-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_9/scaffold_9_17691756-17932322

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g16277.t1
Valid prediction for snap_scaffold_9-snap.3572-T1
Valid prediction for Augustus_model.g16283.t1
Valid prediction for snap_scaffold_9-snap.3570-T1
Valid prediction for snap_scaffold_9-snap.3574-T1
Valid prediction for GeneMark_model.41627_t
Valid prediction for GlimmerHMM_glimmerT_24288-T1
Valid prediction for snap_scaffold_9-snap.3568-T1
Valid prediction for GlimmerHMM_glimmerT_24282-T1
Valid prediction for GlimmerHMM_glimmerT_24290-T1
Valid prediction for GlimmerHMM_glimmerT_24293-T1
Valid prediction for snap_scaffold_9-snap.3580-T1
Valid prediction for Augustus_model.g16278.t1
Valid prediction for GeneMark_model.41632_t
Valid prediction for GeneMark_model.41619_t
Valid prediction for GeneMark_model.41651_t
Valid prediction for Augustus_model.g16258.t1
Couldn't classify 142498, 142695
Sorry, prediction pasa_asmbl_54627.p1 fails validation.
(AAG)	 GG	142498-142695	GT	AGG
(GTA)	 AG	142901-143095	CC	GAC
-recovered pasa_asmbl_54627.p1, terminal, 142901, 143095
Valid prediction for snap_scaffold_9-snap.3562-T1
Valid prediction for GlimmerHMM_glimmerT_24294-T1
Valid prediction for pasa_asmbl_54620.p2
Valid prediction for snap_scaffold_9-snap.3590-T1
Valid prediction for Augustus_model.g16256.t1
Valid prediction for GeneMark_model.41614_t
Valid prediction for Augustus_model.g16257.t1
Valid prediction for GeneMark_model.41643_t
Valid prediction for GlimmerHMM_glimmerT_24304-T1
Valid prediction for GlimmerHMM_glimmerT_24281-T1
Valid prediction for snap_scaffold_9-snap.3578-T1
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for snap_scaffold_9-snap.3560-T1
Valid prediction for snap_scaffold_9-snap.3599-T1
Valid prediction for GlimmerHMM_glimmerT_24289-T1
Valid prediction for snap_scaffold_9-snap.3573-T1
Valid prediction for GlimmerHMM_glimmerT_24280-T1
Valid prediction for snap_scaffold_9-snap.3586-T1
Valid prediction for GeneMark_model.41645_t
Valid prediction for GeneMark_model.41623_t
Valid prediction for snap_scaffold_9-snap.3589-T1
Valid prediction for GeneMark_model.41648_t
Valid prediction for GlimmerHMM_glimmerT_24284-T1
Valid prediction for CodingQuarry_transcript_62301-T1
Valid prediction for snap_scaffold_9-snap.3588-T1
Valid prediction for GeneMark_model.41647_t
Valid prediction for snap_scaffold_9-snap.3571-T1
Valid prediction for GlimmerHMM_glimmerT_24287-T1
Valid prediction for GlimmerHMM_glimmerT_24286-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.41638_t
Valid prediction for GeneMark_model.41657_t
Valid prediction for GeneMark_model.41634_t
Valid prediction for GeneMark_model.41633_t
Valid prediction for snap_scaffold_9-snap.3604-T1
Valid prediction for snap_scaffold_9-snap.3575-T1
Valid prediction for pasa_asmbl_54623.p1
Valid prediction for snap_scaffold_9-snap.3592-T1
Valid prediction for GlimmerHMM_glimmerT_24307-T1
Valid prediction for HiQ_model.g16263.t1
Valid prediction for GlimmerHMM_glimmerT_24298-T1
Valid prediction for GlimmerHMM_glimmerT_24310-T1
Couldn't classify 141850, 142221
Sorry, prediction pasa_asmbl_54625.p1 fails validation.
(ATG)	 AG	141850-142221	TT	GGT
Valid prediction for Augustus_model.g16259.t1
Valid prediction for GeneMark_model.41617_t
Valid prediction for snap_scaffold_9-snap.3581-T1
Valid prediction for snap_scaffold_9-snap.3597-T1
Valid prediction for GlimmerHMM_glimmerT_24299-T1
Valid prediction for snap_scaffold_9-snap.3594-T1
Valid prediction for GeneMark_model.41628_t
Valid prediction for snap_scaffold_9-snap.3576-T1
Valid prediction for GlimmerHMM_glimmerT_24314-T1
Valid prediction for Augustus_model.g16254.t1
Valid prediction for GeneMark_model.41660_t
Valid prediction for snap_scaffold_9-snap.3587-T1
Couldn't classify 41549, 41608
Sorry, prediction pasa_asmbl_54613.p1 fails validation.
(ATG)	 AG	40925-41023	GT	AGG
(GTG)	 AG	41158-41358	GT	ACG
(GAA)	 AG	41549-41608	CG	ACC
-recovered pasa_asmbl_54613.p1, initial, 40925, 41023
-recovered pasa_asmbl_54613.p1, internal, 40925, 41023
-recovered pasa_asmbl_54613.p1, internal, 41158, 41358
Valid prediction for HiQ_model.g16274.t1
Valid prediction for GeneMark_model.41641_t
Valid prediction for GeneMark_model.41620_t
Valid prediction for GeneMark_model.41640_t
Valid prediction for GlimmerHMM_glimmerT_24292-T1
Valid prediction for Augustus_model.g16262.t1
Couldn't classify 66361, 66591
Couldn't classify 67702, 67734
Sorry, prediction pasa_asmbl_54622.p1 fails validation.
(CTC)	 CA	66361-66591	GT	AGG
(AAC)	 AG	66739-66807	GT	AGG
(GGC)	 AG	66907-67038	GT	AGG
(AGG)	 AG	67702-67734	GC	AGG
-recovered pasa_asmbl_54622.p1, internal, 66739, 66807
-recovered pasa_asmbl_54622.p1, internal, 66907, 67038
-recovered pasa_asmbl_54622.p1, internal, 67702, 67734
Valid prediction for GeneMark_model.41653_t
Valid prediction for GeneMark_model.41659_t
Valid prediction for snap_scaffold_9-snap.3603-T1
Valid prediction for HiQ_model.g16271.t1
Valid prediction for GlimmerHMM_glimmerT_24311-T1
Valid prediction for snap_scaffold_9-snap.3569-T1
Valid prediction for snap_scaffold_9-snap.3561-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_9-snap.3585-T1
Valid prediction for GlimmerHMM_glimmerT_24313-T1
Valid prediction for GlimmerHMM_glimmerT_24297-T1
Valid prediction for snap_scaffold_9-snap.3566-T1
Valid prediction for pasa_asmbl_55646.p1
Valid prediction for GeneMark_model.41630_t
Valid prediction for GeneMark_model.41644_t
Valid prediction for snap_scaffold_9-snap.3563-T1
Valid prediction for Augustus_model.g16279.t1
Valid prediction for GlimmerHMM_glimmerT_24309-T1
Valid prediction for GlimmerHMM_glimmerT_24301-T1
Valid prediction for snap_scaffold_9-snap.3598-T1
Valid prediction for snap_scaffold_9-snap.3583-T1
Couldn't classify 66309, 66494
Couldn't classify 68906, 68932
Sorry, prediction pasa_asmbl_55658.p1 fails validation.
(CAG)	 TC	66309-66494	GT	CAG
(TTC)	 AG	67107-67223	GT	AGG
(CAA)	 AG	68068-68160	GT	AGG
(GAC)	 AG	68268-68444	GT	ATG
(ATC)	 AG	68611-68661	GT	CGG
(AAG)	 AG	68906-68932	TC	GCT
-recovered pasa_asmbl_55658.p1, internal, 67107, 67223
-recovered pasa_asmbl_55658.p1, internal, 68068, 68160
-recovered pasa_asmbl_55658.p1, internal, 68268, 68444
-recovered pasa_asmbl_55658.p1, internal, 68611, 68661
Valid prediction for CodingQuarry_transcript_62302-T1
Valid prediction for HiQ_model.g16266.t1
Valid prediction for GlimmerHMM_glimmerT_24300-T1
Valid prediction for GeneMark_model.41616_t
Valid prediction for Augustus_model.g16269.t1
Valid prediction for Augustus_model.g16280.t1
Valid prediction for Augustus_model.g16265.t1
Valid prediction for GeneMark_model.41658_t
Valid prediction for GeneMark_model.41637_t
Valid prediction for CodingQuarry_transcript_62306-T1
Valid prediction for GlimmerHMM_glimmerT_24308-T1
Valid prediction for GeneMark_model.41649_t
Valid prediction for snap_scaffold_9-snap.3584-T1
Valid prediction for GlimmerHMM_glimmerT_24315-T1
Couldn't classify 112647, 112759
Couldn't classify 125859, 125930
Sorry, prediction pasa_asmbl_55650.p1 fails validation.
(ATC)	 AC	112647-112759	GT	AAG
(GTC)	 AG	115739-115793	GT	AGG
(TTG)	 AG	116035-116163	GT	AGG
(ACA)	 AG	118869-118991	GT	GGG
(GTG)	 AG	119212-119307	GT	CGG
(AGT)	 AG	121414-121530	GT	GAG
(ACG)	 AG	121612-121716	GT	AGG
(ATT)	 AG	123632-123721	GT	AGG
(GTG)	 AG	123809-123871	GT	CGG
(GGC)	 AG	125181-125315	GT	AGG
(GCG)	 AG	125859-125930	GA	AGG
-recovered pasa_asmbl_55650.p1, internal, 115739, 115793
-recovered pasa_asmbl_55650.p1, internal, 116035, 116163
-recovered pasa_asmbl_55650.p1, internal, 118869, 118991
-recovered pasa_asmbl_55650.p1, internal, 119212, 119307
-recovered pasa_asmbl_55650.p1, internal, 121414, 121530
-recovered pasa_asmbl_55650.p1, internal, 121612, 121716
-recovered pasa_asmbl_55650.p1, internal, 123632, 123721
-recovered pasa_asmbl_55650.p1, internal, 123809, 123871
-recovered pasa_asmbl_55650.p1, internal, 125181, 125315
Valid prediction for HiQ_model.g16272.t1
Valid prediction for GlimmerHMM_glimmerT_24302-T1
Valid prediction for snap_scaffold_9-snap.3610-T1
Valid prediction for snap_scaffold_9-snap.3596-T1
Valid prediction for GlimmerHMM_glimmerT_24295-T1
Valid prediction for CodingQuarry_transcript_62298-T1
Valid prediction for GlimmerHMM_glimmerT_24285-T1
Valid prediction for snap_scaffold_9-snap.3602-T1
Valid prediction for GeneMark_model.41654_t
Valid prediction for Augustus_model.g16253.t1
Valid prediction for GeneMark_model.41636_t
Valid prediction for GeneMark_model.41650_t
Valid prediction for snap_scaffold_9-snap.3582-T1
Valid prediction for GeneMark_model.41635_t
Valid prediction for GlimmerHMM_glimmerT_24312-T1
Couldn't classify 150220, 150354
Sorry, prediction pasa_asmbl_55639.p1 fails validation.
(TTT)	 AC	150220-150354	GT	AGG
(GTT)	 AG	150447-150590	GT	AGG
(GTG)	 AG	150719-150839	GT	GGG
(AGC)	 AG	151047-151237	GC	AGG
-recovered pasa_asmbl_55639.p1, terminal, 151047, 151237
-recovered pasa_asmbl_55639.p1, internal, 150447, 150590
-recovered pasa_asmbl_55639.p1, internal, 150719, 150839
-recovered pasa_asmbl_55639.p1, internal, 151047, 151237
Valid prediction for CodingQuarry_transcript_62303-T1
Valid prediction for Augustus_model.g16276.t1
Couldn't classify 146521, 146526
Couldn't classify 147809, 147825
Sorry, prediction pasa_asmbl_55642.p1 fails validation.
(GAA)	 AT	146521-146526	GT	ATG
(GCC)	 AG	146623-146711	GT	AGG
(CAT)	 AG	146804-146924	GT	TGG
(GGG)	 AG	147104-147175	GT	GGG
(AGG)	 AG	147455-147629	GT	TGG
(AGG)	 AG	147809-147825	GT	CAG
-recovered pasa_asmbl_55642.p1, internal, 146623, 146711
-recovered pasa_asmbl_55642.p1, internal, 146804, 146924
-recovered pasa_asmbl_55642.p1, internal, 147104, 147175
-recovered pasa_asmbl_55642.p1, internal, 147455, 147629
-recovered pasa_asmbl_55642.p1, internal, 147809, 147825
Valid prediction for snap_scaffold_9-snap.3593-T1
Valid prediction for GlimmerHMM_glimmerT_24296-T1
Valid prediction for GeneMark_model.41622_t
Valid prediction for Augustus_model.g16264.t1
Valid prediction for GeneMark_model.41626_t
Valid prediction for GeneMark_model.41661_t
Valid prediction for snap_scaffold_9-snap.3609-T1
Valid prediction for GlimmerHMM_glimmerT_24306-T1
Valid prediction for snap_scaffold_9-snap.3605-T1
Valid prediction for snap_scaffold_9-snap.3601-T1
Valid prediction for CodingQuarry_transcript_62304-T1
Valid prediction for HiQ_model.g16251.t1
Valid prediction for GeneMark_model.41613_t
Valid prediction for pasa_asmbl_55660.p1
Valid prediction for GeneMark_model.41652_t
Valid prediction for Augustus_model.g16273.t1
Valid prediction for Augustus_model.g16282.t1
Valid prediction for GeneMark_model.41646_t
Valid prediction for GeneMark_model.41631_t
Valid prediction for snap_scaffold_9-snap.3577-T1
Valid prediction for GlimmerHMM_glimmerT_24305-T1
Valid prediction for GeneMark_model.41639_t
Valid prediction for GlimmerHMM_glimmerT_24283-T1
Valid prediction for Augustus_model.g16268.t1
Couldn't classify 69357, 69363
Couldn't classify 71555, 71664
Sorry, prediction pasa_asmbl_55657.p1 fails validation.
(GTG)	 TG	69357-69363	GT	AAG
(ACT)	 AG	69443-69561	GT	AGG
(TCG)	 AG	69775-69982	GT	GGG
(CAA)	 AG	70116-70189	GT	AGG
(TTC)	 AG	70373-70456	GT	AGG
(GTG)	 AG	70656-70759	GT	AGG
(GGA)	 AG	71008-71129	GT	AGG
(GGG)	 AG	71253-71372	GT	GAG
(ACG)	 AG	71555-71664	GG	GAG
-recovered pasa_asmbl_55657.p1, internal, 69443, 69561
-recovered pasa_asmbl_55657.p1, internal, 69775, 69982
-recovered pasa_asmbl_55657.p1, internal, 70116, 70189
-recovered pasa_asmbl_55657.p1, internal, 70373, 70456
-recovered pasa_asmbl_55657.p1, internal, 70656, 70759
-recovered pasa_asmbl_55657.p1, internal, 71008, 71129
-recovered pasa_asmbl_55657.p1, internal, 71253, 71372
Valid prediction for HiQ_model.g16252.t1
Valid prediction for pasa_asmbl_55637.p1
Valid prediction for Augustus_model.g16281.t1
Valid prediction for GeneMark_model.41625_t
Valid prediction for GlimmerHMM_glimmerT_24303-T1
Valid prediction for snap_scaffold_9-snap.3608-T1
Valid prediction for GlimmerHMM_glimmerT_24291-T1
Valid prediction for CodingQuarry_transcript_62300-T1
Valid prediction for HiQ_model.g16255.t1
Valid prediction for pasa_asmbl_55634.p1
Valid prediction for Augustus_model.g16275.t1
Valid prediction for snap_scaffold_9-snap.3607-T1
Valid prediction for snap_scaffold_9-snap.3600-T1
Valid prediction for GeneMark_model.41656_t
Valid prediction for CodingQuarry_transcript_62299-T1
Valid prediction for Augustus_model.g16260.t1
Valid prediction for snap_scaffold_9-snap.3595-T1
Couldn't classify 40508, 40843
Sorry, prediction pasa_asmbl_55659.p1 fails validation.
(CAT)	 AA	40508-40843	GC	GGG
Valid prediction for snap_scaffold_9-snap.3606-T1
Valid prediction for GeneMark_model.41629_t
Valid prediction for snap_scaffold_9-snap.3564-T1
Valid prediction for Augustus_model.g16261.t1
Valid prediction for snap_scaffold_9-snap.3579-T1
Valid prediction for snap_scaffold_9-snap.3567-T1
Valid prediction for snap_scaffold_9-snap.3565-T1
Valid prediction for pasa_asmbl_55654.p1
Couldn't classify 147973, 148014
Couldn't classify 149756, 149779
Sorry, prediction pasa_asmbl_55640.p1 fails validation.
(CTG)	 CC	147973-148014	GT	AGG
(GAC)	 AG	148285-148427	GT	AAG
(GTG)	 AG	148539-148654	GT	CTG
(ACA)	 AG	148757-148890	GT	GGG
(CTG)	 AG	149003-149169	GT	AGG
(AGA)	 AG	149358-149451	GT	AGG
(GCC)	 AG	149559-149639	GT	AAG
(ATC)	 AG	149756-149779	GA	TGG
-recovered pasa_asmbl_55640.p1, internal, 148285, 148427
-recovered pasa_asmbl_55640.p1, internal, 148539, 148654
-recovered pasa_asmbl_55640.p1, internal, 148757, 148890
-recovered pasa_asmbl_55640.p1, internal, 149003, 149169
-recovered pasa_asmbl_55640.p1, internal, 149358, 149451
-recovered pasa_asmbl_55640.p1, internal, 149559, 149639
Valid prediction for pasa_asmbl_55636.p1
Valid prediction for GeneMark_model.41615_t
Valid prediction for Augustus_model.g16267.t1
Valid prediction for Augustus_model.g16270.t1
Valid prediction for GeneMark_model.41618_t
Valid prediction for GeneMark_model.41642_t
Valid prediction for GeneMark_model.41655_t
Valid prediction for snap_scaffold_9-snap.3591-T1
Valid prediction for CodingQuarry_transcript_62305-T1
Valid prediction for GeneMark_model.41624_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 125649, rend_intergenic: 106912  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132464, rend_intergenic: 127805  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155354, rend_intergenic: 152340  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157644, rend_intergenic: 155508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174390, rend_intergenic: 168508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184986, rend_intergenic: 179182  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198938, rend_intergenic: 187423  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200023, rend_intergenic: 199521  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 35337, rend_intergenic: 35334  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 240567
-exon list size: 772


building trellis

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35.7    
35.8    
35.9    
36.0    
36.2    
36.3    
36.4    
36.6    
36.7    
36.8    
37.0    
37.1    
37.2    
37.3    
37.5    
37.6    
37.7    
37.9    
38.0    
38.1    
38.2    
38.4    
38.5    
38.6    
38.8    
38.9    
39.0    
39.1    
39.3    
39.4    
39.5    
39.7    
39.8    
39.9    
40.1    
40.2    
40.3    
40.4    
40.6    
40.7    
40.8    
41.0    
41.1    
41.2    
41.3    
41.5    
41.6    
41.7    
41.9    
42.0    
42.1    
42.2    
42.4    
42.5    
42.6    
42.8    
42.9    
43.0    
43.2    
43.3    
43.4    
43.5    
43.7    
43.8    
43.9    
44.1    
44.2    
44.3    
44.4    
44.6    
44.7    
44.8    
45.0    
45.1    
45.2    
45.3    
45.5    
45.6    
45.7    
45.9    
46.0    
46.1    
46.3    
46.4    
46.5    
46.6    
46.8    
46.9    
47.0    
47.2    
47.3    
47.4    
47.5    
47.7    
47.8    
47.9    
48.1    
48.2    
48.3    
48.4    
48.6    
48.7    
48.8    
49.0    
49.1    
49.2    
49.4    
49.5    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.5    
50.6    
50.8    
50.9    
51.0    
51.2    
51.3    
51.4    
51.6    
51.7    
51.8    
51.9    
52.1    
52.2    
52.3    
52.5    
52.6    
52.7    
52.8    
53.0    
53.1    
53.2    
53.4    
53.5    
53.6    
53.7    
53.9    
54.0    
54.1    
54.3    
54.4    
54.5    
54.7    
54.8    
54.9    
55.0    
55.2    
55.3    
55.4    
55.6    
55.7    
55.8    
55.9    
56.1    
56.2    
56.3    
56.5    
56.6    
56.7    
56.8    
57.0    
57.1    
57.2    
57.4    
57.5    
57.6    
57.8    
57.9    
58.0    
58.1    
58.3    
58.4    
58.5    
58.7    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.6    
59.7    
59.8    
59.9    
60.1    
60.2    
60.3    
60.5    
60.6    
60.7    
60.9    
61.0    
61.1    
61.2    
61.4    
61.5    
61.6    
61.8    
61.9    
62.0    
62.1    
62.3    
62.4    
62.5    
62.7    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.6    
63.7    
63.8    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.9    
65.0    
65.1    
65.2    
65.4    
65.5    
65.6    
65.8    
65.9    
66.0    
66.1    
66.3    
66.4    
66.5    
66.7    
66.8    
66.9    
67.1    
67.2    
67.3    
67.4    
67.6    
67.7    
67.8    
68.0    
68.1    
68.2    
68.3    
68.5    
68.6    
68.7    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.8    
69.9    
70.0    
70.2    
70.3    
70.4    
70.5    
70.7    
70.8    
70.9    
71.1    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
72.0    
72.1    
72.2    
72.4    
72.5    
72.6    
72.7    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.6    
73.8    
73.9    
74.0    
74.2    
74.3    
74.4    
74.5    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.8    
76.0    
76.1    
76.2    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.3    
77.4    
77.5    
77.6    
77.8    
77.9    
78.0    
78.2    
78.3    
78.4    
78.6    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.5    
79.6    
79.7    
79.8    
80.0    
80.1    
80.2    
80.4    
80.5    
80.6    
80.7    
80.9    
81.0    
81.1    
81.3    
81.4    
81.5    
81.7    
81.8    
81.9    
82.0    
82.2    
82.3    
82.4    
82.6    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.5    
83.6    
83.7    
83.9    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.8    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.7    
85.8    
85.9    
86.0    
86.2    
86.3    
86.4    
86.6    
86.7    
86.8    
87.0    
87.1    
87.2    
87.3    
87.5    
87.6    
87.7    
87.9    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.8    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.7    
89.8    
89.9    
90.1    
90.2    
90.3    
90.4    
90.6    
90.7    
90.8    
91.0    
91.1    
91.2    
91.3    
91.5    
91.6    
91.7    
91.9    
92.0    
92.1    
92.2    
92.4    
92.5    
92.6    
92.8    
92.9    
93.0    
93.2    
93.3    
93.4    
93.5    
93.7    
93.8    
93.9    
94.1    
94.2    
94.3    
94.4    
94.6    
94.7    
94.8    
95.0    
95.1    
95.2    
95.3    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.3    
96.4    
96.5    
96.6    
96.8    
96.9    
97.0    
97.2    
97.3    
97.4    
97.5    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.9    
-found 45 predictions from path traversal
Error with prediction: snap lend_intergenic: 125649, rend_intergenic: 106912  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132464, rend_intergenic: 127805  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155354, rend_intergenic: 152340  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157644, rend_intergenic: 155508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174390, rend_intergenic: 168508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184986, rend_intergenic: 179182  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198938, rend_intergenic: 187423  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200023, rend_intergenic: 199521  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 35337, rend_intergenic: 35334  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 38 predictions persist after filtering for low support