-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_9/scaffold_9_4492416-4834093

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.38730_t
Valid prediction for GeneMark_model.38653_t
Valid prediction for GlimmerHMM_glimmerT_22495-T1
Valid prediction for GeneMark_model.38683_t
Valid prediction for snap_scaffold_9-snap.979-T1
Valid prediction for snap_scaffold_9-snap.992-T1
Valid prediction for GeneMark_model.38722_t
Valid prediction for snap_scaffold_9-snap.978-T1
Valid prediction for snap_scaffold_9-snap.970-T1
Valid prediction for snap_scaffold_9-snap.1000-T1
Valid prediction for GeneMark_model.38663_t
Valid prediction for GeneMark_model.38648_t
Valid prediction for snap_scaffold_9-snap.973-T1
Valid prediction for GeneMark_model.38707_t
Valid prediction for GlimmerHMM_glimmerT_22503-T1
Valid prediction for GlimmerHMM_glimmerT_22514-T1
Valid prediction for snap_scaffold_9-snap.964-T1
Valid prediction for snap_scaffold_9-snap.969-T1
Valid prediction for Augustus_model.g15054.t1
Couldn't classify 296235, 296319
Sorry, prediction pasa_asmbl_53937.p1 fails validation.
(ATG)	 GC	294545-294661	GT	AGG
(AAG)	 AG	294946-295052	GT	GTG
(GTA)	 AG	296235-296319	CT	CCC
-recovered pasa_asmbl_53937.p1, initial, 294545, 294661
-recovered pasa_asmbl_53937.p1, internal, 294946, 295052
Couldn't classify 334213, 334243
Sorry, prediction pasa_asmbl_53939.p1 fails validation.
(TTT)	 AT	334213-334243	GT	AGG
(ATG)	 AG	334363-334568	GT	CAG
(GTT)	 AG	334723-334871	GT	AGG
(GAG)	 AG	335376-335508	CC	GAC
add_exon() Sorry, pasa_asmbl_53939.p1 334363-334568-initial-1 is invalid.
-recovered pasa_asmbl_53939.p1, initial, 334363, 334568
-recovered pasa_asmbl_53939.p1, terminal, 335376, 335508
-recovered pasa_asmbl_53939.p1, internal, 334363, 334568
-recovered pasa_asmbl_53939.p1, internal, 334723, 334871
Valid prediction for Augustus_model.g15056.t1
Valid prediction for GlimmerHMM_glimmerT_22527-T1
Valid prediction for GeneMark_model.38668_t
Valid prediction for GeneMark_model.38709_t
Valid prediction for snap_scaffold_9-snap.971-T1
Valid prediction for GlimmerHMM_glimmerT_22522-T1
Valid prediction for GeneMark_model.38638_t
Valid prediction for GeneMark_model.38690_t
Valid prediction for snap_scaffold_9-snap.975-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_9-snap.968-T1
Valid prediction for GlimmerHMM_glimmerT_22515-T1
Valid prediction for GeneMark_model.38655_t
Valid prediction for Augustus_model.g15063.t1
Valid prediction for CodingQuarry_transcript_61997-T1
Valid prediction for GeneMark_model.38731_t
Valid prediction for GeneMark_model.38642_t
Valid prediction for GeneMark_model.38726_t
Valid prediction for GeneMark_model.38716_t
Valid prediction for GlimmerHMM_glimmerT_22530-T1
Valid prediction for GeneMark_model.38674_t
Valid prediction for snap_scaffold_9-snap.995-T1
Valid prediction for snap_scaffold_9-snap.981-T1
Valid prediction for GeneMark_model.38689_t
Valid prediction for GeneMark_model.38644_t
Valid prediction for snap_scaffold_9-snap.987-T1
Valid prediction for GlimmerHMM_glimmerT_22509-T1
Valid prediction for snap_scaffold_9-snap.1012-T1
Couldn't classify 180918, 181093
Couldn't classify 182403, 183051
Sorry, prediction pasa_asmbl_53934.p1 fails validation.
(CCC)	 CC	180918-181093	GT	TGG
(GTG)	 AG	182403-183051	GA	ACG
Valid prediction for GlimmerHMM_glimmerT_22493-T1
Valid prediction for GeneMark_model.38717_t
Valid prediction for snap_scaffold_9-snap.1003-T1
Valid prediction for GeneMark_model.38720_t
Valid prediction for GlimmerHMM_glimmerT_22535-T1
Valid prediction for snap_scaffold_9-snap.998-T1
Valid prediction for GeneMark_model.38661_t
Valid prediction for GeneMark_model.38635_t
Valid prediction for Augustus_model.g15067.t1
Valid prediction for GeneMark_model.38657_t
Valid prediction for GeneMark_model.38681_t
Valid prediction for GlimmerHMM_glimmerT_22519-T1
Valid prediction for GeneMark_model.38736_t
Valid prediction for GlimmerHMM_glimmerT_22504-T1
Valid prediction for snap_scaffold_9-snap.1001-T1
Valid prediction for GeneMark_model.38714_t
Valid prediction for GeneMark_model.38705_t
Valid prediction for GlimmerHMM_glimmerT_22513-T1
Valid prediction for GeneMark_model.38650_t
Valid prediction for GeneMark_model.38659_t
Valid prediction for snap_scaffold_9-snap.994-T1
Valid prediction for GeneMark_model.38671_t
Valid prediction for GeneMark_model.38643_t
Valid prediction for snap_scaffold_9-snap.985-T1
Valid prediction for GlimmerHMM_glimmerT_22512-T1
Valid prediction for snap_scaffold_9-snap.1022-T1
Valid prediction for GlimmerHMM_glimmerT_22521-T1
Valid prediction for snap_scaffold_9-snap.997-T1
Valid prediction for snap_scaffold_9-snap.1020-T1
Valid prediction for GeneMark_model.38741_t
Valid prediction for snap_scaffold_9-snap.965-T1
Valid prediction for GeneMark_model.38710_t
Valid prediction for GeneMark_model.38676_t
Valid prediction for GlimmerHMM_glimmerT_22496-T1
Valid prediction for snap_scaffold_9-snap.983-T1
Valid prediction for GeneMark_model.38724_t
Valid prediction for Augustus_model.g15072.t1
Valid prediction for GeneMark_model.38698_t
Valid prediction for snap_scaffold_9-snap.1008-T1
Valid prediction for Augustus_model.g15065.t1
Valid prediction for GeneMark_model.38693_t
Valid prediction for Augustus_model.g15069.t1
Valid prediction for snap_scaffold_9-snap.1015-T1
Valid prediction for pasa_asmbl_53933.p1
Valid prediction for GlimmerHMM_glimmerT_22532-T1
Valid prediction for snap_scaffold_9-snap.967-T1
Valid prediction for GeneMark_model.38691_t
Valid prediction for Augustus_model.g15049.t1
Valid prediction for GeneMark_model.38640_t
Valid prediction for snap_scaffold_9-snap.1018-T1
Valid prediction for GlimmerHMM_glimmerT_22507-T1
Valid prediction for GeneMark_model.38666_t
Valid prediction for CodingQuarry_transcript_61993-T1
Valid prediction for GeneMark_model.38733_t
Valid prediction for snap_scaffold_9-snap.1005-T1
Valid prediction for snap_scaffold_9-snap.990-T1
Valid prediction for GlimmerHMM_glimmerT_22506-T1
Valid prediction for GlimmerHMM_glimmerT_22502-T1
Valid prediction for GeneMark_model.38702_t
Couldn't classify 126309, 126459
Sorry, prediction pasa_asmbl_53931.p1 fails validation.
(CCG)	 AT	126309-126459	GT	AGG
(CTG)	 AG	127036-127317	GT	CTG
(GCC)	 AG	127500-127590	GT	AGG
(ATG)	 AG	127860-127905	AC	AGA
-recovered pasa_asmbl_53931.p1, terminal, 127860, 127905
-recovered pasa_asmbl_53931.p1, internal, 127036, 127317
-recovered pasa_asmbl_53931.p1, internal, 127500, 127590
Valid prediction for snap_scaffold_9-snap.976-T1
Valid prediction for GeneMark_model.38678_t
Valid prediction for GlimmerHMM_glimmerT_22497-T1
Valid prediction for GeneMark_model.38669_t
Valid prediction for GeneMark_model.38739_t
Valid prediction for GeneMark_model.38734_t
Valid prediction for GeneMark_model.38646_t
Valid prediction for GeneMark_model.38656_t
Valid prediction for GeneMark_model.38700_t
Valid prediction for GeneMark_model.38695_t
Valid prediction for GlimmerHMM_glimmerT_22525-T1
Valid prediction for Augustus_model.g15047.t1
Valid prediction for snap_scaffold_9-snap.972-T1
Valid prediction for GeneMark_model.38685_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_9-snap.984-T1
Valid prediction for snap_scaffold_9-snap.1009-T1
Valid prediction for Augustus_model.g15051.t1
Valid prediction for GeneMark_model.38712_t
Valid prediction for Augustus_model.g15055.t1
Valid prediction for Augustus_model.g15058.t1
Valid prediction for GlimmerHMM_glimmerT_22498-T1
Valid prediction for GeneMark_model.38694_t
Valid prediction for GeneMark_model.38703_t
Valid prediction for snap_scaffold_9-snap.974-T1
Valid prediction for GlimmerHMM_glimmerT_22536-T1
Valid prediction for snap_scaffold_9-snap.1004-T1
Valid prediction for snap_scaffold_9-snap.1006-T1
Valid prediction for GeneMark_model.38721_t
Valid prediction for snap_scaffold_9-snap.1010-T1
Valid prediction for GeneMark_model.38719_t
Valid prediction for Augustus_model.g15048.t1
Valid prediction for snap_scaffold_9-snap.1014-T1
Valid prediction for GeneMark_model.38636_t
Valid prediction for snap_scaffold_9-snap.1007-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GeneMark_model.38725_t
Valid prediction for HiQ_model.g15059.t1
Valid prediction for GeneMark_model.38667_t
Valid prediction for GeneMark_model.38645_t
Valid prediction for snap_scaffold_9-snap.1013-T1
Valid prediction for GeneMark_model.38742_t
Valid prediction for GeneMark_model.38662_t
Valid prediction for GeneMark_model.38672_t
Valid prediction for snap_scaffold_9-snap.1021-T1
Valid prediction for GlimmerHMM_glimmerT_22524-T1
Valid prediction for GlimmerHMM_glimmerT_22500-T1
Valid prediction for GeneMark_model.38732_t
Valid prediction for Augustus_model.g15062.t1
Valid prediction for GeneMark_model.38723_t
Valid prediction for GeneMark_model.38641_t
Valid prediction for GeneMark_model.38715_t
Valid prediction for GeneMark_model.38660_t
Valid prediction for GlimmerHMM_glimmerT_22499-T1
Valid prediction for snap_scaffold_9-snap.1002-T1
Valid prediction for GeneMark_model.38652_t
Valid prediction for Augustus_model.g15068.t1
Valid prediction for GeneMark_model.38677_t
Valid prediction for GeneMark_model.38701_t
Valid prediction for snap_scaffold_9-snap.1019-T1
Valid prediction for Augustus_model.g15066.t1
Valid prediction for snap_scaffold_9-snap.986-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for Augustus_model.g15064.t1
Valid prediction for Augustus_model.g15061.t1
Valid prediction for GlimmerHMM_glimmerT_22533-T1
Valid prediction for GeneMark_model.38718_t
Valid prediction for GeneMark_model.38637_t
Valid prediction for Augustus_model.g15053.t1
Valid prediction for GeneMark_model.38699_t
Valid prediction for Augustus_model.g15071.t1
Valid prediction for snap_scaffold_9-snap.980-T1
Valid prediction for snap_scaffold_9-snap.982-T1
Valid prediction for GeneMark_model.38658_t
Valid prediction for GeneMark_model.38737_t
Valid prediction for CodingQuarry_transcript_61996-T1
Valid prediction for GeneMark_model.38686_t
Valid prediction for pasa_asmbl_54933.p1
Valid prediction for GlimmerHMM_glimmerT_22516-T1
Valid prediction for Augustus_model.g15057.t1
Valid prediction for GeneMark_model.38713_t
Valid prediction for HiQ_model.g15070.t1
Valid prediction for GlimmerHMM_glimmerT_22505-T1
Valid prediction for GeneMark_model.38654_t
Valid prediction for pasa_asmbl_55759.p1
Valid prediction for snap_scaffold_9-snap.1017-T1
Valid prediction for GeneMark_model.38743_t
Valid prediction for GeneMark_model.38735_t
Valid prediction for snap_scaffold_9-snap.1023-T1
Valid prediction for snap_scaffold_9-snap.999-T1
Valid prediction for GeneMark_model.38647_t
Valid prediction for GlimmerHMM_glimmerT_22510-T1
Valid prediction for GeneMark_model.38651_t
Valid prediction for GeneMark_model.38679_t
Valid prediction for Augustus_model.g15052.t1
Valid prediction for snap_scaffold_9-snap.988-T1
Valid prediction for GlimmerHMM_glimmerT_22523-T1
Valid prediction for GeneMark_model.38708_t
Valid prediction for GeneMark_model.38729_t
Valid prediction for GeneMark_model.38680_t
Valid prediction for CodingQuarry_transcript_61998-T1
Valid prediction for GeneMark_model.38738_t
Couldn't classify 302748, 302861
Couldn't classify 304520, 304729
Sorry, prediction pasa_asmbl_54929.p1 fails validation.
(ATC)	 TG	302748-302861	GT	AGG
(GGC)	 AG	304520-304729	GT	AGG
-recovered pasa_asmbl_54929.p1, internal, 304520, 304729
Valid prediction for GeneMark_model.38688_t
Valid prediction for GeneMark_model.38711_t
Valid prediction for Augustus_model.g15050.t1
Valid prediction for snap_scaffold_9-snap.977-T1
Valid prediction for GlimmerHMM_glimmerT_22534-T1
Valid prediction for GeneMark_model.38692_t
Valid prediction for GlimmerHMM_glimmerT_22531-T1
Valid prediction for GeneMark_model.38675_t
Valid prediction for CodingQuarry_transcript_61994-T1
Valid prediction for GlimmerHMM_glimmerT_22508-T1
Valid prediction for GeneMark_model.38670_t
Valid prediction for GeneMark_model.38696_t
Valid prediction for pasa_asmbl_54937.p1
Valid prediction for snap_scaffold_9-snap.991-T1
Valid prediction for GlimmerHMM_glimmerT_22526-T1
Valid prediction for GlimmerHMM_glimmerT_22501-T1
Valid prediction for GeneMark_model.38704_t
Valid prediction for GlimmerHMM_glimmerT_22511-T1
Valid prediction for snap_scaffold_9-snap.1016-T1
Valid prediction for GeneMark_model.38673_t
Valid prediction for GeneMark_model.38639_t
Valid prediction for GeneMark_model.38684_t
Valid prediction for GeneMark_model.38697_t
Valid prediction for snap_scaffold_9-snap.963-T1
Valid prediction for snap_scaffold_9-snap.996-T1
Valid prediction for HiQ_model.g15073.t1
Valid prediction for GeneMark_model.38740_t
Valid prediction for GlimmerHMM_glimmerT_22529-T1
Valid prediction for GeneMark_model.38665_t
Valid prediction for GlimmerHMM_glimmerT_22520-T1
Valid prediction for GlimmerHMM_glimmerT_22528-T1
Valid prediction for GeneMark_model.38682_t
Valid prediction for GlimmerHMM_glimmerT_22494-T1
Valid prediction for snap_scaffold_9-snap.989-T1
Valid prediction for GeneMark_model.38664_t
Valid prediction for GeneMark_model.38728_t
Valid prediction for snap_scaffold_9-snap.966-T1
Valid prediction for GeneMark_model.38649_t
Valid prediction for GlimmerHMM_glimmerT_22518-T1
Valid prediction for snap_scaffold_9-snap.993-T1
Valid prediction for GlimmerHMM_glimmerT_22517-T1
Valid prediction for Augustus_model.g15060.t1
Valid prediction for snap_scaffold_9-snap.1011-T1
Valid prediction for GeneMark_model.38706_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 15461, rend_intergenic: 2916  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23190, rend_intergenic: 19027  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 83896, rend_intergenic: 23234  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92912, rend_intergenic: 84146  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122051, rend_intergenic: 92956  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135657, rend_intergenic: 129484  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142235, rend_intergenic: 135782  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169146, rend_intergenic: 144590  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175263, rend_intergenic: 171017  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177890, rend_intergenic: 175966  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 183066, rend_intergenic: 178382  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198706, rend_intergenic: 192389  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206498, rend_intergenic: 200211  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207907, rend_intergenic: 207104  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 212858, rend_intergenic: 208735  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217544, rend_intergenic: 214243  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232141, rend_intergenic: 224715  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 238835, rend_intergenic: 232470  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 243940, rend_intergenic: 239043  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 251581, rend_intergenic: 243946  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 254344, rend_intergenic: 254246  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 257688, rend_intergenic: 256244  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 268787, rend_intergenic: 258250  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 286094, rend_intergenic: 282498  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 306958, rend_intergenic: 293889  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 311576, rend_intergenic: 310132  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 317192, rend_intergenic: 312273  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 323223, rend_intergenic: 319424  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 331476, rend_intergenic: 325612  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 341678
-exon list size: 1587


building trellis

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15.1    
15.2    
15.2    
15.3    
15.4    
15.4    
15.5    
15.5    
15.6    
15.7    
15.7    
15.8    
15.9    
15.9    
16.0    
16.0    
16.1    
16.2    
16.2    
16.3    
16.4    
16.4    
16.5    
16.6    
16.6    
16.7    
16.7    
16.8    
16.9    
16.9    
17.0    
17.1    
17.1    
17.2    
17.2    
17.3    
17.4    
17.4    
17.5    
17.6    
17.6    
17.7    
17.7    
17.8    
17.9    
17.9    
18.0    
18.1    
18.1    
18.2    
18.3    
18.3    
18.4    
18.4    
18.5    
18.6    
18.6    
18.7    
18.8    
18.8    
18.9    
18.9    
19.0    
19.1    
19.1    
19.2    
19.3    
19.3    
19.4    
19.4    
19.5    
19.6    
19.6    
19.7    
19.8    
19.8    
19.9    
19.9    
20.0    
20.1    
20.1    
20.2    
20.3    
20.3    
20.4    
20.5    
20.5    
20.6    
20.6    
20.7    
20.8    
20.8    
20.9    
21.0    
21.0    
21.1    
21.1    
21.2    
21.3    
21.3    
21.4    
21.5    
21.5    
21.6    
21.6    
21.7    
21.8    
21.8    
21.9    
22.0    
22.0    
22.1    
22.2    
22.2    
22.3    
22.3    
22.4    
22.5    
22.5    
22.6    
22.7    
22.7    
22.8    
22.8    
22.9    
23.0    
23.0    
23.1    
23.2    
23.2    
23.3    
23.3    
23.4    
23.5    
23.5    
23.6    
23.7    
23.7    
23.8    
23.9    
23.9    
24.0    
24.0    
24.1    
24.2    
24.2    
24.3    
24.4    
24.4    
24.5    
24.5    
24.6    
24.7    
24.7    
24.8    
24.9    
24.9    
25.0    
25.0    
25.1    
25.2    
25.2    
25.3    
25.4    
25.4    
25.5    
25.6    
25.6    
25.7    
25.7    
25.8    
25.9    
25.9    
26.0    
26.1    
26.1    
26.2    
26.2    
26.3    
26.4    
26.4    
26.5    
26.6    
26.6    
26.7    
26.7    
26.8    
26.9    
26.9    
27.0    
27.1    
27.1    
27.2    
27.2    
27.3    
27.4    
27.4    
27.5    
27.6    
27.6    
27.7    
27.8    
27.8    
27.9    
27.9    
28.0    
28.1    
28.1    
28.2    
28.3    
28.3    
28.4    
28.4    
28.5    
28.6    
28.6    
28.7    
28.8    
28.8    
28.9    
28.9    
29.0    
29.1    
29.1    
29.2    
29.3    
29.3    
29.4    
29.5    
29.5    
29.6    
29.6    
29.7    
29.8    
29.8    
29.9    
30.0    
30.0    
30.1    
30.1    
30.2    
30.3    
30.3    
30.4    
30.5    
30.5    
30.6    
30.6    
30.7    
30.8    
30.8    
30.9    
31.0    
31.0    
31.1    
31.2    
31.2    
31.3    
31.3    
31.4    
31.5    
31.5    
31.6    
31.7    
31.7    
31.8    
31.8    
31.9    
32.0    
32.0    
32.1    
32.2    
32.2    
32.3    
32.3    
32.4    
32.5    
32.5    
32.6    
32.7    
32.7    
32.8    
32.9    
32.9    
33.0    
33.0    
33.1    
33.2    
33.2    
33.3    
33.4    
33.4    
33.5    
33.5    
33.6    
33.7    
33.7    
33.8    
33.9    
33.9    
34.0    
34.0    
34.1    
34.2    
34.2    
34.3    
34.4    
34.4    
34.5    
34.6    
34.6    
34.7    
34.7    
34.8    
34.9    
34.9    
35.0    
35.1    
35.1    
35.2    
35.2    
35.3    
35.4    
35.4    
35.5    
35.6    
35.6    
35.7    
35.7    
35.8    
35.9    
35.9    
36.0    
36.1    
36.1    
36.2    
36.2    
36.3    
36.4    
36.4    
36.5    
36.6    
36.6    
36.7    
36.8    
36.8    
36.9    
36.9    
37.0    
37.1    
37.1    
37.2    
37.3    
37.3    
37.4    
37.4    
37.5    
37.6    
37.6    
37.7    
37.8    
37.8    
37.9    
37.9    
38.0    
38.1    
38.1    
38.2    
38.3    
38.3    
38.4    
38.5    
38.5    
38.6    
38.6    
38.7    
38.8    
38.8    
38.9    
39.0    
39.0    
39.1    
39.1    
39.2    
39.3    
39.3    
39.4    
39.5    
39.5    
39.6    
39.6    
39.7    
39.8    
39.8    
39.9    
40.0    
40.0    
40.1    
40.2    
40.2    
40.3    
40.3    
40.4    
40.5    
40.5    
40.6    
40.7    
40.7    
40.8    
40.8    
40.9    
41.0    
41.0    
41.1    
41.2    
41.2    
41.3    
41.3    
41.4    
41.5    
41.5    
41.6    
41.7    
41.7    
41.8    
41.9    
41.9    
42.0    
42.0    
42.1    
42.2    
42.2    
42.3    
42.4    
42.4    
42.5    
42.5    
42.6    
42.7    
42.7    
42.8    
42.9    
42.9    
43.0    
43.0    
43.1    
43.2    
43.2    
43.3    
43.4    
43.4    
43.5    
43.5    
43.6    
43.7    
43.7    
43.8    
43.9    
43.9    
44.0    
44.1    
44.1    
44.2    
44.2    
44.3    
44.4    
44.4    
44.5    
44.6    
44.6    
44.7    
44.7    
44.8    
44.9    
44.9    
45.0    
45.1    
45.1    
45.2    
45.2    
45.3    
45.4    
45.4    
45.5    
45.6    
45.6    
45.7    
45.8    
45.8    
45.9    
45.9    
46.0    
46.1    
46.1    
46.2    
46.3    
46.3    
46.4    
46.4    
46.5    
46.6    
46.6    
46.7    
46.8    
46.8    
46.9    
46.9    
47.0    
47.1    
47.1    
47.2    
47.3    
47.3    
47.4    
47.5    
47.5    
47.6    
47.6    
47.7    
47.8    
47.8    
47.9    
48.0    
48.0    
48.1    
48.1    
48.2    
48.3    
48.3    
48.4    
48.5    
48.5    
48.6    
48.6    
48.7    
48.8    
48.8    
48.9    
49.0    
49.0    
49.1    
49.2    
49.2    
49.3    
49.3    
49.4    
49.5    
49.5    
49.6    
49.7    
49.7    
49.8    
49.8    
49.9    
50.0    
50.0    
50.1    
50.2    
50.2    
50.3    
50.3    
50.4    
50.5    
50.5    
50.6    
50.7    
50.7    
50.8    
50.8    
50.9    
51.0    
51.0    
51.1    
51.2    
51.2    
51.3    
51.4    
51.4    
51.5    
51.5    
51.6    
51.7    
51.7    
51.8    
51.9    
51.9    
52.0    
52.0    
52.1    
52.2    
52.2    
52.3    
52.4    
52.4    
52.5    
52.5    
52.6    
52.7    
52.7    
52.8    
52.9    
52.9    
53.0    
53.1    
53.1    
53.2    
53.2    
53.3    
53.4    
53.4    
53.5    
53.6    
53.6    
53.7    
53.7    
53.8    
53.9    
53.9    
54.0    
54.1    
54.1    
54.2    
54.2    
54.3    
54.4    
54.4    
54.5    
54.6    
54.6    
54.7    
54.8    
54.8    
54.9    
54.9    
55.0    
55.1    
55.1    
55.2    
55.3    
55.3    
55.4    
55.4    
55.5    
55.6    
55.6    
55.7    
55.8    
55.8    
55.9    
55.9    
56.0    
56.1    
56.1    
56.2    
56.3    
56.3    
56.4    
56.5    
56.5    
56.6    
56.6    
56.7    
56.8    
56.8    
56.9    
57.0    
57.0    
57.1    
57.1    
57.2    
57.3    
57.3    
57.4    
57.5    
57.5    
57.6    
57.6    
57.7    
57.8    
57.8    
57.9    
58.0    
58.0    
58.1    
58.1    
58.2    
58.3    
58.3    
58.4    
58.5    
58.5    
58.6    
58.7    
58.7    
58.8    
58.8    
58.9    
59.0    
59.0    
59.1    
59.2    
59.2    
59.3    
59.3    
59.4    
59.5    
59.5    
59.6    
59.7    
59.7    
59.8    
59.8    
59.9    
60.0    
60.0    
60.1    
60.2    
60.2    
60.3    
60.4    
60.4    
60.5    
60.5    
60.6    
60.7    
60.7    
60.8    
60.9    
60.9    
61.0    
61.0    
61.1    
61.2    
61.2    
61.3    
61.4    
61.4    
61.5    
61.5    
61.6    
61.7    
61.7    
61.8    
61.9    
61.9    
62.0    
62.1    
62.1    
62.2    
62.2    
62.3    
62.4    
62.4    
62.5    
62.6    
62.6    
62.7    
62.7    
62.8    
62.9    
62.9    
63.0    
63.1    
63.1    
63.2    
63.2    
63.3    
63.4    
63.4    
63.5    
63.6    
63.6    
63.7    
63.8    
63.8    
63.9    
63.9    
64.0    
64.1    
64.1    
64.2    
64.3    
64.3    
64.4    
64.4    
64.5    
64.6    
64.6    
64.7    
64.8    
64.8    
64.9    
64.9    
65.0    
65.1    
65.1    
65.2    
65.3    
65.3    
65.4    
65.4    
65.5    
65.6    
65.6    
65.7    
65.8    
65.8    
65.9    
66.0    
66.0    
66.1    
66.1    
66.2    
66.3    
66.3    
66.4    
66.5    
66.5    
66.6    
66.6    
66.7    
66.8    
66.8    
66.9    
67.0    
67.0    
67.1    
67.1    
67.2    
67.3    
67.3    
67.4    
67.5    
67.5    
67.6    
67.7    
67.7    
67.8    
67.8    
67.9    
68.0    
68.0    
68.1    
68.2    
68.2    
68.3    
68.3    
68.4    
68.5    
68.5    
68.6    
68.7    
68.7    
68.8    
68.8    
68.9    
69.0    
69.0    
69.1    
69.2    
69.2    
69.3    
69.4    
69.4    
69.5    
69.5    
69.6    
69.7    
69.7    
69.8    
69.9    
69.9    
70.0    
70.0    
70.1    
70.2    
70.2    
70.3    
70.4    
70.4    
70.5    
70.5    
70.6    
70.7    
70.7    
70.8    
70.9    
70.9    
71.0    
71.1    
71.1    
71.2    
71.2    
71.3    
71.4    
71.4    
71.5    
71.6    
71.6    
71.7    
71.7    
71.8    
71.9    
71.9    
72.0    
72.1    
72.1    
72.2    
72.2    
72.3    
72.4    
72.4    
72.5    
72.6    
72.6    
72.7    
72.8    
72.8    
72.9    
72.9    
73.0    
73.1    
73.1    
73.2    
73.3    
73.3    
73.4    
73.4    
73.5    
73.6    
73.6    
73.7    
73.8    
73.8    
73.9    
73.9    
74.0    
74.1    
74.1    
74.2    
74.3    
74.3    
74.4    
74.4    
74.5    
74.6    
74.6    
74.7    
74.8    
74.8    
74.9    
75.0    
75.0    
75.1    
75.1    
75.2    
75.3    
75.3    
75.4    
75.5    
75.5    
75.6    
75.6    
75.7    
75.8    
75.8    
75.9    
76.0    
76.0    
76.1    
76.1    
76.2    
76.3    
76.3    
76.4    
76.5    
76.5    
76.6    
76.7    
76.7    
76.8    
76.8    
76.9    
77.0    
77.0    
77.1    
77.2    
77.2    
77.3    
77.3    
77.4    
77.5    
77.5    
77.6    
77.7    
77.7    
77.8    
77.8    
77.9    
78.0    
78.0    
78.1    
78.2    
78.2    
78.3    
78.4    
78.4    
78.5    
78.5    
78.6    
78.7    
78.7    
78.8    
78.9    
78.9    
79.0    
79.0    
79.1    
79.2    
79.2    
79.3    
79.4    
79.4    
79.5    
79.5    
79.6    
79.7    
79.7    
79.8    
79.9    
79.9    
80.0    
80.1    
80.1    
80.2    
80.2    
80.3    
80.4    
80.4    
80.5    
80.6    
80.6    
80.7    
80.7    
80.8    
80.9    
80.9    
81.0    
81.1    
81.1    
81.2    
81.2    
81.3    
81.4    
81.4    
81.5    
81.6    
81.6    
81.7    
81.7    
81.8    
81.9    
81.9    
82.0    
82.1    
82.1    
82.2    
82.3    
82.3    
82.4    
82.4    
82.5    
82.6    
82.6    
82.7    
82.8    
82.8    
82.9    
82.9    
83.0    
83.1    
83.1    
83.2    
83.3    
83.3    
83.4    
83.4    
83.5    
83.6    
83.6    
83.7    
83.8    
83.8    
83.9    
84.0    
84.0    
84.1    
84.1    
84.2    
84.3    
84.3    
84.4    
84.5    
84.5    
84.6    
84.6    
84.7    
84.8    
84.8    
84.9    
85.0    
85.0    
85.1    
85.1    
85.2    
85.3    
85.3    
85.4    
85.5    
85.5    
85.6    
85.7    
85.7    
85.8    
85.8    
85.9    
86.0    
86.0    
86.1    
86.2    
86.2    
86.3    
86.3    
86.4    
86.5    
86.5    
86.6    
86.7    
86.7    
86.8    
86.8    
86.9    
87.0    
87.0    
87.1    
87.2    
87.2    
87.3    
87.4    
87.4    
87.5    
87.5    
87.6    
87.7    
87.7    
87.8    
87.9    
87.9    
88.0    
88.0    
88.1    
88.2    
88.2    
88.3    
88.4    
88.4    
88.5    
88.5    
88.6    
88.7    
88.7    
88.8    
88.9    
88.9    
89.0    
89.0    
89.1    
89.2    
89.2    
89.3    
89.4    
89.4    
89.5    
89.6    
89.6    
89.7    
89.7    
89.8    
89.9    
89.9    
90.0    
90.1    
90.1    
90.2    
90.2    
90.3    
90.4    
90.4    
90.5    
90.6    
90.6    
90.7    
90.7    
90.8    
90.9    
90.9    
91.0    
91.1    
91.1    
91.2    
91.3    
91.3    
91.4    
91.4    
91.5    
91.6    
91.6    
91.7    
91.8    
91.8    
91.9    
91.9    
92.0    
92.1    
92.1    
92.2    
92.3    
92.3    
92.4    
92.4    
92.5    
92.6    
92.6    
92.7    
92.8    
92.8    
92.9    
93.0    
93.0    
93.1    
93.1    
93.2    
93.3    
93.3    
93.4    
93.5    
93.5    
93.6    
93.6    
93.7    
93.8    
93.8    
93.9    
94.0    
94.0    
94.1    
94.1    
94.2    
94.3    
94.3    
94.4    
94.5    
94.5    
94.6    
94.7    
94.7    
94.8    
94.8    
94.9    
95.0    
95.0    
95.1    
95.2    
95.2    
95.3    
95.3    
95.4    
95.5    
95.5    
95.6    
95.7    
95.7    
95.8    
95.8    
95.9    
96.0    
96.0    
96.1    
96.2    
96.2    
96.3    
96.3    
96.4    
96.5    
96.5    
96.6    
96.7    
96.7    
96.8    
96.9    
96.9    
97.0    
97.0    
97.1    
97.2    
97.2    
97.3    
97.4    
97.4    
97.5    
97.5    
97.6    
97.7    
97.7    
97.8    
97.9    
97.9    
98.0    
98.0    
98.1    
98.2    
98.2    
98.3    
98.4    
98.4    
98.5    
98.6    
98.6    
98.7    
98.7    
98.8    
98.9    
98.9    
99.0    
99.1    
99.1    
99.2    
99.2    
99.3    
99.4    
99.4    
99.5    
99.6    
99.6    
99.7    
99.7    
99.8    
99.9    
99.9    
-found 71 predictions from path traversal
Error with prediction: snap lend_intergenic: 15461, rend_intergenic: 2916  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23190, rend_intergenic: 19027  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 83896, rend_intergenic: 23234  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92912, rend_intergenic: 84146  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122051, rend_intergenic: 92956  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135657, rend_intergenic: 129484  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142235, rend_intergenic: 135782  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169146, rend_intergenic: 144590  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175263, rend_intergenic: 171017  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177890, rend_intergenic: 175966  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 183066, rend_intergenic: 178382  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198706, rend_intergenic: 192389  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206498, rend_intergenic: 200211  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207907, rend_intergenic: 207104  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 212858, rend_intergenic: 208735  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217544, rend_intergenic: 214243  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232141, rend_intergenic: 224715  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 238835, rend_intergenic: 232470  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 243940, rend_intergenic: 239043  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 251581, rend_intergenic: 243946  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 254344, rend_intergenic: 254246  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 257688, rend_intergenic: 256244  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 268787, rend_intergenic: 258250  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 286094, rend_intergenic: 282498  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 306958, rend_intergenic: 293889  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 311576, rend_intergenic: 310132  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 317192, rend_intergenic: 312273  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 323223, rend_intergenic: 319424  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 331476, rend_intergenic: 325612  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 30 predictions persist after filtering for low support