-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_9/scaffold_9_672744-1040885 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.37499_t Valid prediction for GeneMark_model.37494_t Valid prediction for GeneMark_model.37444_t Valid prediction for GeneMark_model.37442_t Valid prediction for GeneMark_model.37534_t Valid prediction for GeneMark_model.37427_t Valid prediction for GeneMark_model.37425_t Valid prediction for snap_scaffold_9-snap.159-T1 Valid prediction for snap_scaffold_9-snap.167-T1 Valid prediction for snap_scaffold_9-snap.182-T1 Valid prediction for snap_scaffold_9-snap.220-T1 Valid prediction for GeneMark_model.37423_t Valid prediction for GeneMark_model.37474_t Valid prediction for GeneMark_model.37420_t Valid prediction for snap_scaffold_9-snap.163-T1 Valid prediction for GeneMark_model.37521_t Valid prediction for GlimmerHMM_glimmerT_22030-T1 Valid prediction for snap_scaffold_9-snap.212-T1 Valid prediction for GeneMark_model.37493_t Valid prediction for GlimmerHMM_glimmerT_22011-T1 Valid prediction for GlimmerHMM_glimmerT_22006-T1 Valid prediction for GlimmerHMM_glimmerT_22019-T1 Valid prediction for GeneMark_model.37532_t Valid prediction for Augustus_model.g14746.t1 Valid prediction for snap_scaffold_9-snap.178-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for Augustus_model.g14747.t1 Valid prediction for snap_scaffold_9-snap.193-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_22017-T1 Valid prediction for snap_scaffold_9-snap.188-T1 Valid prediction for HiQ_model.g14725.t1 Valid prediction for GeneMark_model.37455_t Valid prediction for snap_scaffold_9-snap.185-T1 Valid prediction for GlimmerHMM_glimmerT_22042-T1 Valid prediction for GeneMark_model.37517_t Valid prediction for GeneMark_model.37529_t Valid prediction for GeneMark_model.37457_t Valid prediction for GeneMark_model.37483_t Valid prediction for GeneMark_model.37448_t Valid prediction for GlimmerHMM_glimmerT_22040-T1 Valid prediction for GeneMark_model.37431_t Valid prediction for GeneMark_model.37484_t Valid prediction for GeneMark_model.37519_t Valid prediction for GeneMark_model.37429_t Valid prediction for GlimmerHMM_glimmerT_22013-T1 Valid prediction for GeneMark_model.37507_t Valid prediction for GeneMark_model.37515_t Valid prediction for GeneMark_model.37440_t Valid prediction for GeneMark_model.37545_t Valid prediction for GeneMark_model.37488_t Valid prediction for snap_scaffold_9-snap.165-T1 Valid prediction for snap_scaffold_9-snap.169-T1 Valid prediction for Augustus_model.g14729.t1 Valid prediction for GeneMark_model.37450_t Valid prediction for snap_scaffold_9-snap.215-T1 Valid prediction for snap_scaffold_9-snap.194-T1 Valid prediction for GlimmerHMM_glimmerT_22036-T1 Valid prediction for snap_scaffold_9-snap.202-T1 Valid prediction for GlimmerHMM_glimmerT_22016-T1 Valid prediction for Augustus_model.g14737.t1 Valid prediction for Augustus_model.g14732.t1 Valid prediction for GeneMark_model.37454_t Valid prediction for GeneMark_model.37464_t Valid prediction for snap_scaffold_9-snap.183-T1 Valid prediction for GeneMark_model.37436_t Valid prediction for GeneMark_model.37453_t Valid prediction for GeneMark_model.37480_t Valid prediction for GlimmerHMM_glimmerT_22018-T1 Valid prediction for GlimmerHMM_glimmerT_22014-T1 Valid prediction for GeneMark_model.37486_t Couldn't classify 34319, 34498 Sorry, prediction pasa_asmbl_53772.p1 fails validation. (TGG) AG 34319-34498 GT AGG (GTG) AG 34803-34921 GT AAG (TGT) AG 35870-35944 GT AAG (ACA) AG 36480-36643 GT GGG (CCA) AG 37312-37376 GT AGG (ATG) AG 38031-38172 GT AGG (GAG) AG 38382-38529 GT AGG (TGA) AG 41052-41223 GT AGG (GAC) AG 42659-42748 GT AGG (GTA) AG 43849-44021 GT CGG (GGC) AG 44437-44560 GT GGG (GTG) AG 44655-44765 TA GAT -recovered pasa_asmbl_53772.p1, initial, 38031, 38172 add_exon() Sorry, pasa_asmbl_53772.p1 38031-38172-terminal-3 is invalid. -recovered pasa_asmbl_53772.p1, terminal, 38031, 38172 -recovered pasa_asmbl_53772.p1, terminal, 44655, 44765 -recovered pasa_asmbl_53772.p1, internal, 34319, 34498 -recovered pasa_asmbl_53772.p1, internal, 34803, 34921 -recovered pasa_asmbl_53772.p1, internal, 35870, 35944 -recovered pasa_asmbl_53772.p1, internal, 36480, 36643 -recovered pasa_asmbl_53772.p1, internal, 37312, 37376 -recovered pasa_asmbl_53772.p1, internal, 38031, 38172 -recovered pasa_asmbl_53772.p1, internal, 38382, 38529 -recovered pasa_asmbl_53772.p1, internal, 41052, 41223 -recovered pasa_asmbl_53772.p1, internal, 42659, 42748 -recovered pasa_asmbl_53772.p1, internal, 43849, 44021 -recovered pasa_asmbl_53772.p1, internal, 44437, 44560 Valid prediction for GeneMark_model.37478_t Valid prediction for snap_scaffold_9-snap.213-T1 Valid prediction for GeneMark_model.37505_t Valid prediction for GeneMark_model.37466_t Valid prediction for GeneMark_model.37434_t Valid prediction for GeneMark_model.37458_t Valid prediction for Augustus_model.g14727.t1 Valid prediction for GeneMark_model.37525_t Valid prediction for GeneMark_model.37527_t Valid prediction for GeneMark_model.37492_t Valid prediction for GeneMark_model.37470_t Valid prediction for snap_scaffold_9-snap.172-T1 Valid prediction for GeneMark_model.37438_t Valid prediction for GeneMark_model.37541_t Valid prediction for GeneMark_model.37497_t Valid prediction for snap_scaffold_9-snap.180-T1 Valid prediction for GeneMark_model.37452_t Valid prediction for GeneMark_model.37422_t Valid prediction for GeneMark_model.37543_t Valid prediction for snap_scaffold_9-snap.207-T1 Valid prediction for GeneMark_model.37536_t Valid prediction for snap_scaffold_9-snap.171-T1 Valid prediction for GeneMark_model.37459_t Valid prediction for snap_scaffold_9-snap.208-T1 Valid prediction for snap_scaffold_9-snap.210-T1 Valid prediction for GeneMark_model.37539_t Valid prediction for snap_scaffold_9-snap.164-T1 Valid prediction for GlimmerHMM_glimmerT_22022-T1 Valid prediction for GlimmerHMM_glimmerT_22037-T1 Valid prediction for Augustus_model.g14724.t1 Valid prediction for GeneMark_model.37481_t Valid prediction for GeneMark_model.37511_t Valid prediction for GeneMark_model.37530_t Valid prediction for GeneMark_model.37472_t Valid prediction for snap_scaffold_9-snap.174-T1 Valid prediction for snap_scaffold_9-snap.197-T1 Valid prediction for GeneMark_model.37523_t Valid prediction for Augustus_model.g14723.t1 Valid prediction for GeneMark_model.37462_t Valid prediction for GeneMark_model.37446_t Valid prediction for Augustus_model.g14749.t1 Valid prediction for GeneMark_model.37469_t Valid prediction for GeneMark_model.37468_t Valid prediction for GlimmerHMM_glimmerT_22035-T1 Valid prediction for GlimmerHMM_glimmerT_22009-T1 Valid prediction for snap_scaffold_9-snap.192-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.37491_t Valid prediction for Augustus_model.g14734.t1 Valid prediction for GeneMark_model.37518_t Valid prediction for snap_scaffold_9-snap.204-T1 Valid prediction for GeneMark_model.37421_t Valid prediction for snap_scaffold_9-snap.176-T1 Valid prediction for snap_scaffold_9-snap.201-T1 Valid prediction for GlimmerHMM_glimmerT_22038-T1 Valid prediction for GeneMark_model.37524_t Valid prediction for GeneMark_model.37501_t Valid prediction for GlimmerHMM_glimmerT_22027-T1 Valid prediction for snap_scaffold_9-snap.219-T1 Valid prediction for GeneMark_model.37460_t Valid prediction for snap_scaffold_9-snap.218-T1 Valid prediction for GlimmerHMM_glimmerT_22007-T1 Valid prediction for GeneMark_model.37495_t Valid prediction for GeneMark_model.37428_t Valid prediction for GeneMark_model.37504_t Valid prediction for GeneMark_model.37496_t Valid prediction for snap_scaffold_9-snap.189-T1 Valid prediction for GeneMark_model.37514_t Valid prediction for GeneMark_model.37544_t Valid prediction for GeneMark_model.37463_t Valid prediction for GeneMark_model.37476_t Valid prediction for GlimmerHMM_glimmerT_22034-T1 Valid prediction for snap_scaffold_9-snap.200-T1 Couldn't classify 286598, 287353 Sorry, prediction pasa_asmbl_54779.p1 fails validation. (CCT) CC 286598-287353 CT AAC Valid prediction for GeneMark_model.37475_t Valid prediction for GeneMark_model.37424_t Valid prediction for Augustus_model.g14748.t1 Valid prediction for GeneMark_model.37432_t Valid prediction for snap_scaffold_9-snap.170-T1 Valid prediction for snap_scaffold_9-snap.181-T1 Valid prediction for GlimmerHMM_glimmerT_22032-T1 Valid prediction for GeneMark_model.37489_t Valid prediction for GlimmerHMM_glimmerT_22012-T1 Valid prediction for GlimmerHMM_glimmerT_22021-T1 Valid prediction for GeneMark_model.37477_t Valid prediction for GeneMark_model.37509_t Valid prediction for snap_scaffold_9-snap.173-T1 Valid prediction for snap_scaffold_9-snap.184-T1 Valid prediction for snap_scaffold_9-snap.186-T1 Valid prediction for Augustus_model.g14739.t1 Valid prediction for Augustus_model.g14730.t1 Valid prediction for snap_scaffold_9-snap.191-T1 Valid prediction for GeneMark_model.37447_t Valid prediction for GlimmerHMM_glimmerT_22026-T1 Valid prediction for GeneMark_model.37467_t Valid prediction for GeneMark_model.37498_t Valid prediction for GeneMark_model.37439_t Valid prediction for CodingQuarry_transcript_61941-T1 Valid prediction for GlimmerHMM_glimmerT_22039-T1 Valid prediction for snap_scaffold_9-snap.205-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for Augustus_model.g14742.t1 Valid prediction for snap_scaffold_9-snap.179-T1 Sorry, intron length (5) is less than minimum required (10) Valid prediction for snap_scaffold_9-snap.195-T1 Valid prediction for GeneMark_model.37500_t Valid prediction for GlimmerHMM_glimmerT_22029-T1 Valid prediction for Augustus_model.g14733.t1 Valid prediction for Augustus_model.g14738.t1 Valid prediction for GeneMark_model.37512_t Valid prediction for Augustus_model.g14743.t1 Valid prediction for GlimmerHMM_glimmerT_22015-T1 Valid prediction for GeneMark_model.37510_t Valid prediction for GeneMark_model.37443_t Couldn't classify 155409, 155506 Sorry, prediction pasa_asmbl_54785.p1 fails validation. (ATG) CC 152333-152435 GT CGG (GTA) AG 152623-152675 GT AGG (GAC) AG 153042-153154 GT AGG (GTT) AG 153525-153567 GT AGG (GTG) AG 153713-153780 GT GGG (GAT) AG 153902-154010 GT TGG (GGC) AG 154421-154523 GT TGG (GTG) AG 155409-155506 GG CAG -recovered pasa_asmbl_54785.p1, initial, 152333, 152435 -recovered pasa_asmbl_54785.p1, internal, 152623, 152675 -recovered pasa_asmbl_54785.p1, internal, 153042, 153154 -recovered pasa_asmbl_54785.p1, internal, 153525, 153567 -recovered pasa_asmbl_54785.p1, internal, 153713, 153780 -recovered pasa_asmbl_54785.p1, internal, 153902, 154010 -recovered pasa_asmbl_54785.p1, internal, 154421, 154523 Valid prediction for GeneMark_model.37535_t Valid prediction for GeneMark_model.37441_t Valid prediction for Augustus_model.g14726.t1 Valid prediction for GeneMark_model.37506_t Valid prediction for snap_scaffold_9-snap.206-T1 Valid prediction for snap_scaffold_9-snap.198-T1 Valid prediction for GlimmerHMM_glimmerT_22024-T1 Valid prediction for GeneMark_model.37445_t Valid prediction for GlimmerHMM_glimmerT_22023-T1 Valid prediction for GeneMark_model.37537_t Valid prediction for GeneMark_model.37435_t Valid prediction for GeneMark_model.37513_t Valid prediction for GeneMark_model.37426_t Valid prediction for GeneMark_model.37526_t Valid prediction for GeneMark_model.37487_t Valid prediction for GlimmerHMM_glimmerT_22025-T1 Valid prediction for Augustus_model.g14744.t1 Valid prediction for GlimmerHMM_glimmerT_22031-T1 Valid prediction for snap_scaffold_9-snap.162-T1 Valid prediction for Augustus_model.g14745.t1 Couldn't classify 243031, 244002 Sorry, prediction pasa_asmbl_54780.p1 fails validation. (ATG) TG 240795-240806 GT CGG (GAC) AG 243031-244002 TG CGT -recovered pasa_asmbl_54780.p1, initial, 240795, 240806 Valid prediction for snap_scaffold_9-snap.161-T1 Valid prediction for snap_scaffold_9-snap.175-T1 Valid prediction for snap_scaffold_9-snap.211-T1 Valid prediction for GeneMark_model.37433_t Valid prediction for GeneMark_model.37449_t Valid prediction for snap_scaffold_9-snap.168-T1 Valid prediction for GeneMark_model.37473_t Valid prediction for snap_scaffold_9-snap.190-T1 Valid prediction for GlimmerHMM_glimmerT_22041-T1 Valid prediction for snap_scaffold_9-snap.196-T1 Valid prediction for snap_scaffold_9-snap.177-T1 Valid prediction for snap_scaffold_9-snap.160-T1 Valid prediction for GeneMark_model.37522_t Valid prediction for GlimmerHMM_glimmerT_22010-T1 Valid prediction for GeneMark_model.37538_t Valid prediction for GlimmerHMM_glimmerT_22020-T1 Valid prediction for snap_scaffold_9-snap.158-T1 Valid prediction for GeneMark_model.37456_t Valid prediction for snap_scaffold_9-snap.216-T1 Couldn't classify 157074, 157129 Sorry, prediction pasa_asmbl_55699.p1 fails validation. (GTG) GG 157074-157129 GT AGG (TAT) AG 157642-157798 GT TGG (TCT) AG 158171-158268 GT TTG (CAT) AG 158485-158597 GT CTG (TGG) AG 158775-158822 GT AGG (GTG) AG 159199-159265 GT GAG (ATG) AG 160536-160539 CA GAC -recovered pasa_asmbl_55699.p1, terminal, 160536, 160539 -recovered pasa_asmbl_55699.p1, internal, 157642, 157798 -recovered pasa_asmbl_55699.p1, internal, 158171, 158268 -recovered pasa_asmbl_55699.p1, internal, 158485, 158597 -recovered pasa_asmbl_55699.p1, internal, 158775, 158822 -recovered pasa_asmbl_55699.p1, internal, 159199, 159265 Valid prediction for snap_scaffold_9-snap.203-T1 Valid prediction for snap_scaffold_9-snap.166-T1 Valid prediction for Augustus_model.g14740.t1 Valid prediction for GlimmerHMM_glimmerT_22008-T1 Valid prediction for Augustus_model.g14728.t1 Valid prediction for GlimmerHMM_glimmerT_22033-T1 Valid prediction for Augustus_model.g14735.t1 Valid prediction for GeneMark_model.37531_t Valid prediction for Augustus_model.g14731.t1 Valid prediction for GeneMark_model.37482_t Valid prediction for snap_scaffold_9-snap.209-T1 Valid prediction for GeneMark_model.37479_t Valid prediction for snap_scaffold_9-snap.199-T1 Valid prediction for Augustus_model.g14736.t1 Valid prediction for Augustus_model.g14741.t1 Valid prediction for GeneMark_model.37503_t Valid prediction for GeneMark_model.37471_t Valid prediction for snap_scaffold_9-snap.187-T1 Valid prediction for GeneMark_model.37451_t Valid prediction for GeneMark_model.37533_t Valid prediction for GeneMark_model.37540_t Valid prediction for GlimmerHMM_glimmerT_22028-T1 Valid prediction for GeneMark_model.37502_t Valid prediction for GeneMark_model.37508_t Valid prediction for GeneMark_model.37485_t Valid prediction for GeneMark_model.37516_t Valid prediction for snap_scaffold_9-snap.214-T1 Valid prediction for GeneMark_model.37465_t Valid prediction for GeneMark_model.37430_t Valid prediction for GeneMark_model.37437_t Valid prediction for snap_scaffold_9-snap.217-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for GeneMark_model.37542_t Valid prediction for GeneMark_model.37520_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 28651, rend_intergenic: 4959 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46389, rend_intergenic: 28945 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52933, rend_intergenic: 50288 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65130, rend_intergenic: 63304 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74639, rend_intergenic: 67184 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 91349, rend_intergenic: 80929 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 112769, rend_intergenic: 93536 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 125148, rend_intergenic: 113938 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 138663, rend_intergenic: 130445 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 140986, rend_intergenic: 139200 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163192, rend_intergenic: 141017 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173517, rend_intergenic: 163260 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 201568, rend_intergenic: 173884 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 215081, rend_intergenic: 207096 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 228558, rend_intergenic: 218025 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 229998, rend_intergenic: 228562 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 242641, rend_intergenic: 239579 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 272783, rend_intergenic: 265555 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 285960, rend_intergenic: 273190 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 291544, rend_intergenic: 286489 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 297084, rend_intergenic: 293758 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 300696, rend_intergenic: 297233 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 310433, rend_intergenic: 300869 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 314396, rend_intergenic: 311951 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 334646, rend_intergenic: 317870 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 342100, rend_intergenic: 336173 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 357121, rend_intergenic: 342138 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 362790, rend_intergenic: 357141 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 368142 -exon list size: 1566 building trellis 0.1 0.1 0.2 0.3 0.3 0.4 0.4 0.5 0.6 0.6 0.7 0.8 0.8 0.9 1.0 1.0 1.1 1.1 1.2 1.3 1.3 1.4 1.5 1.5 1.6 1.7 1.7 1.8 1.8 1.9 2.0 2.0 2.1 2.2 2.2 2.3 2.4 2.4 2.5 2.6 2.6 2.7 2.7 2.8 2.9 2.9 3.0 3.1 3.1 3.2 3.3 3.3 3.4 3.4 3.5 3.6 3.6 3.7 3.8 3.8 3.9 4.0 4.0 4.1 4.1 4.2 4.3 4.3 4.4 4.5 4.5 4.6 4.7 4.7 4.8 4.8 4.9 5.0 5.0 5.1 5.2 5.2 5.3 5.4 5.4 5.5 5.5 5.6 5.7 5.7 5.8 5.9 5.9 6.0 6.1 6.1 6.2 6.2 6.3 6.4 6.4 6.5 6.6 6.6 6.7 6.8 6.8 6.9 7.0 7.0 7.1 7.1 7.2 7.3 7.3 7.4 7.5 7.5 7.6 7.7 7.7 7.8 7.8 7.9 8.0 8.0 8.1 8.2 8.2 8.3 8.4 8.4 8.5 8.5 8.6 8.7 8.7 8.8 8.9 8.9 9.0 9.1 9.1 9.2 9.2 9.3 9.4 9.4 9.5 9.6 9.6 9.7 9.8 9.8 9.9 9.9 10.0 10.1 10.1 10.2 10.3 10.3 10.4 10.5 10.5 10.6 10.7 10.7 10.8 10.8 10.9 11.0 11.0 11.1 11.2 11.2 11.3 11.4 11.4 11.5 11.5 11.6 11.7 11.7 11.8 11.9 11.9 12.0 12.1 12.1 12.2 12.2 12.3 12.4 12.4 12.5 12.6 12.6 12.7 12.8 12.8 12.9 12.9 13.0 13.1 13.1 13.2 13.3 13.3 13.4 13.5 13.5 13.6 13.6 13.7 13.8 13.8 13.9 14.0 14.0 14.1 14.2 14.2 14.3 14.3 14.4 14.5 14.5 14.6 14.7 14.7 14.8 14.9 14.9 15.0 15.1 15.1 15.2 15.2 15.3 15.4 15.4 15.5 15.6 15.6 15.7 15.8 15.8 15.9 15.9 16.0 16.1 16.1 16.2 16.3 16.3 16.4 16.5 16.5 16.6 16.6 16.7 16.8 16.8 16.9 17.0 17.0 17.1 17.2 17.2 17.3 17.3 17.4 17.5 17.5 17.6 17.7 17.7 17.8 17.9 17.9 18.0 18.0 18.1 18.2 18.2 18.3 18.4 18.4 18.5 18.6 18.6 18.7 18.8 18.8 18.9 18.9 19.0 19.1 19.1 19.2 19.3 19.3 19.4 19.5 19.5 19.6 19.6 19.7 19.8 19.8 19.9 20.0 20.0 20.1 20.2 20.2 20.3 20.3 20.4 20.5 20.5 20.6 20.7 20.7 20.8 20.9 20.9 21.0 21.0 21.1 21.2 21.2 21.3 21.4 21.4 21.5 21.6 21.6 21.7 21.7 21.8 21.9 21.9 22.0 22.1 22.1 22.2 22.3 22.3 22.4 22.4 22.5 22.6 22.6 22.7 22.8 22.8 22.9 23.0 23.0 23.1 23.2 23.2 23.3 23.3 23.4 23.5 23.5 23.6 23.7 23.7 23.8 23.9 23.9 24.0 24.0 24.1 24.2 24.2 24.3 24.4 24.4 24.5 24.6 24.6 24.7 24.7 24.8 24.9 24.9 25.0 25.1 25.1 25.2 25.3 25.3 25.4 25.4 25.5 25.6 25.6 25.7 25.8 25.8 25.9 26.0 26.0 26.1 26.1 26.2 26.3 26.3 26.4 26.5 26.5 26.6 26.7 26.7 26.8 26.8 26.9 27.0 27.0 27.1 27.2 27.2 27.3 27.4 27.4 27.5 27.6 27.6 27.7 27.7 27.8 27.9 27.9 28.0 28.1 28.1 28.2 28.3 28.3 28.4 28.4 28.5 28.6 28.6 28.7 28.8 28.8 28.9 29.0 29.0 29.1 29.1 29.2 29.3 29.3 29.4 29.5 29.5 29.6 29.7 29.7 29.8 29.8 29.9 30.0 30.0 30.1 30.2 30.2 30.3 30.4 30.4 30.5 30.5 30.6 30.7 30.7 30.8 30.9 30.9 31.0 31.1 31.1 31.2 31.2 31.3 31.4 31.4 31.5 31.6 31.6 31.7 31.8 31.8 31.9 32.0 32.0 32.1 32.1 32.2 32.3 32.3 32.4 32.5 32.5 32.6 32.7 32.7 32.8 32.8 32.9 33.0 33.0 33.1 33.2 33.2 33.3 33.4 33.4 33.5 33.5 33.6 33.7 33.7 33.8 33.9 33.9 34.0 34.1 34.1 34.2 34.2 34.3 34.4 34.4 34.5 34.6 34.6 34.7 34.8 34.8 34.9 34.9 35.0 35.1 35.1 35.2 35.3 35.3 35.4 35.5 35.5 35.6 35.7 35.7 35.8 35.8 35.9 36.0 36.0 36.1 36.2 36.2 36.3 36.4 36.4 36.5 36.5 36.6 36.7 36.7 36.8 36.9 36.9 37.0 37.1 37.1 37.2 37.2 37.3 37.4 37.4 37.5 37.6 37.6 37.7 37.8 37.8 37.9 37.9 38.0 38.1 38.1 38.2 38.3 38.3 38.4 38.5 38.5 38.6 38.6 38.7 38.8 38.8 38.9 39.0 39.0 39.1 39.2 39.2 39.3 39.3 39.4 39.5 39.5 39.6 39.7 39.7 39.8 39.9 39.9 40.0 40.1 40.1 40.2 40.2 40.3 40.4 40.4 40.5 40.6 40.6 40.7 40.8 40.8 40.9 40.9 41.0 41.1 41.1 41.2 41.3 41.3 41.4 41.5 41.5 41.6 41.6 41.7 41.8 41.8 41.9 42.0 42.0 42.1 42.2 42.2 42.3 42.3 42.4 42.5 42.5 42.6 42.7 42.7 42.8 42.9 42.9 43.0 43.0 43.1 43.2 43.2 43.3 43.4 43.4 43.5 43.6 43.6 43.7 43.8 43.8 43.9 43.9 44.0 44.1 44.1 44.2 44.3 44.3 44.4 44.5 44.5 44.6 44.6 44.7 44.8 44.8 44.9 45.0 45.0 45.1 45.2 45.2 45.3 45.3 45.4 45.5 45.5 45.6 45.7 45.7 45.8 45.9 45.9 46.0 46.0 46.1 46.2 46.2 46.3 46.4 46.4 46.5 46.6 46.6 46.7 46.7 46.8 46.9 46.9 47.0 47.1 47.1 47.2 47.3 47.3 47.4 47.4 47.5 47.6 47.6 47.7 47.8 47.8 47.9 48.0 48.0 48.1 48.2 48.2 48.3 48.3 48.4 48.5 48.5 48.6 48.7 48.7 48.8 48.9 48.9 49.0 49.0 49.1 49.2 49.2 49.3 49.4 49.4 49.5 49.6 49.6 49.7 49.7 49.8 49.9 49.9 50.0 50.1 50.1 50.2 50.3 50.3 50.4 50.4 50.5 50.6 50.6 50.7 50.8 50.8 50.9 51.0 51.0 51.1 51.1 51.2 51.3 51.3 51.4 51.5 51.5 51.6 51.7 51.7 51.8 51.8 51.9 52.0 52.0 52.1 52.2 52.2 52.3 52.4 52.4 52.5 52.6 52.6 52.7 52.7 52.8 52.9 52.9 53.0 53.1 53.1 53.2 53.3 53.3 53.4 53.4 53.5 53.6 53.6 53.7 53.8 53.8 53.9 54.0 54.0 54.1 54.1 54.2 54.3 54.3 54.4 54.5 54.5 54.6 54.7 54.7 54.8 54.8 54.9 55.0 55.0 55.1 55.2 55.2 55.3 55.4 55.4 55.5 55.5 55.6 55.7 55.7 55.8 55.9 55.9 56.0 56.1 56.1 56.2 56.2 56.3 56.4 56.4 56.5 56.6 56.6 56.7 56.8 56.8 56.9 57.0 57.0 57.1 57.1 57.2 57.3 57.3 57.4 57.5 57.5 57.6 57.7 57.7 57.8 57.8 57.9 58.0 58.0 58.1 58.2 58.2 58.3 58.4 58.4 58.5 58.5 58.6 58.7 58.7 58.8 58.9 58.9 59.0 59.1 59.1 59.2 59.2 59.3 59.4 59.4 59.5 59.6 59.6 59.7 59.8 59.8 59.9 59.9 60.0 60.1 60.1 60.2 60.3 60.3 60.4 60.5 60.5 60.6 60.7 60.7 60.8 60.8 60.9 61.0 61.0 61.1 61.2 61.2 61.3 61.4 61.4 61.5 61.5 61.6 61.7 61.7 61.8 61.9 61.9 62.0 62.1 62.1 62.2 62.2 62.3 62.4 62.4 62.5 62.6 62.6 62.7 62.8 62.8 62.9 62.9 63.0 63.1 63.1 63.2 63.3 63.3 63.4 63.5 63.5 63.6 63.6 63.7 63.8 63.8 63.9 64.0 64.0 64.1 64.2 64.2 64.3 64.3 64.4 64.5 64.5 64.6 64.7 64.7 64.8 64.9 64.9 65.0 65.1 65.1 65.2 65.2 65.3 65.4 65.4 65.5 65.6 65.6 65.7 65.8 65.8 65.9 65.9 66.0 66.1 66.1 66.2 66.3 66.3 66.4 66.5 66.5 66.6 66.6 66.7 66.8 66.8 66.9 67.0 67.0 67.1 67.2 67.2 67.3 67.3 67.4 67.5 67.5 67.6 67.7 67.7 67.8 67.9 67.9 68.0 68.0 68.1 68.2 68.2 68.3 68.4 68.4 68.5 68.6 68.6 68.7 68.8 68.8 68.9 68.9 69.0 69.1 69.1 69.2 69.3 69.3 69.4 69.5 69.5 69.6 69.6 69.7 69.8 69.8 69.9 70.0 70.0 70.1 70.2 70.2 70.3 70.3 70.4 70.5 70.5 70.6 70.7 70.7 70.8 70.9 70.9 71.0 71.0 71.1 71.2 71.2 71.3 71.4 71.4 71.5 71.6 71.6 71.7 71.7 71.8 71.9 71.9 72.0 72.1 72.1 72.2 72.3 72.3 72.4 72.4 72.5 72.6 72.6 72.7 72.8 72.8 72.9 73.0 73.0 73.1 73.2 73.2 73.3 73.3 73.4 73.5 73.5 73.6 73.7 73.7 73.8 73.9 73.9 74.0 74.0 74.1 74.2 74.2 74.3 74.4 74.4 74.5 74.6 74.6 74.7 74.7 74.8 74.9 74.9 75.0 75.1 75.1 75.2 75.3 75.3 75.4 75.4 75.5 75.6 75.6 75.7 75.8 75.8 75.9 76.0 76.0 76.1 76.1 76.2 76.3 76.3 76.4 76.5 76.5 76.6 76.7 76.7 76.8 76.8 76.9 77.0 77.0 77.1 77.2 77.2 77.3 77.4 77.4 77.5 77.6 77.6 77.7 77.7 77.8 77.9 77.9 78.0 78.1 78.1 78.2 78.3 78.3 78.4 78.4 78.5 78.6 78.6 78.7 78.8 78.8 78.9 79.0 79.0 79.1 79.1 79.2 79.3 79.3 79.4 79.5 79.5 79.6 79.7 79.7 79.8 79.8 79.9 80.0 80.0 80.1 80.2 80.2 80.3 80.4 80.4 80.5 80.5 80.6 80.7 80.7 80.8 80.9 80.9 81.0 81.1 81.1 81.2 81.2 81.3 81.4 81.4 81.5 81.6 81.6 81.7 81.8 81.8 81.9 82.0 82.0 82.1 82.1 82.2 82.3 82.3 82.4 82.5 82.5 82.6 82.7 82.7 82.8 82.8 82.9 83.0 83.0 83.1 83.2 83.2 83.3 83.4 83.4 83.5 83.5 83.6 83.7 83.7 83.8 83.9 83.9 84.0 84.1 84.1 84.2 84.2 84.3 84.4 84.4 84.5 84.6 84.6 84.7 84.8 84.8 84.9 84.9 85.0 85.1 85.1 85.2 85.3 85.3 85.4 85.5 85.5 85.6 85.7 85.7 85.8 85.8 85.9 86.0 86.0 86.1 86.2 86.2 86.3 86.4 86.4 86.5 86.5 86.6 86.7 86.7 86.8 86.9 86.9 87.0 87.1 87.1 87.2 87.2 87.3 87.4 87.4 87.5 87.6 87.6 87.7 87.8 87.8 87.9 87.9 88.0 88.1 88.1 88.2 88.3 88.3 88.4 88.5 88.5 88.6 88.6 88.7 88.8 88.8 88.9 89.0 89.0 89.1 89.2 89.2 89.3 89.3 89.4 89.5 89.5 89.6 89.7 89.7 89.8 89.9 89.9 90.0 90.1 90.1 90.2 90.2 90.3 90.4 90.4 90.5 90.6 90.6 90.7 90.8 90.8 90.9 90.9 91.0 91.1 91.1 91.2 91.3 91.3 91.4 91.5 91.5 91.6 91.6 91.7 91.8 91.8 91.9 92.0 92.0 92.1 92.2 92.2 92.3 92.3 92.4 92.5 92.5 92.6 92.7 92.7 92.8 92.9 92.9 93.0 93.0 93.1 93.2 93.2 93.3 93.4 93.4 93.5 93.6 93.6 93.7 93.8 93.8 93.9 93.9 94.0 94.1 94.1 94.2 94.3 94.3 94.4 94.5 94.5 94.6 94.6 94.7 94.8 94.8 94.9 95.0 95.0 95.1 95.2 95.2 95.3 95.3 95.4 95.5 95.5 95.6 95.7 95.7 95.8 95.9 95.9 96.0 96.0 96.1 96.2 96.2 96.3 96.4 96.4 96.5 96.6 96.6 96.7 96.7 96.8 96.9 96.9 97.0 97.1 97.1 97.2 97.3 97.3 97.4 97.4 97.5 97.6 97.6 97.7 97.8 97.8 97.9 98.0 98.0 98.1 98.2 98.2 98.3 98.3 98.4 98.5 98.5 98.6 98.7 98.7 98.8 98.9 98.9 99.0 99.0 99.1 99.2 99.2 99.3 99.4 99.4 99.5 99.6 99.6 99.7 99.7 99.8 99.9 99.9 -found 92 predictions from path traversal Error with prediction: snap lend_intergenic: 28651, rend_intergenic: 4959 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46389, rend_intergenic: 28945 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52933, rend_intergenic: 50288 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65130, rend_intergenic: 63304 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74639, rend_intergenic: 67184 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 91349, rend_intergenic: 80929 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 112769, rend_intergenic: 93536 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 125148, rend_intergenic: 113938 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 138663, rend_intergenic: 130445 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 140986, rend_intergenic: 139200 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163192, rend_intergenic: 141017 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173517, rend_intergenic: 163260 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 201568, rend_intergenic: 173884 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 215081, rend_intergenic: 207096 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 228558, rend_intergenic: 218025 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 229998, rend_intergenic: 228562 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 242641, rend_intergenic: 239579 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 272783, rend_intergenic: 265555 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 285960, rend_intergenic: 273190 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 291544, rend_intergenic: 286489 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 297084, rend_intergenic: 293758 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 300696, rend_intergenic: 297233 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 310433, rend_intergenic: 300869 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 314396, rend_intergenic: 311951 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 334646, rend_intergenic: 317870 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 342100, rend_intergenic: 336173 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 357121, rend_intergenic: 342138 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 362790, rend_intergenic: 357141 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 35 predictions persist after filtering for low support