-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_9/scaffold_9_14277154-14486474

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_23839-T1
Valid prediction for snap_scaffold_9-snap.2936-T1
Valid prediction for snap_scaffold_9-snap.2920-T1
Valid prediction for GeneMark_model.40843_t
Valid prediction for GeneMark_model.40835_t
Valid prediction for snap_scaffold_9-snap.2893-T1
Valid prediction for snap_scaffold_9-snap.2919-T1
Valid prediction for GlimmerHMM_glimmerT_23830-T1
Valid prediction for GeneMark_model.40837_t
Valid prediction for GlimmerHMM_glimmerT_23841-T1
Valid prediction for Augustus_model.g15972.t1
Valid prediction for GlimmerHMM_glimmerT_23827-T1
Valid prediction for GlimmerHMM_glimmerT_23811-T1
Valid prediction for GlimmerHMM_glimmerT_23843-T1
Valid prediction for GeneMark_model.40902_t
Valid prediction for Augustus_model.g15975.t1
Valid prediction for GeneMark_model.40888_t
Valid prediction for GeneMark_model.40839_t
Valid prediction for snap_scaffold_9-snap.2901-T1
Valid prediction for Augustus_model.g15971.t1
Valid prediction for snap_scaffold_9-snap.2917-T1
Valid prediction for snap_scaffold_9-snap.2913-T1
Valid prediction for GeneMark_model.40900_t
Valid prediction for snap_scaffold_9-snap.2922-T1
Valid prediction for Augustus_model.g15970.t1
Valid prediction for snap_scaffold_9-snap.2912-T1
Valid prediction for GeneMark_model.40841_t
Valid prediction for snap_scaffold_9-snap.2886-T1
Valid prediction for GeneMark_model.40831_t
Valid prediction for pasa_asmbl_54510.p1
Valid prediction for GeneMark_model.40892_t
Valid prediction for HiQ_model.g15954.t1
Valid prediction for snap_scaffold_9-snap.2903-T1
Valid prediction for snap_scaffold_9-snap.2897-T1
Valid prediction for GeneMark_model.40866_t
Valid prediction for GeneMark_model.40890_t
Valid prediction for GlimmerHMM_glimmerT_23825-T1
Valid prediction for Augustus_model.g15966.t1
Valid prediction for Augustus_model.g15960.t1
Valid prediction for GeneMark_model.40882_t
Valid prediction for GeneMark_model.40896_t
Valid prediction for GeneMark_model.40865_t
Valid prediction for Augustus_model.g15968.t1
Valid prediction for GlimmerHMM_glimmerT_23838-T1
Valid prediction for GeneMark_model.40879_t
Valid prediction for GlimmerHMM_glimmerT_23844-T1
Valid prediction for GeneMark_model.40894_t
Valid prediction for GlimmerHMM_glimmerT_23824-T1
Valid prediction for snap_scaffold_9-snap.2931-T1
Valid prediction for GlimmerHMM_glimmerT_23836-T1
Valid prediction for GeneMark_model.40850_t
Valid prediction for GeneMark_model.40854_t
Valid prediction for snap_scaffold_9-snap.2911-T1
Valid prediction for snap_scaffold_9-snap.2906-T1
Valid prediction for CodingQuarry_transcript_62235-T1
Valid prediction for snap_scaffold_9-snap.2888-T1
Valid prediction for snap_scaffold_9-snap.2934-T1
Valid prediction for GeneMark_model.40874_t
Valid prediction for GeneMark_model.40873_t
Valid prediction for GeneMark_model.40833_t
Valid prediction for GlimmerHMM_glimmerT_23834-T1
Valid prediction for snap_scaffold_9-snap.2927-T1
Valid prediction for GlimmerHMM_glimmerT_23817-T1
Valid prediction for GeneMark_model.40877_t
Valid prediction for Augustus_model.g15969.t1
Valid prediction for snap_scaffold_9-snap.2925-T1
Valid prediction for Augustus_model.g15962.t1
Valid prediction for GeneMark_model.40868_t
Valid prediction for GlimmerHMM_glimmerT_23819-T1
Valid prediction for GlimmerHMM_glimmerT_23831-T1
Valid prediction for GlimmerHMM_glimmerT_23826-T1
Valid prediction for GeneMark_model.40870_t
Valid prediction for Augustus_model.g15974.t1
Valid prediction for GeneMark_model.40857_t
Valid prediction for snap_scaffold_9-snap.2929-T1
Valid prediction for snap_scaffold_9-snap.2915-T1
Valid prediction for snap_scaffold_9-snap.2924-T1
Valid prediction for GeneMark_model.40861_t
Valid prediction for snap_scaffold_9-snap.2895-T1
Valid prediction for GeneMark_model.40886_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_9-snap.2908-T1
Valid prediction for CodingQuarry_transcript_62237-T1
Valid prediction for GeneMark_model.40859_t
Valid prediction for snap_scaffold_9-snap.2918-T1
Valid prediction for snap_scaffold_9-snap.2921-T1
Valid prediction for GlimmerHMM_glimmerT_23823-T1
Valid prediction for snap_scaffold_9-snap.2887-T1
Valid prediction for GeneMark_model.40883_t
Valid prediction for GlimmerHMM_glimmerT_23812-T1
Valid prediction for GeneMark_model.40903_t
Valid prediction for GeneMark_model.40853_t
Valid prediction for GlimmerHMM_glimmerT_23822-T1
Valid prediction for GlimmerHMM_glimmerT_23837-T1
Valid prediction for GeneMark_model.40836_t
Valid prediction for GlimmerHMM_glimmerT_23833-T1
Valid prediction for GeneMark_model.40871_t
Valid prediction for snap_scaffold_9-snap.2928-T1
Valid prediction for Augustus_model.g15963.t1
Valid prediction for snap_scaffold_9-snap.2896-T1
Valid prediction for GlimmerHMM_glimmerT_23845-T1
Valid prediction for snap_scaffold_9-snap.2900-T1
Valid prediction for GeneMark_model.40832_t
Valid prediction for GeneMark_model.40851_t
Valid prediction for GlimmerHMM_glimmerT_23820-T1
Valid prediction for GeneMark_model.40845_t
Valid prediction for GeneMark_model.40885_t
Valid prediction for GeneMark_model.40898_t
Valid prediction for Augustus_model.g15956.t1
Valid prediction for GlimmerHMM_glimmerT_23840-T1
Valid prediction for snap_scaffold_9-snap.2898-T1
Valid prediction for GeneMark_model.40876_t
Valid prediction for GeneMark_model.40842_t
Valid prediction for snap_scaffold_9-snap.2932-T1
Valid prediction for GeneMark_model.40897_t
Valid prediction for GeneMark_model.40838_t
Valid prediction for GeneMark_model.40864_t
Valid prediction for GeneMark_model.40895_t
Valid prediction for Augustus_model.g15967.t1
Valid prediction for snap_scaffold_9-snap.2937-T1
Valid prediction for GeneMark_model.40847_t
Valid prediction for Augustus_model.g15961.t1
Valid prediction for GeneMark_model.40869_t
Valid prediction for snap_scaffold_9-snap.2907-T1
Valid prediction for snap_scaffold_9-snap.2926-T1
Valid prediction for GeneMark_model.40862_t
Valid prediction for GlimmerHMM_glimmerT_23828-T1
Valid prediction for GeneMark_model.40849_t
Valid prediction for GeneMark_model.40858_t
Valid prediction for snap_scaffold_9-snap.2894-T1
Valid prediction for GeneMark_model.40884_t
Valid prediction for snap_scaffold_9-snap.2938-T1
Valid prediction for GeneMark_model.40878_t
Valid prediction for Augustus_model.g15959.t1
Valid prediction for snap_scaffold_9-snap.2909-T1
Valid prediction for pasa_asmbl_55441.p1
Valid prediction for GeneMark_model.40901_t
Valid prediction for GeneMark_model.40875_t
Valid prediction for snap_scaffold_9-snap.2910-T1
Valid prediction for snap_scaffold_9-snap.2891-T1
Valid prediction for snap_scaffold_9-snap.2890-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for snap_scaffold_9-snap.2904-T1
Valid prediction for GlimmerHMM_glimmerT_23809-T1
Valid prediction for GeneMark_model.40856_t
Valid prediction for snap_scaffold_9-snap.2899-T1
Valid prediction for GlimmerHMM_glimmerT_23842-T1
Valid prediction for GlimmerHMM_glimmerT_23810-T1
Valid prediction for GlimmerHMM_glimmerT_23814-T1
Valid prediction for GeneMark_model.40855_t
Valid prediction for GlimmerHMM_glimmerT_23832-T1
Valid prediction for GeneMark_model.40867_t
Valid prediction for GlimmerHMM_glimmerT_23821-T1
Valid prediction for GeneMark_model.40880_t
Valid prediction for Augustus_model.g15965.t1
Valid prediction for snap_scaffold_9-snap.2923-T1
Valid prediction for GeneMark_model.40899_t
Valid prediction for GeneMark_model.40891_t
Valid prediction for snap_scaffold_9-snap.2935-T1
Valid prediction for GeneMark_model.40860_t
Valid prediction for GeneMark_model.40840_t
Valid prediction for snap_scaffold_9-snap.2914-T1
Valid prediction for GeneMark_model.40834_t
Valid prediction for GlimmerHMM_glimmerT_23835-T1
Valid prediction for snap_scaffold_9-snap.2916-T1
Valid prediction for GeneMark_model.40881_t
Valid prediction for snap_scaffold_9-snap.2933-T1
Valid prediction for GlimmerHMM_glimmerT_23816-T1
Valid prediction for GlimmerHMM_glimmerT_23818-T1
Valid prediction for snap_scaffold_9-snap.2930-T1
Valid prediction for GlimmerHMM_glimmerT_23813-T1
Valid prediction for GlimmerHMM_glimmerT_23829-T1
Valid prediction for Augustus_model.g15955.t1
Valid prediction for Augustus_model.g15958.t1
Valid prediction for GeneMark_model.40893_t
Valid prediction for GlimmerHMM_glimmerT_23815-T1
Valid prediction for snap_scaffold_9-snap.2892-T1
Valid prediction for Augustus_model.g15957.t1
Valid prediction for GeneMark_model.40887_t
Valid prediction for GeneMark_model.40852_t
Valid prediction for GeneMark_model.40844_t
Valid prediction for snap_scaffold_9-snap.2889-T1
Valid prediction for GeneMark_model.40889_t
Valid prediction for snap_scaffold_9-snap.2905-T1
Valid prediction for Augustus_model.g15964.t1
Valid prediction for Augustus_model.g15973.t1
Valid prediction for snap_scaffold_9-snap.2902-T1
Valid prediction for GeneMark_model.40872_t
Valid prediction for CodingQuarry_transcript_62236-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7271, rend_intergenic: 4395  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20821, rend_intergenic: 7918  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33128, rend_intergenic: 27804  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35566, rend_intergenic: 33725  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39913, rend_intergenic: 36238  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56055, rend_intergenic: 52902  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65683, rend_intergenic: 63644  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71944, rend_intergenic: 65885  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80213, rend_intergenic: 77019  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81621, rend_intergenic: 80662  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111039, rend_intergenic: 96672  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139541, rend_intergenic: 134087  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 152318, rend_intergenic: 146339  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154112, rend_intergenic: 153341  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160195, rend_intergenic: 154144  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170601, rend_intergenic: 164667  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172908, rend_intergenic: 172159  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176289, rend_intergenic: 173526  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177914, rend_intergenic: 177118  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182906, rend_intergenic: 181748  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184918, rend_intergenic: 183533  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188464, rend_intergenic: 185924  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189498, rend_intergenic: 188816  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191599, rend_intergenic: 189783  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205712, rend_intergenic: 197344  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 209321
-exon list size: 829


building trellis

0.1    
0.2    
0.4    
0.5    
0.6    
0.7    
0.8    
1.0    
1.1    
1.2    
1.3    
1.4    
1.6    
1.7    
1.8    
1.9    
2.0    
2.2    
2.3    
2.4    
2.5    
2.6    
2.8    
2.9    
3.0    
3.1    
3.2    
3.4    
3.5    
3.6    
3.7    
3.9    
4.0    
4.1    
4.2    
4.3    
4.5    
4.6    
4.7    
4.8    
4.9    
5.1    
5.2    
5.3    
5.4    
5.5    
5.7    
5.8    
5.9    
6.0    
6.1    
6.3    
6.4    
6.5    
6.6    
6.7    
6.9    
7.0    
7.1    
7.2    
7.3    
7.5    
7.6    
7.7    
7.8    
7.9    
8.1    
8.2    
8.3    
8.4    
8.5    
8.7    
8.8    
8.9    
9.0    
9.1    
9.3    
9.4    
9.5    
9.6    
9.7    
9.9    
10.0    
10.1    
10.2    
10.3    
10.5    
10.6    
10.7    
10.8    
11.0    
11.1    
11.2    
11.3    
11.4    
11.6    
11.7    
11.8    
11.9    
12.0    
12.2    
12.3    
12.4    
12.5    
12.6    
12.8    
12.9    
13.0    
13.1    
13.2    
13.4    
13.5    
13.6    
13.7    
13.8    
14.0    
14.1    
14.2    
14.3    
14.4    
14.6    
14.7    
14.8    
14.9    
15.0    
15.2    
15.3    
15.4    
15.5    
15.6    
15.8    
15.9    
16.0    
16.1    
16.2    
16.4    
16.5    
16.6    
16.7    
16.8    
17.0    
17.1    
17.2    
17.3    
17.4    
17.6    
17.7    
17.8    
17.9    
18.1    
18.2    
18.3    
18.4    
18.5    
18.7    
18.8    
18.9    
19.0    
19.1    
19.3    
19.4    
19.5    
19.6    
19.7    
19.9    
20.0    
20.1    
20.2    
20.3    
20.5    
20.6    
20.7    
20.8    
20.9    
21.1    
21.2    
21.3    
21.4    
21.5    
21.7    
21.8    
21.9    
22.0    
22.1    
22.3    
22.4    
22.5    
22.6    
22.7    
22.9    
23.0    
23.1    
23.2    
23.3    
23.5    
23.6    
23.7    
23.8    
23.9    
24.1    
24.2    
24.3    
24.4    
24.5    
24.7    
24.8    
24.9    
25.0    
25.2    
25.3    
25.4    
25.5    
25.6    
25.8    
25.9    
26.0    
26.1    
26.2    
26.4    
26.5    
26.6    
26.7    
26.8    
27.0    
27.1    
27.2    
27.3    
27.4    
27.6    
27.7    
27.8    
27.9    
28.0    
28.2    
28.3    
28.4    
28.5    
28.6    
28.8    
28.9    
29.0    
29.1    
29.2    
29.4    
29.5    
29.6    
29.7    
29.8    
30.0    
30.1    
30.2    
30.3    
30.4    
30.6    
30.7    
30.8    
30.9    
31.0    
31.2    
31.3    
31.4    
31.5    
31.6    
31.8    
31.9    
32.0    
32.1    
32.3    
32.4    
32.5    
32.6    
32.7    
32.9    
33.0    
33.1    
33.2    
33.3    
33.5    
33.6    
33.7    
33.8    
33.9    
34.1    
34.2    
34.3    
34.4    
34.5    
34.7    
34.8    
34.9    
35.0    
35.1    
35.3    
35.4    
35.5    
35.6    
35.7    
35.9    
36.0    
36.1    
36.2    
36.3    
36.5    
36.6    
36.7    
36.8    
36.9    
37.1    
37.2    
37.3    
37.4    
37.5    
37.7    
37.8    
37.9    
38.0    
38.1    
38.3    
38.4    
38.5    
38.6    
38.7    
38.9    
39.0    
39.1    
39.2    
39.4    
39.5    
39.6    
39.7    
39.8    
40.0    
40.1    
40.2    
40.3    
40.4    
40.6    
40.7    
40.8    
40.9    
41.0    
41.2    
41.3    
41.4    
41.5    
41.6    
41.8    
41.9    
42.0    
42.1    
42.2    
42.4    
42.5    
42.6    
42.7    
42.8    
43.0    
43.1    
43.2    
43.3    
43.4    
43.6    
43.7    
43.8    
43.9    
44.0    
44.2    
44.3    
44.4    
44.5    
44.6    
44.8    
44.9    
45.0    
45.1    
45.2    
45.4    
45.5    
45.6    
45.7    
45.8    
46.0    
46.1    
46.2    
46.3    
46.5    
46.6    
46.7    
46.8    
46.9    
47.1    
47.2    
47.3    
47.4    
47.5    
47.7    
47.8    
47.9    
48.0    
48.1    
48.3    
48.4    
48.5    
48.6    
48.7    
48.9    
49.0    
49.1    
49.2    
49.3    
49.5    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.7    
50.8    
50.9    
51.0    
51.1    
51.3    
51.4    
51.5    
51.6    
51.7    
51.9    
52.0    
52.1    
52.2    
52.3    
52.5    
52.6    
52.7    
52.8    
52.9    
53.1    
53.2    
53.3    
53.4    
53.5    
53.7    
53.8    
53.9    
54.0    
54.2    
54.3    
54.4    
54.5    
54.6    
54.8    
54.9    
55.0    
55.1    
55.2    
55.4    
55.5    
55.6    
55.7    
55.8    
56.0    
56.1    
56.2    
56.3    
56.4    
56.6    
56.7    
56.8    
56.9    
57.0    
57.2    
57.3    
57.4    
57.5    
57.6    
57.8    
57.9    
58.0    
58.1    
58.2    
58.4    
58.5    
58.6    
58.7    
58.8    
59.0    
59.1    
59.2    
59.3    
59.4    
59.6    
59.7    
59.8    
59.9    
60.0    
60.2    
60.3    
60.4    
60.5    
60.6    
60.8    
60.9    
61.0    
61.1    
61.3    
61.4    
61.5    
61.6    
61.7    
61.9    
62.0    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.8    
62.9    
63.1    
63.2    
63.3    
63.4    
63.5    
63.7    
63.8    
63.9    
64.0    
64.1    
64.3    
64.4    
64.5    
64.6    
64.7    
64.9    
65.0    
65.1    
65.2    
65.3    
65.5    
65.6    
65.7    
65.8    
65.9    
66.1    
66.2    
66.3    
66.4    
66.5    
66.7    
66.8    
66.9    
67.0    
67.1    
67.3    
67.4    
67.5    
67.6    
67.7    
67.9    
68.0    
68.1    
68.2    
68.4    
68.5    
68.6    
68.7    
68.8    
69.0    
69.1    
69.2    
69.3    
69.4    
69.6    
69.7    
69.8    
69.9    
70.0    
70.2    
70.3    
70.4    
70.5    
70.6    
70.8    
70.9    
71.0    
71.1    
71.2    
71.4    
71.5    
71.6    
71.7    
71.8    
72.0    
72.1    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
72.9    
73.0    
73.2    
73.3    
73.4    
73.5    
73.6    
73.8    
73.9    
74.0    
74.1    
74.2    
74.4    
74.5    
74.6    
74.7    
74.8    
75.0    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.4    
76.5    
76.7    
76.8    
76.9    
77.0    
77.1    
77.3    
77.4    
77.5    
77.6    
77.7    
77.9    
78.0    
78.1    
78.2    
78.3    
78.5    
78.6    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.4    
79.5    
79.7    
79.8    
79.9    
80.0    
80.1    
80.3    
80.4    
80.5    
80.6    
80.7    
80.9    
81.0    
81.1    
81.2    
81.3    
81.5    
81.6    
81.7    
81.8    
81.9    
82.1    
82.2    
82.3    
82.4    
82.6    
82.7    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.5    
83.6    
83.8    
83.9    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.7    
84.8    
85.0    
85.1    
85.2    
85.3    
85.4    
85.6    
85.7    
85.8    
85.9    
86.0    
86.2    
86.3    
86.4    
86.5    
86.6    
86.8    
86.9    
87.0    
87.1    
87.2    
87.4    
87.5    
87.6    
87.7    
87.8    
88.0    
88.1    
88.2    
88.3    
88.4    
88.6    
88.7    
88.8    
88.9    
89.0    
89.2    
89.3    
89.4    
89.5    
89.7    
89.8    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.6    
90.7    
90.9    
91.0    
91.1    
91.2    
91.3    
91.5    
91.6    
91.7    
91.8    
91.9    
92.1    
92.2    
92.3    
92.4    
92.5    
92.7    
92.8    
92.9    
93.0    
93.1    
93.3    
93.4    
93.5    
93.6    
93.7    
93.9    
94.0    
94.1    
94.2    
94.3    
94.5    
94.6    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.4    
95.5    
95.7    
95.8    
95.9    
96.0    
96.1    
96.3    
96.4    
96.5    
96.6    
96.8    
96.9    
97.0    
97.1    
97.2    
97.4    
97.5    
97.6    
97.7    
97.8    
98.0    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
98.9    
99.0    
99.2    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 61 predictions from path traversal
Error with prediction: snap lend_intergenic: 7271, rend_intergenic: 4395  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20821, rend_intergenic: 7918  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33128, rend_intergenic: 27804  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35566, rend_intergenic: 33725  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39913, rend_intergenic: 36238  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56055, rend_intergenic: 52902  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65683, rend_intergenic: 63644  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71944, rend_intergenic: 65885  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80213, rend_intergenic: 77019  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81621, rend_intergenic: 80662  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111039, rend_intergenic: 96672  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139541, rend_intergenic: 134087  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 152318, rend_intergenic: 146339  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154112, rend_intergenic: 153341  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160195, rend_intergenic: 154144  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170601, rend_intergenic: 164667  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172908, rend_intergenic: 172159  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176289, rend_intergenic: 173526  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177914, rend_intergenic: 177118  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182906, rend_intergenic: 181748  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184918, rend_intergenic: 183533  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188464, rend_intergenic: 185924  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189498, rend_intergenic: 188816  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191599, rend_intergenic: 189783  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205712, rend_intergenic: 197344  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 19 predictions persist after filtering for low support