-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_9/scaffold_9_11142363-11389042

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_23383-T1
Couldn't classify 158539, 158917
Couldn't classify 159544, 159629
Sorry, prediction pasa_asmbl_54327.p1 fails validation.
(CTC)	 CC	158539-158917	GT	TGG
(ACC)	 AG	159544-159629	GA	CAG
Valid prediction for CodingQuarry_transcript_62153-T1
Valid prediction for snap_scaffold_9-snap.2237-T1
Valid prediction for HiQ_model.g15671.t1
Valid prediction for snap_scaffold_9-snap.2236-T1
Valid prediction for snap_scaffold_9-snap.2228-T1
Couldn't classify 154449, 154544
Couldn't classify 158077, 158145
Sorry, prediction pasa_asmbl_54326.p1 fails validation.
(GGG)	 GT	154449-154544	GT	AGG
(GTG)	 AG	154638-154809	GT	AGG
(AGC)	 AG	155185-155328	GT	AGG
(ATA)	 AG	155709-155836	GT	AGG
(CCC)	 AG	156216-156370	GT	CAG
(GTC)	 AG	156694-156819	GT	AGG
(GGT)	 AG	156957-157104	GT	AGG
(ACA)	 AG	157206-157298	GT	AGG
(GTA)	 AG	157480-157914	GT	AGG
(GTC)	 AG	158077-158145	GG	AGG
-recovered pasa_asmbl_54326.p1, internal, 154638, 154809
-recovered pasa_asmbl_54326.p1, internal, 155185, 155328
-recovered pasa_asmbl_54326.p1, internal, 155709, 155836
-recovered pasa_asmbl_54326.p1, internal, 156216, 156370
-recovered pasa_asmbl_54326.p1, internal, 156694, 156819
-recovered pasa_asmbl_54326.p1, internal, 156957, 157104
-recovered pasa_asmbl_54326.p1, internal, 157206, 157298
-recovered pasa_asmbl_54326.p1, internal, 157480, 157914
Couldn't classify 205351, 205564
Couldn't classify 206448, 206569
Sorry, prediction pasa_asmbl_54751.p1 fails validation.
(CCT)	 AG	205351-205564	GT	AGG
(GTA)	 AG	206448-206569	CT	AGC
add_exon() Sorry, pasa_asmbl_54751.p1 205351-205564-terminal-3 is invalid.
-recovered pasa_asmbl_54751.p1, terminal, 205351, 205564
-recovered pasa_asmbl_54751.p1, internal, 205351, 205564
Valid prediction for GlimmerHMM_glimmerT_23382-T1
Valid prediction for snap_scaffold_9-snap.2233-T1
Valid prediction for GlimmerHMM_glimmerT_23391-T1
Valid prediction for snap_scaffold_9-snap.2244-T1
Valid prediction for snap_scaffold_9-snap.2245-T1
Valid prediction for snap_scaffold_9-snap.2235-T1
Valid prediction for GeneMark_model.40026_t
Valid prediction for Augustus_model.g15673.t1
Valid prediction for Augustus_model.g15668.t1
Valid prediction for pasa_asmbl_54334.p1
Valid prediction for CodingQuarry_transcript_62152-T1
Valid prediction for Augustus_model.g15669.t1
Valid prediction for GlimmerHMM_glimmerT_23385-T1
Valid prediction for GeneMark_model.40008_t
Valid prediction for GeneMark_model.39997_t
Valid prediction for Augustus_model.g15666.t1
Valid prediction for GlimmerHMM_glimmerT_23388-T1
Valid prediction for snap_scaffold_9-snap.2246-T1
Valid prediction for snap_scaffold_9-snap.2221-T1
Valid prediction for HiQ_model.g15664.t1
Valid prediction for GlimmerHMM_glimmerT_23390-T1
Valid prediction for GeneMark_model.40007_t
Valid prediction for GeneMark_model.40021_t
Valid prediction for GeneMark_model.40023_t
Couldn't classify 206725, 206823
Couldn't classify 211020, 211133
Sorry, prediction pasa_asmbl_54331.p1 fails validation.
(AAG)	 AG	206725-206823	GT	AGG
(GGG)	 AG	207316-207458	GT	CGG
(GTG)	 AG	209694-209763	GT	GCG
(GTG)	 AG	211020-211133	GA	TGG
-recovered pasa_asmbl_54331.p1, internal, 206725, 206823
-recovered pasa_asmbl_54331.p1, internal, 207316, 207458
-recovered pasa_asmbl_54331.p1, internal, 209694, 209763
Valid prediction for snap_scaffold_9-snap.2238-T1
Valid prediction for GeneMark_model.40010_t
Valid prediction for snap_scaffold_9-snap.2230-T1
Valid prediction for GlimmerHMM_glimmerT_23374-T1
Valid prediction for GlimmerHMM_glimmerT_23368-T1
Valid prediction for snap_scaffold_9-snap.2214-T1
Valid prediction for GlimmerHMM_glimmerT_23384-T1
Valid prediction for snap_scaffold_9-snap.2222-T1
Valid prediction for snap_scaffold_9-snap.2224-T1
Valid prediction for snap_scaffold_9-snap.2247-T1
Couldn't classify 182381, 182464
Sorry, prediction pasa_asmbl_54329.p1 fails validation.
(AAT)	 GA	182381-182464	GT	TGG
(AAT)	 AG	184702-184776	GT	AGG
(GTG)	 AG	185069-185275	GT	AGG
(GTG)	 AG	188276-188444	GT	TGG
(GAC)	 AG	190434-190536	GT	GGG
(CTA)	 AG	190730-190958	GT	AGG
(AGT)	 AG	192553-192654	GT	TGG
(GTT)	 AG	192744-192900	GT	GGG
(ATT)	 AG	193986-194059	TT	GAT
-recovered pasa_asmbl_54329.p1, terminal, 193986, 194059
-recovered pasa_asmbl_54329.p1, internal, 184702, 184776
-recovered pasa_asmbl_54329.p1, internal, 185069, 185275
-recovered pasa_asmbl_54329.p1, internal, 188276, 188444
-recovered pasa_asmbl_54329.p1, internal, 190434, 190536
-recovered pasa_asmbl_54329.p1, internal, 190730, 190958
-recovered pasa_asmbl_54329.p1, internal, 192553, 192654
-recovered pasa_asmbl_54329.p1, internal, 192744, 192900
Valid prediction for GeneMark_model.40002_t
Valid prediction for GeneMark_model.39992_t
Valid prediction for GeneMark_model.39993_t
Valid prediction for snap_scaffold_9-snap.2234-T1
Valid prediction for GeneMark_model.40011_t
Valid prediction for snap_scaffold_9-snap.2229-T1
Valid prediction for Augustus_model.g15667.t1
Couldn't classify 160011, 160157
Sorry, prediction pasa_asmbl_54328.p1 fails validation.
(GAC)	 AG	160011-160157	GT	ATG
(AGA)	 AG	160282-160344	GT	AGG
(GGT)	 AG	160464-160708	GT	TGG
(TGA)	 AG	160948-161032	GT	AGG
(ATC)	 AG	161132-161285	GT	AGG
(GTT)	 AG	161398-161537	GT	AGG
(GCT)	 AG	161711-161791	GT	ATG
(ATG)	 AG	161890-162015	GT	ATG
(AGT)	 AG	162218-162339	GT	AGG
(TCA)	 AG	162456-162549	GT	AGG
(GTG)	 AG	162656-162790	GT	AGG
(TTC)	 AG	162972-163045	GT	AGG
(CCA)	 AG	163290-163419	TG	AAT
-recovered pasa_asmbl_54328.p1, initial, 161890, 162015
-recovered pasa_asmbl_54328.p1, terminal, 163290, 163419
-recovered pasa_asmbl_54328.p1, internal, 160011, 160157
-recovered pasa_asmbl_54328.p1, internal, 160282, 160344
-recovered pasa_asmbl_54328.p1, internal, 160464, 160708
-recovered pasa_asmbl_54328.p1, internal, 160948, 161032
-recovered pasa_asmbl_54328.p1, internal, 161132, 161285
-recovered pasa_asmbl_54328.p1, internal, 161398, 161537
-recovered pasa_asmbl_54328.p1, internal, 161711, 161791
-recovered pasa_asmbl_54328.p1, internal, 161890, 162015
-recovered pasa_asmbl_54328.p1, internal, 162218, 162339
-recovered pasa_asmbl_54328.p1, internal, 162456, 162549
-recovered pasa_asmbl_54328.p1, internal, 162656, 162790
-recovered pasa_asmbl_54328.p1, internal, 162972, 163045
Valid prediction for HiQ_model.g15655.t1
Valid prediction for GeneMark_model.39995_t
Valid prediction for snap_scaffold_9-snap.2211-T1
Valid prediction for CodingQuarry_transcript_62154-T1
Valid prediction for snap_scaffold_9-snap.2220-T1
Valid prediction for GeneMark_model.39989_t
Couldn't classify 221624, 222219
Couldn't classify 223036, 223222
Sorry, prediction pasa_asmbl_54336.p1 fails validation.
(GAG)	 CA	221624-222219	GT	GGG
(GGC)	 AG	222588-222629	GT	AGG
(ACG)	 AG	223036-223222	AC	CCA
-recovered pasa_asmbl_54336.p1, internal, 222588, 222629
Valid prediction for GeneMark_model.40024_t
Valid prediction for snap_scaffold_9-snap.2239-T1
Valid prediction for snap_scaffold_9-snap.2249-T1
Valid prediction for CodingQuarry_transcript_62148-T1
Valid prediction for GlimmerHMM_glimmerT_23387-T1
Valid prediction for GeneMark_model.40019_t
Valid prediction for GeneMark_model.40017_t
Valid prediction for pasa_asmbl_54325.p2
Valid prediction for snap_scaffold_9-snap.2243-T1
Valid prediction for GeneMark_model.40006_t
Valid prediction for GeneMark_model.40012_t
Valid prediction for pasa_asmbl_54337.p1
Valid prediction for Augustus_model.g15665.t1
Valid prediction for Augustus_model.g15670.t1
Valid prediction for snap_scaffold_9-snap.2231-T1
Valid prediction for snap_scaffold_9-snap.2219-T1
Valid prediction for GeneMark_model.40015_t
Valid prediction for Augustus_model.g15672.t1
Valid prediction for GlimmerHMM_glimmerT_23381-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_9-snap.2213-T1
Valid prediction for snap_scaffold_9-snap.2218-T1
Valid prediction for GeneMark_model.39988_t
Valid prediction for GeneMark_model.39996_t
Valid prediction for GlimmerHMM_glimmerT_23377-T1
Valid prediction for GeneMark_model.40020_t
Valid prediction for GeneMark_model.40013_t
Valid prediction for GeneMark_model.40005_t
Valid prediction for GlimmerHMM_glimmerT_23369-T1
Valid prediction for snap_scaffold_9-snap.2242-T1
Valid prediction for snap_scaffold_9-snap.2232-T1
Valid prediction for GeneMark_model.39994_t
Valid prediction for GeneMark_model.40003_t
Valid prediction for GeneMark_model.39987_t
Valid prediction for GeneMark_model.40000_t
Valid prediction for CodingQuarry_transcript_62150-T1
Valid prediction for Augustus_model.g15675.t1
Valid prediction for snap_scaffold_9-snap.2227-T1
Valid prediction for Augustus_model.g15674.t1
Valid prediction for GeneMark_model.40028_t
Valid prediction for HiQ_model.g15660.t1
Valid prediction for GlimmerHMM_glimmerT_23367-T1
Valid prediction for GeneMark_model.39998_t
Valid prediction for GlimmerHMM_glimmerT_23372-T1
Valid prediction for CodingQuarry_transcript_62149-T1
Couldn't classify 181385, 181711
Sorry, prediction pasa_asmbl_55773.p1 fails validation.
(GTG)	 AG	181385-181711	GC	CGG
-recovered pasa_asmbl_55773.p1, internal, 181385, 181711
Valid prediction for GeneMark_model.40016_t
Valid prediction for GlimmerHMM_glimmerT_23378-T1
Valid prediction for GeneMark_model.40029_t
Valid prediction for GeneMark_model.40018_t
Valid prediction for GlimmerHMM_glimmerT_23389-T1
Valid prediction for GlimmerHMM_glimmerT_23373-T1
Valid prediction for snap_scaffold_9-snap.2240-T1
Valid prediction for Augustus_model.g15662.t1
Valid prediction for GeneMark_model.39999_t
Couldn't classify 146851, 146893
Sorry, prediction pasa_asmbl_55245.p1 fails validation.
(ATG)	 AC	139772-139806	GT	AGG
(AGT)	 AG	141329-141407	GT	AGG
(AGG)	 AG	141620-141763	GT	ACG
(GTG)	 AG	142045-142187	GT	AGG
(GAT)	 AG	142443-142584	GT	GGG
(AAG)	 AG	142944-143039	GT	GGG
(CCA)	 AG	143226-143320	GT	AAG
(GAA)	 AG	144296-144538	GT	AAG
(GAC)	 AG	145417-145564	GT	AGG
(TTG)	 AG	146019-146101	GT	ACG
(TGT)	 AG	146198-146276	GT	AGG
(ATG)	 AG	146619-146767	GT	AAG
(TTC)	 AG	146851-146893	CC	AGC
-recovered pasa_asmbl_55245.p1, initial, 139772, 139806
-recovered pasa_asmbl_55245.p1, initial, 146619, 146767
-recovered pasa_asmbl_55245.p1, terminal, 143226, 143320
-recovered pasa_asmbl_55245.p1, internal, 141329, 141407
-recovered pasa_asmbl_55245.p1, internal, 141620, 141763
-recovered pasa_asmbl_55245.p1, internal, 142045, 142187
-recovered pasa_asmbl_55245.p1, internal, 142443, 142584
-recovered pasa_asmbl_55245.p1, internal, 142944, 143039
-recovered pasa_asmbl_55245.p1, internal, 143226, 143320
-recovered pasa_asmbl_55245.p1, internal, 144296, 144538
-recovered pasa_asmbl_55245.p1, internal, 145417, 145564
-recovered pasa_asmbl_55245.p1, internal, 146019, 146101
-recovered pasa_asmbl_55245.p1, internal, 146198, 146276
-recovered pasa_asmbl_55245.p1, internal, 146619, 146767
Valid prediction for GeneMark_model.40022_t
Valid prediction for GlimmerHMM_glimmerT_23380-T1
Valid prediction for snap_scaffold_9-snap.2215-T1
Valid prediction for pasa_asmbl_55246.p1
Valid prediction for GeneMark_model.40014_t
Valid prediction for GlimmerHMM_glimmerT_23393-T1
Valid prediction for Augustus_model.g15663.t1
Valid prediction for GlimmerHMM_glimmerT_23376-T1
Valid prediction for snap_scaffold_9-snap.2223-T1
Valid prediction for snap_scaffold_9-snap.2226-T1
Valid prediction for GeneMark_model.39991_t
Valid prediction for Augustus_model.g15658.t1
Valid prediction for Augustus_model.g15657.t1
Valid prediction for GlimmerHMM_glimmerT_23392-T1
Valid prediction for GlimmerHMM_glimmerT_23375-T1
Valid prediction for Augustus_model.g15656.t1
Valid prediction for GeneMark_model.40027_t
Valid prediction for GlimmerHMM_glimmerT_23379-T1
Valid prediction for snap_scaffold_9-snap.2241-T1
Valid prediction for GlimmerHMM_glimmerT_23386-T1
Valid prediction for snap_scaffold_9-snap.2250-T1
Valid prediction for snap_scaffold_9-snap.2225-T1
Valid prediction for Augustus_model.g15659.t1
Valid prediction for GlimmerHMM_glimmerT_23371-T1
Valid prediction for GeneMark_model.40001_t
Valid prediction for GeneMark_model.40025_t
Valid prediction for GeneMark_model.40009_t
Valid prediction for snap_scaffold_9-snap.2217-T1
Valid prediction for pasa_asmbl_55243.p1
Valid prediction for GeneMark_model.39990_t
Valid prediction for snap_scaffold_9-snap.2216-T1
Valid prediction for snap_scaffold_9-snap.2248-T1
Valid prediction for Augustus_model.g15661.t1
Couldn't classify 2489, 2585
Sorry, prediction pasa_asmbl_55247.p1 fails validation.
(GAC)	 AG	2489-2585	GT	AGG
(GAG)	 AG	2678-2764	GT	AGG
(AAC)	 AG	2855-2978	GT	TGG
(CTG)	 AG	3281-3415	GT	GGG
(TCT)	 AG	4030-4147	GT	AGG
(ATC)	 AG	4318-4419	GT	AGG
(GAC)	 AG	5006-5102	GT	AGG
(TGG)	 AG	5276-5438	GT	AAG
(TAA)	 AG	5633-5732	GT	AGG
(TTG)	 AG	7085-7153	CC	AAC
-recovered pasa_asmbl_55247.p1, terminal, 7085, 7153
-recovered pasa_asmbl_55247.p1, internal, 2489, 2585
-recovered pasa_asmbl_55247.p1, internal, 2678, 2764
-recovered pasa_asmbl_55247.p1, internal, 2855, 2978
-recovered pasa_asmbl_55247.p1, internal, 3281, 3415
-recovered pasa_asmbl_55247.p1, internal, 4030, 4147
-recovered pasa_asmbl_55247.p1, internal, 4318, 4419
-recovered pasa_asmbl_55247.p1, internal, 5006, 5102
-recovered pasa_asmbl_55247.p1, internal, 5276, 5438
-recovered pasa_asmbl_55247.p1, internal, 5633, 5732
Valid prediction for GlimmerHMM_glimmerT_23370-T1
Valid prediction for snap_scaffold_9-snap.2212-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7343, rend_intergenic: 4030  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33992, rend_intergenic: 31157  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114442, rend_intergenic: 99977  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 194059, rend_intergenic: 179974  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 246680
-exon list size: 511


building trellis

0.2    
0.4    
0.6    
0.8    
1.0    
1.2    
1.4    
1.6    
1.8    
1.9    
2.1    
2.3    
2.5    
2.7    
2.9    
3.1    
3.3    
3.5    
3.7    
3.9    
4.1    
4.3    
4.5    
4.7    
4.9    
5.1    
5.3    
5.5    
5.7    
5.8    
6.0    
6.2    
6.4    
6.6    
6.8    
7.0    
7.2    
7.4    
7.6    
7.8    
8.0    
8.2    
8.4    
8.6    
8.8    
9.0    
9.2    
9.4    
9.6    
9.7    
9.9    
10.1    
10.3    
10.5    
10.7    
10.9    
11.1    
11.3    
11.5    
11.7    
11.9    
12.1    
12.3    
12.5    
12.7    
12.9    
13.1    
13.3    
13.5    
13.6    
13.8    
14.0    
14.2    
14.4    
14.6    
14.8    
15.0    
15.2    
15.4    
15.6    
15.8    
16.0    
16.2    
16.4    
16.6    
16.8    
17.0    
17.2    
17.3    
17.5    
17.7    
17.9    
18.1    
18.3    
18.5    
18.7    
18.9    
19.1    
19.3    
19.5    
19.7    
19.9    
20.1    
20.3    
20.5    
20.7    
20.9    
21.1    
21.2    
21.4    
21.6    
21.8    
22.0    
22.2    
22.4    
22.6    
22.8    
23.0    
23.2    
23.4    
23.6    
23.8    
24.0    
24.2    
24.4    
24.6    
24.8    
25.0    
25.1    
25.3    
25.5    
25.7    
25.9    
26.1    
26.3    
26.5    
26.7    
26.9    
27.1    
27.3    
27.5    
27.7    
27.9    
28.1    
28.3    
28.5    
28.7    
28.8    
29.0    
29.2    
29.4    
29.6    
29.8    
30.0    
30.2    
30.4    
30.6    
30.8    
31.0    
31.2    
31.4    
31.6    
31.8    
32.0    
32.2    
32.4    
32.6    
32.7    
32.9    
33.1    
33.3    
33.5    
33.7    
33.9    
34.1    
34.3    
34.5    
34.7    
34.9    
35.1    
35.3    
35.5    
35.7    
35.9    
36.1    
36.3    
36.5    
36.6    
36.8    
37.0    
37.2    
37.4    
37.6    
37.8    
38.0    
38.2    
38.4    
38.6    
38.8    
39.0    
39.2    
39.4    
39.6    
39.8    
40.0    
40.2    
40.4    
40.5    
40.7    
40.9    
41.1    
41.3    
41.5    
41.7    
41.9    
42.1    
42.3    
42.5    
42.7    
42.9    
43.1    
43.3    
43.5    
43.7    
43.9    
44.1    
44.2    
44.4    
44.6    
44.8    
45.0    
45.2    
45.4    
45.6    
45.8    
46.0    
46.2    
46.4    
46.6    
46.8    
47.0    
47.2    
47.4    
47.6    
47.8    
48.0    
48.1    
48.3    
48.5    
48.7    
48.9    
49.1    
49.3    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.7    
50.9    
51.1    
51.3    
51.5    
51.7    
51.9    
52.0    
52.2    
52.4    
52.6    
52.8    
53.0    
53.2    
53.4    
53.6    
53.8    
54.0    
54.2    
54.4    
54.6    
54.8    
55.0    
55.2    
55.4    
55.6    
55.8    
55.9    
56.1    
56.3    
56.5    
56.7    
56.9    
57.1    
57.3    
57.5    
57.7    
57.9    
58.1    
58.3    
58.5    
58.7    
58.9    
59.1    
59.3    
59.5    
59.6    
59.8    
60.0    
60.2    
60.4    
60.6    
60.8    
61.0    
61.2    
61.4    
61.6    
61.8    
62.0    
62.2    
62.4    
62.6    
62.8    
63.0    
63.2    
63.4    
63.5    
63.7    
63.9    
64.1    
64.3    
64.5    
64.7    
64.9    
65.1    
65.3    
65.5    
65.7    
65.9    
66.1    
66.3    
66.5    
66.7    
66.9    
67.1    
67.3    
67.4    
67.6    
67.8    
68.0    
68.2    
68.4    
68.6    
68.8    
69.0    
69.2    
69.4    
69.6    
69.8    
70.0    
70.2    
70.4    
70.6    
70.8    
71.0    
71.2    
71.3    
71.5    
71.7    
71.9    
72.1    
72.3    
72.5    
72.7    
72.9    
73.1    
73.3    
73.5    
73.7    
73.9    
74.1    
74.3    
74.5    
74.7    
74.9    
75.0    
75.2    
75.4    
75.6    
75.8    
76.0    
76.2    
76.4    
76.6    
76.8    
77.0    
77.2    
77.4    
77.6    
77.8    
78.0    
78.2    
78.4    
78.6    
78.8    
78.9    
79.1    
79.3    
79.5    
79.7    
79.9    
80.1    
80.3    
80.5    
80.7    
80.9    
81.1    
81.3    
81.5    
81.7    
81.9    
82.1    
82.3    
82.5    
82.7    
82.8    
83.0    
83.2    
83.4    
83.6    
83.8    
84.0    
84.2    
84.4    
84.6    
84.8    
85.0    
85.2    
85.4    
85.6    
85.8    
86.0    
86.2    
86.4    
86.5    
86.7    
86.9    
87.1    
87.3    
87.5    
87.7    
87.9    
88.1    
88.3    
88.5    
88.7    
88.9    
89.1    
89.3    
89.5    
89.7    
89.9    
90.1    
90.3    
90.4    
90.6    
90.8    
91.0    
91.2    
91.4    
91.6    
91.8    
92.0    
92.2    
92.4    
92.6    
92.8    
93.0    
93.2    
93.4    
93.6    
93.8    
94.0    
94.2    
94.3    
94.5    
94.7    
94.9    
95.1    
95.3    
95.5    
95.7    
95.9    
96.1    
96.3    
96.5    
96.7    
96.9    
97.1    
97.3    
97.5    
97.7    
97.9    
98.1    
98.2    
98.4    
98.6    
98.8    
99.0    
99.2    
99.4    
99.6    
99.8    
-found 33 predictions from path traversal
Error with prediction: snap lend_intergenic: 7343, rend_intergenic: 4030  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33992, rend_intergenic: 31157  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114442, rend_intergenic: 99977  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 194059, rend_intergenic: 179974  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 26 predictions persist after filtering for low support