-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_8/scaffold_8_475960-769518 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_8-snap.132-T1 Valid prediction for Augustus_model.g13144.t1 Valid prediction for snap_scaffold_8-snap.137-T1 Valid prediction for GeneMark_model.33162_t Valid prediction for snap_scaffold_8-snap.121-T1 Valid prediction for GlimmerHMM_glimmerT_19578-T1 Valid prediction for GeneMark_model.33166_t Valid prediction for snap_scaffold_8-snap.94-T1 Valid prediction for GlimmerHMM_glimmerT_19590-T1 Valid prediction for GlimmerHMM_glimmerT_19565-T1 Valid prediction for snap_scaffold_8-snap.99-T1 Valid prediction for GeneMark_model.33171_t Valid prediction for CodingQuarry_transcript_59444-T1 Valid prediction for GeneMark_model.33210_t Valid prediction for GlimmerHMM_glimmerT_19576-T1 Valid prediction for GeneMark_model.33196_t Valid prediction for GeneMark_model.33195_t Valid prediction for GeneMark_model.33234_t Valid prediction for GlimmerHMM_glimmerT_19589-T1 Valid prediction for GlimmerHMM_glimmerT_19587-T1 Couldn't classify 246559, 246631 Sorry, prediction pasa_asmbl_51650.p1 fails validation. (ATG) AC 241998-242021 GT TTG (GGC) AG 242573-242799 GT CAG (GTT) AG 243408-243530 GT AAG (GTA) AG 245998-246075 GT AGG (GCA) AG 246559-246631 TA GAT -recovered pasa_asmbl_51650.p1, initial, 241998, 242021 -recovered pasa_asmbl_51650.p1, internal, 242573, 242799 -recovered pasa_asmbl_51650.p1, internal, 243408, 243530 -recovered pasa_asmbl_51650.p1, internal, 245998, 246075 Valid prediction for GeneMark_model.33183_t Valid prediction for GlimmerHMM_glimmerT_19574-T1 Valid prediction for GeneMark_model.33229_t Valid prediction for GeneMark_model.33242_t Valid prediction for snap_scaffold_8-snap.113-T1 Valid prediction for Augustus_model.g13149.t1 Valid prediction for snap_scaffold_8-snap.116-T1 Valid prediction for snap_scaffold_8-snap.106-T1 Valid prediction for GeneMark_model.33197_t add_exon() Sorry, GeneMark_model.33197_t 137662-137833-terminal-1 is invalid. Valid prediction for GeneMark_model.33215_t Valid prediction for snap_scaffold_8-snap.117-T1 Valid prediction for GeneMark_model.33158_t Valid prediction for Augustus_model.g13150.t1 Couldn't classify 271578, 271790 Sorry, prediction pasa_asmbl_51654.p1 fails validation. (ATG) CC 262730-262774 GT CTG (GCC) AG 264055-264216 GT AGG (GCG) AG 264650-264775 GT AGG (CAG) AG 264986-265102 GT AGG (ACA) AG 265579-265740 GT AGG (ATG) AG 267068-267247 GT ACG (ATC) AG 267942-268064 GT AGG (CTC) AG 268366-268479 GT AGG (GAG) AG 269243-269531 GT GGG (TAC) AG 269761-269876 GT AGG (GGT) AG 270011-270128 GT CGG (ATG) AG 270384-270475 GT AGG (GCC) AG 271578-271790 AA TCA -recovered pasa_asmbl_51654.p1, initial, 262730, 262774 -recovered pasa_asmbl_51654.p1, initial, 267068, 267247 add_exon() Sorry, pasa_asmbl_51654.p1 270384-270475-initial-1 is invalid. -recovered pasa_asmbl_51654.p1, initial, 270384, 270475 -recovered pasa_asmbl_51654.p1, internal, 264055, 264216 -recovered pasa_asmbl_51654.p1, internal, 264650, 264775 -recovered pasa_asmbl_51654.p1, internal, 264986, 265102 -recovered pasa_asmbl_51654.p1, internal, 265579, 265740 -recovered pasa_asmbl_51654.p1, internal, 267068, 267247 -recovered pasa_asmbl_51654.p1, internal, 267942, 268064 -recovered pasa_asmbl_51654.p1, internal, 268366, 268479 -recovered pasa_asmbl_51654.p1, internal, 269243, 269531 -recovered pasa_asmbl_51654.p1, internal, 269761, 269876 -recovered pasa_asmbl_51654.p1, internal, 270011, 270128 -recovered pasa_asmbl_51654.p1, internal, 270384, 270475 Valid prediction for GeneMark_model.33240_t Valid prediction for GeneMark_model.33191_t Valid prediction for GeneMark_model.33182_t Valid prediction for GeneMark_model.33231_t Valid prediction for GlimmerHMM_glimmerT_19567-T1 Valid prediction for GlimmerHMM_glimmerT_19562-T1 Valid prediction for snap_scaffold_8-snap.101-T1 Valid prediction for GeneMark_model.33175_t Valid prediction for GeneMark_model.33188_t Valid prediction for GlimmerHMM_glimmerT_19575-T1 Valid prediction for GeneMark_model.33227_t Valid prediction for snap_scaffold_8-snap.122-T1 Valid prediction for snap_scaffold_8-snap.135-T1 Valid prediction for snap_scaffold_8-snap.119-T1 Valid prediction for GeneMark_model.33208_t Valid prediction for pasa_asmbl_52611.p1 Valid prediction for snap_scaffold_8-snap.126-T1 Valid prediction for GlimmerHMM_glimmerT_19580-T1 Valid prediction for GlimmerHMM_glimmerT_19572-T1 Valid prediction for snap_scaffold_8-snap.108-T1 Couldn't classify 248549, 248616 Couldn't classify 250376, 250423 Sorry, prediction pasa_asmbl_51651.p1 fails validation. (CAG) TA 248549-248616 GT GGG (CCC) AG 249035-249194 GT ACG (GGC) AG 249702-249827 GT GGG (GTG) AG 250376-250423 GT GTG -recovered pasa_asmbl_51651.p1, internal, 249035, 249194 -recovered pasa_asmbl_51651.p1, internal, 249702, 249827 -recovered pasa_asmbl_51651.p1, internal, 250376, 250423 Valid prediction for GlimmerHMM_glimmerT_19583-T1 Valid prediction for GeneMark_model.33177_t Valid prediction for CodingQuarry_transcript_59446-T1 Valid prediction for CodingQuarry_transcript_59445-T1 Valid prediction for GeneMark_model.33204_t Valid prediction for GeneMark_model.33220_t Valid prediction for GeneMark_model.33225_t Valid prediction for snap_scaffold_8-snap.104-T1 Valid prediction for Augustus_model.g13147.t1 Valid prediction for GlimmerHMM_glimmerT_19581-T1 Valid prediction for snap_scaffold_8-snap.111-T1 Valid prediction for snap_scaffold_8-snap.98-T1 Valid prediction for GeneMark_model.33222_t Valid prediction for GeneMark_model.33206_t Valid prediction for GlimmerHMM_glimmerT_19582-T1 Valid prediction for HiQ_model.g13146.t1 Valid prediction for snap_scaffold_8-snap.110-T1 Valid prediction for GeneMark_model.33173_t Valid prediction for GeneMark_model.33236_t Valid prediction for GeneMark_model.33212_t Valid prediction for snap_scaffold_8-snap.140-T1 Valid prediction for Augustus_model.g13145.t1 Valid prediction for CodingQuarry_transcript_59442-T1 Valid prediction for GeneMark_model.33168_t Valid prediction for GlimmerHMM_glimmerT_19586-T1 Valid prediction for GeneMark_model.33161_t Valid prediction for snap_scaffold_8-snap.103-T1 Valid prediction for GlimmerHMM_glimmerT_19577-T1 Valid prediction for Augustus_model.g13151.t1 Valid prediction for GeneMark_model.33217_t Valid prediction for GeneMark_model.33238_t Valid prediction for GeneMark_model.33243_t Valid prediction for GeneMark_model.33193_t Valid prediction for GeneMark_model.33169_t Valid prediction for GeneMark_model.33213_t Valid prediction for GeneMark_model.33237_t Valid prediction for GlimmerHMM_glimmerT_19570-T1 Valid prediction for GeneMark_model.33232_t Couldn't classify 279317, 279367 Sorry, prediction pasa_asmbl_51659.p1 fails validation. (CAG) TA 279317-279367 GT AGG (AGC) AG 280208-280317 GT GGG (ACT) AG 280739-280907 GT GCG (CTC) AG 281003-281107 GT AGG (GCT) AG 281232-285575 GT AGG (AAG) AG 285729-285829 GT AGG (GCT) AG 286245-286355 GT AGG (TGA) AG 286553-286655 GT AGG (GTG) AG 286979-287137 CC AGC -recovered pasa_asmbl_51659.p1, terminal, 286979, 287137 -recovered pasa_asmbl_51659.p1, internal, 280208, 280317 -recovered pasa_asmbl_51659.p1, internal, 280739, 280907 -recovered pasa_asmbl_51659.p1, internal, 281003, 281107 -recovered pasa_asmbl_51659.p1, internal, 281232, 285575 -recovered pasa_asmbl_51659.p1, internal, 285729, 285829 -recovered pasa_asmbl_51659.p1, internal, 286245, 286355 -recovered pasa_asmbl_51659.p1, internal, 286553, 286655 Valid prediction for CodingQuarry_transcript_59443-T1 Valid prediction for GlimmerHMM_glimmerT_19584-T1 Valid prediction for Augustus_model.g13148.t1 Valid prediction for GlimmerHMM_glimmerT_19571-T1 Valid prediction for CodingQuarry_transcript_59447-T1 Valid prediction for GeneMark_model.33186_t Valid prediction for snap_scaffold_8-snap.142-T1 Valid prediction for GlimmerHMM_glimmerT_19588-T1 Valid prediction for snap_scaffold_8-snap.129-T1 Valid prediction for GeneMark_model.33179_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_19568-T1 Valid prediction for GeneMark_model.33156_t Valid prediction for Augustus_model.g13140.t1 Valid prediction for snap_scaffold_8-snap.136-T1 Valid prediction for GeneMark_model.33155_t Valid prediction for GeneMark_model.33226_t Valid prediction for GeneMark_model.33218_t Valid prediction for GeneMark_model.33214_t Valid prediction for GeneMark_model.33178_t Valid prediction for GeneMark_model.33203_t Valid prediction for Augustus_model.g13141.t1 Valid prediction for GeneMark_model.33160_t Valid prediction for snap_scaffold_8-snap.143-T1 Valid prediction for GeneMark_model.33163_t Valid prediction for GeneMark_model.33172_t Valid prediction for GeneMark_model.33198_t Valid prediction for snap_scaffold_8-snap.97-T1 Valid prediction for GeneMark_model.33201_t Valid prediction for GeneMark_model.33211_t Valid prediction for snap_scaffold_8-snap.134-T1 Valid prediction for GeneMark_model.33174_t Valid prediction for snap_scaffold_8-snap.109-T1 Valid prediction for GeneMark_model.33241_t Valid prediction for GeneMark_model.33233_t Valid prediction for snap_scaffold_8-snap.102-T1 Valid prediction for GeneMark_model.33228_t Valid prediction for GeneMark_model.33192_t Valid prediction for GeneMark_model.33170_t Valid prediction for snap_scaffold_8-snap.139-T1 Valid prediction for GeneMark_model.33202_t Valid prediction for snap_scaffold_8-snap.131-T1 Valid prediction for snap_scaffold_8-snap.93-T1 Valid prediction for GeneMark_model.33219_t Valid prediction for GeneMark_model.33230_t Valid prediction for GeneMark_model.33221_t Valid prediction for GeneMark_model.33194_t Valid prediction for GeneMark_model.33176_t Valid prediction for snap_scaffold_8-snap.141-T1 Valid prediction for GeneMark_model.33181_t Valid prediction for snap_scaffold_8-snap.120-T1 Valid prediction for snap_scaffold_8-snap.130-T1 Valid prediction for GeneMark_model.33207_t Valid prediction for GlimmerHMM_glimmerT_19573-T1 Valid prediction for snap_scaffold_8-snap.124-T1 Valid prediction for snap_scaffold_8-snap.123-T1 Valid prediction for snap_scaffold_8-snap.114-T1 Valid prediction for GeneMark_model.33184_t Valid prediction for GlimmerHMM_glimmerT_19569-T1 Valid prediction for GlimmerHMM_glimmerT_19561-T1 Valid prediction for GlimmerHMM_glimmerT_19585-T1 Valid prediction for snap_scaffold_8-snap.115-T1 Valid prediction for GeneMark_model.33185_t Valid prediction for GeneMark_model.33157_t Valid prediction for GlimmerHMM_glimmerT_19563-T1 Valid prediction for snap_scaffold_8-snap.100-T1 Valid prediction for GlimmerHMM_glimmerT_19579-T1 Valid prediction for GeneMark_model.33165_t Valid prediction for GeneMark_model.33224_t Valid prediction for snap_scaffold_8-snap.105-T1 Valid prediction for snap_scaffold_8-snap.133-T1 Valid prediction for GeneMark_model.33189_t Valid prediction for snap_scaffold_8-snap.125-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for GeneMark_model.33199_t Valid prediction for GeneMark_model.33223_t Valid prediction for GlimmerHMM_glimmerT_19566-T1 Valid prediction for GeneMark_model.33205_t Valid prediction for Augustus_model.g13143.t1 Valid prediction for GlimmerHMM_glimmerT_19560-T1 Valid prediction for snap_scaffold_8-snap.107-T1 Valid prediction for GeneMark_model.33187_t Valid prediction for snap_scaffold_8-snap.95-T1 Valid prediction for snap_scaffold_8-snap.96-T1 Valid prediction for snap_scaffold_8-snap.112-T1 Valid prediction for snap_scaffold_8-snap.127-T1 Valid prediction for GeneMark_model.33167_t Valid prediction for GeneMark_model.33239_t Valid prediction for GeneMark_model.33180_t Valid prediction for GeneMark_model.33235_t Valid prediction for snap_scaffold_8-snap.128-T1 Valid prediction for GeneMark_model.33216_t Valid prediction for GeneMark_model.33164_t Valid prediction for snap_scaffold_8-snap.138-T1 Valid prediction for GeneMark_model.33159_t Valid prediction for snap_scaffold_8-snap.118-T1 Valid prediction for GeneMark_model.33154_t Valid prediction for GeneMark_model.33190_t Valid prediction for Augustus_model.g13142.t1 Valid prediction for GlimmerHMM_glimmerT_19564-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 8855, rend_intergenic: 3181 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28447, rend_intergenic: 10665 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43587, rend_intergenic: 32666 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 48172, rend_intergenic: 43830 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 61559, rend_intergenic: 50325 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65234, rend_intergenic: 62383 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75390, rend_intergenic: 67525 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82348, rend_intergenic: 75507 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 93958, rend_intergenic: 86813 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97008, rend_intergenic: 94251 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 101810, rend_intergenic: 98385 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 109812, rend_intergenic: 102092 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 125058, rend_intergenic: 115573 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153613, rend_intergenic: 126473 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 168220, rend_intergenic: 158914 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 191080, rend_intergenic: 169397 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 192182, rend_intergenic: 191116 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 210073, rend_intergenic: 194979 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 217793, rend_intergenic: 210103 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 219847, rend_intergenic: 219844 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 237317, rend_intergenic: 227681 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 251795, rend_intergenic: 243110 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 254879, rend_intergenic: 252110 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 278247, rend_intergenic: 263347 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 285605, rend_intergenic: 284760 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 288595, rend_intergenic: 285685 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 291467, rend_intergenic: 289743 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 219847, rend_intergenic: 219844 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 293559 -exon list size: 1209 building trellis 0.1 0.2 0.2 0.3 0.4 0.5 0.6 0.7 0.7 0.8 0.9 1.0 1.1 1.2 1.2 1.3 1.4 1.5 1.6 1.7 1.7 1.8 1.9 2.0 2.1 2.1 2.2 2.3 2.4 2.5 2.6 2.6 2.7 2.8 2.9 3.0 3.1 3.1 3.2 3.3 3.4 3.5 3.6 3.6 3.7 3.8 3.9 4.0 4.0 4.1 4.2 4.3 4.4 4.5 4.5 4.6 4.7 4.8 4.9 5.0 5.0 5.1 5.2 5.3 5.4 5.5 5.5 5.6 5.7 5.8 5.9 5.9 6.0 6.1 6.2 6.3 6.4 6.4 6.5 6.6 6.7 6.8 6.9 6.9 7.0 7.1 7.2 7.3 7.3 7.4 7.5 7.6 7.7 7.8 7.8 7.9 8.0 8.1 8.2 8.3 8.3 8.4 8.5 8.6 8.7 8.8 8.8 8.9 9.0 9.1 9.2 9.2 9.3 9.4 9.5 9.6 9.7 9.7 9.8 9.9 10.0 10.1 10.2 10.2 10.3 10.4 10.5 10.6 10.7 10.7 10.8 10.9 11.0 11.1 11.1 11.2 11.3 11.4 11.5 11.6 11.6 11.7 11.8 11.9 12.0 12.1 12.1 12.2 12.3 12.4 12.5 12.6 12.6 12.7 12.8 12.9 13.0 13.0 13.1 13.2 13.3 13.4 13.5 13.5 13.6 13.7 13.8 13.9 14.0 14.0 14.1 14.2 14.3 14.4 14.5 14.5 14.6 14.7 14.8 14.9 14.9 15.0 15.1 15.2 15.3 15.4 15.4 15.5 15.6 15.7 15.8 15.9 15.9 16.0 16.1 16.2 16.3 16.4 16.4 16.5 16.6 16.7 16.8 16.8 16.9 17.0 17.1 17.2 17.3 17.3 17.4 17.5 17.6 17.7 17.8 17.8 17.9 18.0 18.1 18.2 18.2 18.3 18.4 18.5 18.6 18.7 18.7 18.8 18.9 19.0 19.1 19.2 19.2 19.3 19.4 19.5 19.6 19.7 19.7 19.8 19.9 20.0 20.1 20.1 20.2 20.3 20.4 20.5 20.6 20.6 20.7 20.8 20.9 21.0 21.1 21.1 21.2 21.3 21.4 21.5 21.6 21.6 21.7 21.8 21.9 22.0 22.0 22.1 22.2 22.3 22.4 22.5 22.5 22.6 22.7 22.8 22.9 23.0 23.0 23.1 23.2 23.3 23.4 23.5 23.5 23.6 23.7 23.8 23.9 23.9 24.0 24.1 24.2 24.3 24.4 24.4 24.5 24.6 24.7 24.8 24.9 24.9 25.0 25.1 25.2 25.3 25.4 25.4 25.5 25.6 25.7 25.8 25.8 25.9 26.0 26.1 26.2 26.3 26.3 26.4 26.5 26.6 26.7 26.8 26.8 26.9 27.0 27.1 27.2 27.3 27.3 27.4 27.5 27.6 27.7 27.7 27.8 27.9 28.0 28.1 28.2 28.2 28.3 28.4 28.5 28.6 28.7 28.7 28.8 28.9 29.0 29.1 29.1 29.2 29.3 29.4 29.5 29.6 29.6 29.7 29.8 29.9 30.0 30.1 30.1 30.2 30.3 30.4 30.5 30.6 30.6 30.7 30.8 30.9 31.0 31.0 31.1 31.2 31.3 31.4 31.5 31.5 31.6 31.7 31.8 31.9 32.0 32.0 32.1 32.2 32.3 32.4 32.5 32.5 32.6 32.7 32.8 32.9 32.9 33.0 33.1 33.2 33.3 33.4 33.4 33.5 33.6 33.7 33.8 33.9 33.9 34.0 34.1 34.2 34.3 34.4 34.4 34.5 34.6 34.7 34.8 34.8 34.9 35.0 35.1 35.2 35.3 35.3 35.4 35.5 35.6 35.7 35.8 35.8 35.9 36.0 36.1 36.2 36.3 36.3 36.4 36.5 36.6 36.7 36.7 36.8 36.9 37.0 37.1 37.2 37.2 37.3 37.4 37.5 37.6 37.7 37.7 37.8 37.9 38.0 38.1 38.2 38.2 38.3 38.4 38.5 38.6 38.6 38.7 38.8 38.9 39.0 39.1 39.1 39.2 39.3 39.4 39.5 39.6 39.6 39.7 39.8 39.9 40.0 40.0 40.1 40.2 40.3 40.4 40.5 40.5 40.6 40.7 40.8 40.9 41.0 41.0 41.1 41.2 41.3 41.4 41.5 41.5 41.6 41.7 41.8 41.9 41.9 42.0 42.1 42.2 42.3 42.4 42.4 42.5 42.6 42.7 42.8 42.9 42.9 43.0 43.1 43.2 43.3 43.4 43.4 43.5 43.6 43.7 43.8 43.8 43.9 44.0 44.1 44.2 44.3 44.3 44.4 44.5 44.6 44.7 44.8 44.8 44.9 45.0 45.1 45.2 45.3 45.3 45.4 45.5 45.6 45.7 45.7 45.8 45.9 46.0 46.1 46.2 46.2 46.3 46.4 46.5 46.6 46.7 46.7 46.8 46.9 47.0 47.1 47.2 47.2 47.3 47.4 47.5 47.6 47.6 47.7 47.8 47.9 48.0 48.1 48.1 48.2 48.3 48.4 48.5 48.6 48.6 48.7 48.8 48.9 49.0 49.1 49.1 49.2 49.3 49.4 49.5 49.5 49.6 49.7 49.8 49.9 50.0 50.0 50.1 50.2 50.3 50.4 50.5 50.5 50.6 50.7 50.8 50.9 50.9 51.0 51.1 51.2 51.3 51.4 51.4 51.5 51.6 51.7 51.8 51.9 51.9 52.0 52.1 52.2 52.3 52.4 52.4 52.5 52.6 52.7 52.8 52.8 52.9 53.0 53.1 53.2 53.3 53.3 53.4 53.5 53.6 53.7 53.8 53.8 53.9 54.0 54.1 54.2 54.3 54.3 54.4 54.5 54.6 54.7 54.7 54.8 54.9 55.0 55.1 55.2 55.2 55.3 55.4 55.5 55.6 55.7 55.7 55.8 55.9 56.0 56.1 56.2 56.2 56.3 56.4 56.5 56.6 56.6 56.7 56.8 56.9 57.0 57.1 57.1 57.2 57.3 57.4 57.5 57.6 57.6 57.7 57.8 57.9 58.0 58.1 58.1 58.2 58.3 58.4 58.5 58.5 58.6 58.7 58.8 58.9 59.0 59.0 59.1 59.2 59.3 59.4 59.5 59.5 59.6 59.7 59.8 59.9 60.0 60.0 60.1 60.2 60.3 60.4 60.4 60.5 60.6 60.7 60.8 60.9 60.9 61.0 61.1 61.2 61.3 61.4 61.4 61.5 61.6 61.7 61.8 61.8 61.9 62.0 62.1 62.2 62.3 62.3 62.4 62.5 62.6 62.7 62.8 62.8 62.9 63.0 63.1 63.2 63.3 63.3 63.4 63.5 63.6 63.7 63.7 63.8 63.9 64.0 64.1 64.2 64.2 64.3 64.4 64.5 64.6 64.7 64.7 64.8 64.9 65.0 65.1 65.2 65.2 65.3 65.4 65.5 65.6 65.6 65.7 65.8 65.9 66.0 66.1 66.1 66.2 66.3 66.4 66.5 66.6 66.6 66.7 66.8 66.9 67.0 67.1 67.1 67.2 67.3 67.4 67.5 67.5 67.6 67.7 67.8 67.9 68.0 68.0 68.1 68.2 68.3 68.4 68.5 68.5 68.6 68.7 68.8 68.9 69.0 69.0 69.1 69.2 69.3 69.4 69.4 69.5 69.6 69.7 69.8 69.9 69.9 70.0 70.1 70.2 70.3 70.4 70.4 70.5 70.6 70.7 70.8 70.9 70.9 71.0 71.1 71.2 71.3 71.3 71.4 71.5 71.6 71.7 71.8 71.8 71.9 72.0 72.1 72.2 72.3 72.3 72.4 72.5 72.6 72.7 72.7 72.8 72.9 73.0 73.1 73.2 73.2 73.3 73.4 73.5 73.6 73.7 73.7 73.8 73.9 74.0 74.1 74.2 74.2 74.3 74.4 74.5 74.6 74.6 74.7 74.8 74.9 75.0 75.1 75.1 75.2 75.3 75.4 75.5 75.6 75.6 75.7 75.8 75.9 76.0 76.1 76.1 76.2 76.3 76.4 76.5 76.5 76.6 76.7 76.8 76.9 77.0 77.0 77.1 77.2 77.3 77.4 77.5 77.5 77.6 77.7 77.8 77.9 78.0 78.0 78.1 78.2 78.3 78.4 78.4 78.5 78.6 78.7 78.8 78.9 78.9 79.0 79.1 79.2 79.3 79.4 79.4 79.5 79.6 79.7 79.8 79.9 79.9 80.0 80.1 80.2 80.3 80.3 80.4 80.5 80.6 80.7 80.8 80.8 80.9 81.0 81.1 81.2 81.3 81.3 81.4 81.5 81.6 81.7 81.8 81.8 81.9 82.0 82.1 82.2 82.2 82.3 82.4 82.5 82.6 82.7 82.7 82.8 82.9 83.0 83.1 83.2 83.2 83.3 83.4 83.5 83.6 83.6 83.7 83.8 83.9 84.0 84.1 84.1 84.2 84.3 84.4 84.5 84.6 84.6 84.7 84.8 84.9 85.0 85.1 85.1 85.2 85.3 85.4 85.5 85.5 85.6 85.7 85.8 85.9 86.0 86.0 86.1 86.2 86.3 86.4 86.5 86.5 86.6 86.7 86.8 86.9 87.0 87.0 87.1 87.2 87.3 87.4 87.4 87.5 87.6 87.7 87.8 87.9 87.9 88.0 88.1 88.2 88.3 88.4 88.4 88.5 88.6 88.7 88.8 88.9 88.9 89.0 89.1 89.2 89.3 89.3 89.4 89.5 89.6 89.7 89.8 89.8 89.9 90.0 90.1 90.2 90.3 90.3 90.4 90.5 90.6 90.7 90.8 90.8 90.9 91.0 91.1 91.2 91.2 91.3 91.4 91.5 91.6 91.7 91.7 91.8 91.9 92.0 92.1 92.2 92.2 92.3 92.4 92.5 92.6 92.7 92.7 92.8 92.9 93.0 93.1 93.1 93.2 93.3 93.4 93.5 93.6 93.6 93.7 93.8 93.9 94.0 94.1 94.1 94.2 94.3 94.4 94.5 94.5 94.6 94.7 94.8 94.9 95.0 95.0 95.1 95.2 95.3 95.4 95.5 95.5 95.6 95.7 95.8 95.9 96.0 96.0 96.1 96.2 96.3 96.4 96.4 96.5 96.6 96.7 96.8 96.9 96.9 97.0 97.1 97.2 97.3 97.4 97.4 97.5 97.6 97.7 97.8 97.9 97.9 98.0 98.1 98.2 98.3 98.3 98.4 98.5 98.6 98.7 98.8 98.8 98.9 99.0 99.1 99.2 99.3 99.3 99.4 99.5 99.6 99.7 99.8 99.8 99.9 -found 59 predictions from path traversal Error with prediction: snap lend_intergenic: 8855, rend_intergenic: 3181 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28447, rend_intergenic: 10665 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43587, rend_intergenic: 32666 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 48172, rend_intergenic: 43830 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 61559, rend_intergenic: 50325 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65234, rend_intergenic: 62383 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75390, rend_intergenic: 67525 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82348, rend_intergenic: 75507 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 93958, rend_intergenic: 86813 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97008, rend_intergenic: 94251 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 101810, rend_intergenic: 98385 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 109812, rend_intergenic: 102092 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 125058, rend_intergenic: 115573 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153613, rend_intergenic: 126473 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 168220, rend_intergenic: 158914 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 191080, rend_intergenic: 169397 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 192182, rend_intergenic: 191116 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 210073, rend_intergenic: 194979 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 217793, rend_intergenic: 210103 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 219847, rend_intergenic: 219844 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 237317, rend_intergenic: 227681 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 251795, rend_intergenic: 243110 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 254879, rend_intergenic: 252110 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 278247, rend_intergenic: 263347 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 285605, rend_intergenic: 284760 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 288595, rend_intergenic: 285685 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 291467, rend_intergenic: 289743 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 219847, rend_intergenic: 219844 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 20 predictions persist after filtering for low support