 9.3 9.4 9.5 9.7 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.3 11.4 11.5 11.6 11.8 11.9 12.0 12.1 12.2 12.3 12.4 12.5 12.6 12.7 12.8 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 13.9 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.8 15.9 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.6 17.7 17.8 17.9 18.0 18.2 18.3 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.3 20.4 20.5 20.6 20.7 20.8 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.4 22.5 22.6 22.7 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.2 24.3 24.4 24.6 24.7 24.8 24.9 25.0 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.2 26.3 26.4 26.5 26.7 26.8 26.9 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.5 28.6 28.8 28.9 29.0 29.1 29.2 29.3 29.4 29.5 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.6 30.7 30.8 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.9 32.0 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.8 32.9 33.1 33.2 33.3 33.4 33.5 33.6 33.7 33.8 33.9 34.0 34.1 34.2 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.2 35.3 35.4 35.5 35.6 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.3 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.1 38.2 38.3 38.4 38.5 38.6 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.5 39.6 39.7 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.3 41.4 41.6 41.7 41.8 41.9 42.0 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.8 42.9 43.0 43.1 43.2 43.3 43.4 43.5 43.7 43.8 43.9 44.0 44.1 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.8 45.9 46.0 46.1 46.2 46.3 46.4 46.5 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.4 47.5 47.6 47.7 47.8 48.0 48.1 48.2 48.3 48.4 48.5 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.5 51.6 51.7 51.8 51.9 52.0 52.2 52.3 52.4 52.5 52.6 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.5 53.6 53.7 53.8 53.9 54.0 54.1 54.2 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.9 56.0 56.1 56.2 56.3 56.5 56.6 56.7 56.8 56.9 57.0 57.1 57.2 57.3 57.4 57.5 57.6 57.7 57.8 57.9 58.0 58.1 58.2 58.3 58.4 58.6 58.7 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.3 60.4 60.5 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.4 61.5 61.6 61.7 61.8 61.9 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.4 64.5 64.6 64.7 64.8 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.8 65.9 66.0 66.1 66.2 66.3 66.4 66.5 66.6 66.7 66.8 66.9 67.1 67.2 67.3 67.4 67.5 67.6 67.7 67.8 67.9 68.0 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.2 69.3 69.4 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.5 70.6 70.7 70.8 70.9 71.0 71.1 71.2 71.4 71.5 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.1 73.2 73.3 73.5 73.6 73.7 73.8 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.0 75.1 75.2 75.3 75.4 75.6 75.7 75.8 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.3 77.4 77.5 77.6 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.2 79.3 79.4 79.5 79.6 79.7 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.9 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.7 81.8 82.0 82.1 82.2 82.3 82.4 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.1 84.2 84.3 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.1 86.3 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.2 87.3 87.4 87.5 87.6 87.7 87.8 87.9 88.0 88.1 88.2 88.4 88.5 88.6 88.7 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.3 90.5 90.6 90.7 90.8 90.9 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.8 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.7 92.8 92.9 93.0 93.1 93.2 93.3 93.4 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.4 94.5 94.6 94.8 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.2 96.3 96.4 96.5 96.6 96.7 96.9 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.7 97.8 97.9 98.0 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.8 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.7 99.8 99.9 -found 41 predictions from path traversal Error with prediction: snap lend_intergenic: 15359, rend_intergenic: 11802 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29302, rend_intergenic: 25656 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31213, rend_intergenic: 29634 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 39638, rend_intergenic: 31500 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43185, rend_intergenic: 40010 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62447, rend_intergenic: 50680 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67416, rend_intergenic: 64923 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72362, rend_intergenic: 70099 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82036, rend_intergenic: 73884 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 87990, rend_intergenic: 85451 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 92284, rend_intergenic: 90070 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 104998, rend_intergenic: 104167 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 154736, rend_intergenic: 145973 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 174664, rend_intergenic: 169695 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 34 predictions persist after filtering for low support