-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_819

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 2321, 2449
Sorry, prediction snap_scaffold_819-snap.1-T1 fails validation.
(AAC)	 AG	2321-2449	GT	GGG
(AGC)	 AG	3639-3777	TC	GAT
-recovered snap_scaffold_819-snap.1-T1, terminal, 3639, 3777
-recovered snap_scaffold_819-snap.1-T1, internal, 2321, 2449
Couldn't classify 1562, 1579
Couldn't classify 3634, 3773
Sorry, prediction GeneMark_model.108434_t fails validation.
(GAG)	 AG	1562-1579	GT	AGG
(GGC)	 AG	2361-2469	GT	GCG
(GGC)	 AG	3634-3773	GT	ACG
-recovered GeneMark_model.108434_t, internal, 1562, 1579
-recovered GeneMark_model.108434_t, internal, 2361, 2469
-recovered GeneMark_model.108434_t, internal, 3634, 3773

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4334
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support