-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_8/scaffold_8_4215109-4389516

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_8-snap.861-T1
Valid prediction for snap_scaffold_8-snap.836-T1
Valid prediction for GlimmerHMM_glimmerT_20024-T1
Valid prediction for GeneMark_model.34308_t
Valid prediction for GlimmerHMM_glimmerT_20025-T1
Valid prediction for GlimmerHMM_glimmerT_20040-T1
Valid prediction for GlimmerHMM_glimmerT_20034-T1
Valid prediction for CodingQuarry_transcript_59478-T1
Valid prediction for pasa_asmbl_51819.p1
Valid prediction for GlimmerHMM_glimmerT_20042-T1
Valid prediction for GeneMark_model.34303_t
Valid prediction for GeneMark_model.34295_t
Valid prediction for snap_scaffold_8-snap.857-T1
Valid prediction for snap_scaffold_8-snap.834-T1
Valid prediction for snap_scaffold_8-snap.838-T1
Valid prediction for GeneMark_model.34322_t
Valid prediction for CodingQuarry_transcript_59482-T1
Valid prediction for GeneMark_model.34289_t
Valid prediction for snap_scaffold_8-snap.843-T1
Valid prediction for CodingQuarry_transcript_59483-T1
Valid prediction for pasa_asmbl_51826.p1
Couldn't classify 108956, 109178
Sorry, prediction pasa_asmbl_51820.p1 fails validation.
(ACG)	 AA	108956-109178	GT	AGG
(GGA)	 AG	109990-110025	GT	AGG
(TCT)	 AG	110294-110370	GT	TGG
(CAA)	 AG	110481-110602	GT	AAG
(AGC)	 AG	110855-110955	GT	AGG
(ACA)	 AG	111224-111304	GT	CAG
(CAC)	 AG	111687-111830	GT	CCG
(TGC)	 AG	112507-112579	GT	AGG
(TTT)	 AG	112954-113073	GT	GAG
(GAC)	 AG	114395-114459	GT	CCG
(GTC)	 AG	114617-114675	GA	AGG
-recovered pasa_asmbl_51820.p1, terminal, 109990, 110025
-recovered pasa_asmbl_51820.p1, terminal, 114617, 114675
-recovered pasa_asmbl_51820.p1, internal, 109990, 110025
-recovered pasa_asmbl_51820.p1, internal, 110294, 110370
-recovered pasa_asmbl_51820.p1, internal, 110481, 110602
-recovered pasa_asmbl_51820.p1, internal, 110855, 110955
-recovered pasa_asmbl_51820.p1, internal, 111224, 111304
-recovered pasa_asmbl_51820.p1, internal, 111687, 111830
-recovered pasa_asmbl_51820.p1, internal, 112507, 112579
-recovered pasa_asmbl_51820.p1, internal, 112954, 113073
-recovered pasa_asmbl_51820.p1, internal, 114395, 114459
Valid prediction for GeneMark_model.34293_t
Valid prediction for CodingQuarry_transcript_59485-T1
Valid prediction for HiQ_model.g13388.t1
Valid prediction for GeneMark_model.34306_t
Valid prediction for GeneMark_model.34312_t
Valid prediction for GlimmerHMM_glimmerT_20045-T1
Valid prediction for GeneMark_model.34318_t
Valid prediction for snap_scaffold_8-snap.855-T1
Couldn't classify 76666, 76708
Sorry, prediction pasa_asmbl_51815.p2 fails validation.
(TGT)	 AC	76666-76708	GT	AGG
(AGT)	 AG	77160-77369	GT	AGG
(GTC)	 AG	77629-77787	GT	AGG
(GCA)	 AG	78224-78348	GT	AGG
(AGG)	 AG	78446-78640	GT	AGG
(AGG)	 AG	78876-78966	GT	AGG
(GTG)	 AG	79404-79602	GT	AGG
(ATG)	 AG	79764-79861	GT	AGG
(GGC)	 AG	79970-80100	GT	AGG
(AAA)	 AG	80662-80838	AA	AAA
add_exon() Sorry, pasa_asmbl_51815.p2 79764-79861-initial-1 is invalid.
-recovered pasa_asmbl_51815.p2, initial, 79764, 79861
add_exon() Sorry, pasa_asmbl_51815.p2 79404-79602-terminal-3 is invalid.
-recovered pasa_asmbl_51815.p2, terminal, 79404, 79602
-recovered pasa_asmbl_51815.p2, terminal, 80662, 80838
-recovered pasa_asmbl_51815.p2, internal, 77160, 77369
-recovered pasa_asmbl_51815.p2, internal, 77629, 77787
-recovered pasa_asmbl_51815.p2, internal, 78224, 78348
-recovered pasa_asmbl_51815.p2, internal, 78446, 78640
-recovered pasa_asmbl_51815.p2, internal, 78876, 78966
-recovered pasa_asmbl_51815.p2, internal, 79404, 79602
-recovered pasa_asmbl_51815.p2, internal, 79764, 79861
-recovered pasa_asmbl_51815.p2, internal, 79970, 80100
Valid prediction for HiQ_model.g13383.t1
Valid prediction for HiQ_model.g13394.t1
Couldn't classify 120388, 120582
Sorry, prediction pasa_asmbl_51823.p1 fails validation.
(GGT)	 TA	120388-120582	GT	AGG
(AAT)	 AG	120930-121086	GT	AGG
(GTA)	 AG	123697-123819	GT	AGG
(CAA)	 AG	124191-124265	GT	CAG
(ATG)	 AG	124443-124573	GT	AAG
(AAC)	 AG	124673-124780	GT	TGG
(GCC)	 AG	124895-125038	GT	AGG
(AGG)	 AG	125171-125315	GT	GGG
(TGC)	 AG	126067-126098	GG	AAG
add_exon() Sorry, pasa_asmbl_51823.p1 124443-124573-initial-1 is invalid.
-recovered pasa_asmbl_51823.p1, initial, 124443, 124573
-recovered pasa_asmbl_51823.p1, terminal, 126067, 126098
-recovered pasa_asmbl_51823.p1, internal, 120930, 121086
-recovered pasa_asmbl_51823.p1, internal, 123697, 123819
-recovered pasa_asmbl_51823.p1, internal, 124191, 124265
-recovered pasa_asmbl_51823.p1, internal, 124443, 124573
-recovered pasa_asmbl_51823.p1, internal, 124673, 124780
-recovered pasa_asmbl_51823.p1, internal, 124895, 125038
-recovered pasa_asmbl_51823.p1, internal, 125171, 125315
Valid prediction for HiQ_model.g13390.t1
Valid prediction for snap_scaffold_8-snap.850-T1
Valid prediction for Augustus_model.g13387.t1
Valid prediction for snap_scaffold_8-snap.845-T1
Valid prediction for GlimmerHMM_glimmerT_20037-T1
Valid prediction for snap_scaffold_8-snap.863-T1
Valid prediction for GlimmerHMM_glimmerT_20038-T1
Valid prediction for GeneMark_model.34288_t
Valid prediction for snap_scaffold_8-snap.848-T1
Valid prediction for snap_scaffold_8-snap.864-T1
Valid prediction for GlimmerHMM_glimmerT_20030-T1
Valid prediction for GlimmerHMM_glimmerT_20043-T1
Valid prediction for GeneMark_model.34300_t
Valid prediction for GeneMark_model.34291_t
Valid prediction for GlimmerHMM_glimmerT_20033-T1
Valid prediction for snap_scaffold_8-snap.858-T1
Valid prediction for pasa_asmbl_51811.p1
Valid prediction for GeneMark_model.34297_t
Couldn't classify 97453, 97608
Sorry, prediction pasa_asmbl_51818.p1 fails validation.
(CCT)	 AG	97453-97608	GT	AGG
(ATC)	 AG	97748-98173	GT	AGG
(CGT)	 AG	99279-99353	GT	AGG
(TTC)	 AG	99447-99736	GT	AAG
(GCC)	 AG	99844-100062	GT	AGG
(GGC)	 AG	100190-100400	GT	AGG
(GCG)	 AG	102516-102752	GT	AGG
(GAC)	 AG	102875-103017	GT	CGG
(CTT)	 AG	103291-103423	GT	CTG
(AAC)	 AG	103632-103790	GG	GAG
-recovered pasa_asmbl_51818.p1, terminal, 103632, 103790
-recovered pasa_asmbl_51818.p1, internal, 97453, 97608
-recovered pasa_asmbl_51818.p1, internal, 97748, 98173
-recovered pasa_asmbl_51818.p1, internal, 99279, 99353
-recovered pasa_asmbl_51818.p1, internal, 99447, 99736
-recovered pasa_asmbl_51818.p1, internal, 99844, 100062
-recovered pasa_asmbl_51818.p1, internal, 100190, 100400
-recovered pasa_asmbl_51818.p1, internal, 102516, 102752
-recovered pasa_asmbl_51818.p1, internal, 102875, 103017
-recovered pasa_asmbl_51818.p1, internal, 103291, 103423
Valid prediction for HiQ_model.g13392.t1
Valid prediction for HiQ_model.g13393.t1
Valid prediction for snap_scaffold_8-snap.846-T1
Valid prediction for GeneMark_model.34314_t
Valid prediction for GeneMark_model.34316_t
Valid prediction for snap_scaffold_8-snap.847-T1
Couldn't classify 74463, 74562
Sorry, prediction pasa_asmbl_51814.p2 fails validation.
(ATG)	 AG	73171-73266	GT	GGG
(AAG)	 AG	73364-73454	GT	AGG
(GTG)	 AG	73552-73750	GT	AGG
(GTG)	 AG	74463-74562	GA	GTG
-recovered pasa_asmbl_51814.p2, initial, 73171, 73266
add_exon() Sorry, pasa_asmbl_51814.p2 73552-73750-terminal-3 is invalid.
-recovered pasa_asmbl_51814.p2, terminal, 73552, 73750
-recovered pasa_asmbl_51814.p2, internal, 73171, 73266
-recovered pasa_asmbl_51814.p2, internal, 73364, 73454
-recovered pasa_asmbl_51814.p2, internal, 73552, 73750
Valid prediction for GeneMark_model.34310_t
Valid prediction for snap_scaffold_8-snap.853-T1
Valid prediction for CodingQuarry_transcript_59484-T1
Valid prediction for snap_scaffold_8-snap.840-T1
Valid prediction for GlimmerHMM_glimmerT_20031-T1
Valid prediction for GeneMark_model.34324_t
Valid prediction for GlimmerHMM_glimmerT_20032-T1
Couldn't classify 97289, 97395
Sorry, prediction pasa_asmbl_51817.p1 fails validation.
(ATG)	 AG	94833-94936	GT	AGG
(CTA)	 AG	95102-95246	GT	AGG
(GAG)	 AG	95459-95544	GT	AGG
(GTA)	 AG	95639-95780	GT	AGG
(GCG)	 AG	96028-96070	GT	AGG
(CGG)	 AG	96174-96345	GT	GGG
(AAT)	 AG	96477-96639	GT	AGG
(TGG)	 AG	96827-96968	GT	ACG
(TGA)	 AG	97289-97395	CC	AGC
-recovered pasa_asmbl_51817.p1, initial, 94833, 94936
-recovered pasa_asmbl_51817.p1, internal, 94833, 94936
-recovered pasa_asmbl_51817.p1, internal, 95102, 95246
-recovered pasa_asmbl_51817.p1, internal, 95459, 95544
-recovered pasa_asmbl_51817.p1, internal, 95639, 95780
-recovered pasa_asmbl_51817.p1, internal, 96028, 96070
-recovered pasa_asmbl_51817.p1, internal, 96174, 96345
-recovered pasa_asmbl_51817.p1, internal, 96477, 96639
-recovered pasa_asmbl_51817.p1, internal, 96827, 96968

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 163284, 163340
Sorry, prediction pasa_asmbl_52755.p1 fails validation.
(ATG)	 AG	159861-160034	GT	TGG
(AAG)	 AG	160494-160644	GT	CGG
(GCA)	 AG	161007-161176	GT	AGG
(ATG)	 AG	161733-161907	GT	AGG
(AGC)	 AG	162861-163045	GT	GGG
(GAG)	 AG	163284-163340	AA	ACA
-recovered pasa_asmbl_52755.p1, initial, 159861, 160034
-recovered pasa_asmbl_52755.p1, initial, 161733, 161907
-recovered pasa_asmbl_52755.p1, internal, 159861, 160034
-recovered pasa_asmbl_52755.p1, internal, 160494, 160644
-recovered pasa_asmbl_52755.p1, internal, 161007, 161176
-recovered pasa_asmbl_52755.p1, internal, 161733, 161907
-recovered pasa_asmbl_52755.p1, internal, 162861, 163045
Valid prediction for CodingQuarry_transcript_59481-T1
Valid prediction for snap_scaffold_8-snap.856-T1
Valid prediction for HiQ_model.g13384.t1
Valid prediction for Augustus_model.g13389.t1
Valid prediction for snap_scaffold_8-snap.860-T1
Valid prediction for GeneMark_model.34301_t
Valid prediction for GeneMark_model.34313_t
Valid prediction for GeneMark_model.34305_t
Valid prediction for snap_scaffold_8-snap.844-T1
Valid prediction for GeneMark_model.34319_t
Valid prediction for GlimmerHMM_glimmerT_20044-T1
Valid prediction for GlimmerHMM_glimmerT_20035-T1
Valid prediction for snap_scaffold_8-snap.859-T1
Valid prediction for snap_scaffold_8-snap.865-T1
Valid prediction for GeneMark_model.34323_t
Valid prediction for pasa_asmbl_52758.p1
Valid prediction for snap_scaffold_8-snap.835-T1
Valid prediction for Augustus_model.g13391.t1
Valid prediction for snap_scaffold_8-snap.851-T1
Valid prediction for GlimmerHMM_glimmerT_20023-T1
Couldn't classify 164079, 164183
Couldn't classify 164424, 164624
Sorry, prediction pasa_asmbl_52754.p1 fails validation.
(CAC)	 TT	164079-164183	GT	AGG
(AAG)	 AG	164424-164624	AA	TGA
Valid prediction for GeneMark_model.34290_t
Valid prediction for GeneMark_model.34315_t
Valid prediction for GeneMark_model.34296_t
Valid prediction for GeneMark_model.34325_t
Valid prediction for GeneMark_model.34320_t
Valid prediction for snap_scaffold_8-snap.854-T1
Valid prediction for GlimmerHMM_glimmerT_20036-T1
Valid prediction for snap_scaffold_8-snap.841-T1
Valid prediction for snap_scaffold_8-snap.839-T1
Valid prediction for HiQ_model.g13386.t1
Couldn't classify 164691, 164841
Sorry, prediction pasa_asmbl_52753.p1 fails validation.
(CCT)	 CT	164691-164841	GT	AGG
(GGT)	 AG	165258-165415	GT	AGG
(GTG)	 AG	165548-165697	GG	GAG
-recovered pasa_asmbl_52753.p1, terminal, 165548, 165697
-recovered pasa_asmbl_52753.p1, internal, 165258, 165415
Valid prediction for snap_scaffold_8-snap.837-T1
Valid prediction for Augustus_model.g13382.t1
Valid prediction for pasa_asmbl_52770.p1
Valid prediction for GeneMark_model.34292_t
Valid prediction for CodingQuarry_transcript_59480-T1
Valid prediction for GlimmerHMM_glimmerT_20041-T1
Valid prediction for pasa_asmbl_52759.p1
Valid prediction for pasa_asmbl_52765.p1
Valid prediction for GeneMark_model.34298_t
Valid prediction for GlimmerHMM_glimmerT_20047-T1
Valid prediction for Augustus_model.g13385.t1
Valid prediction for snap_scaffold_8-snap.842-T1
Valid prediction for GeneMark_model.34302_t
Valid prediction for GlimmerHMM_glimmerT_20039-T1
Valid prediction for GeneMark_model.34309_t
Valid prediction for Augustus_model.g13396.t1
Valid prediction for GeneMark_model.34299_t
Couldn't classify 134556, 134561
Couldn't classify 140797, 140924
Sorry, prediction pasa_asmbl_52767.p1 fails validation.
(AAC)	 TC	134556-134561	GT	GGG
(AGA)	 AG	134967-135055	GT	AGG
(GGC)	 AG	135278-135356	GT	AGG
(TAT)	 AG	135874-136014	GT	AGG
(GAG)	 AG	136660-136748	GT	GGG
(AAA)	 AG	136856-136907	GT	GGG
(ACT)	 AG	137003-137045	GT	AGG
(ACA)	 AG	137331-137408	GT	TGG
(GAA)	 AG	137645-137715	GT	AGG
(GTG)	 AG	138403-138567	GT	CGG
(GAT)	 AG	140517-140565	GT	GCG
(AGC)	 AG	140797-140924	AT	CCA
-recovered pasa_asmbl_52767.p1, internal, 134967, 135055
-recovered pasa_asmbl_52767.p1, internal, 135278, 135356
-recovered pasa_asmbl_52767.p1, internal, 135874, 136014
-recovered pasa_asmbl_52767.p1, internal, 136660, 136748
-recovered pasa_asmbl_52767.p1, internal, 136856, 136907
-recovered pasa_asmbl_52767.p1, internal, 137003, 137045
-recovered pasa_asmbl_52767.p1, internal, 137331, 137408
-recovered pasa_asmbl_52767.p1, internal, 137645, 137715
-recovered pasa_asmbl_52767.p1, internal, 138403, 138567
-recovered pasa_asmbl_52767.p1, internal, 140517, 140565
Valid prediction for CodingQuarry_transcript_59479-T1
Valid prediction for GeneMark_model.34307_t
Valid prediction for GlimmerHMM_glimmerT_20048-T1
Valid prediction for Augustus_model.g13395.t1
Valid prediction for Augustus_model.g13397.t1
Valid prediction for snap_scaffold_8-snap.849-T1
Valid prediction for GlimmerHMM_glimmerT_20028-T1
Valid prediction for GeneMark_model.34294_t
Valid prediction for GeneMark_model.34311_t
Valid prediction for snap_scaffold_8-snap.862-T1
Valid prediction for snap_scaffold_8-snap.852-T1
Couldn't classify 22663, 23229
Sorry, prediction pasa_asmbl_52771.p1 fails validation.
(CCA)	 TC	22663-23229	CC	AAC
Valid prediction for GlimmerHMM_glimmerT_20026-T1
Valid prediction for GlimmerHMM_glimmerT_20029-T1
Valid prediction for snap_scaffold_8-snap.866-T1
Valid prediction for GlimmerHMM_glimmerT_20027-T1
Valid prediction for GeneMark_model.34317_t
Couldn't classify 144198, 144542
Sorry, prediction pasa_asmbl_52764.p1 fails validation.
(GTC)	 CT	144198-144542	AA	AAA
Valid prediction for GlimmerHMM_glimmerT_20046-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 8865, rend_intergenic: 6147  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14738, rend_intergenic: 9792  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26514, rend_intergenic: 18556  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48744, rend_intergenic: 44643  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54425, rend_intergenic: 53120  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 121473, rend_intergenic: 118937  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124569, rend_intergenic: 123164  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157910, rend_intergenic: 156695  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164629, rend_intergenic: 158342  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 174408
-exon list size: 588


building trellis

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39.0    
39.2    
39.3    
39.5    
39.7    
39.8    
40.0    
40.2    
40.3    
40.5    
40.7    
40.8    
41.0    
41.2    
41.4    
41.5    
41.7    
41.9    
42.0    
42.2    
42.4    
42.5    
42.7    
42.9    
43.1    
43.2    
43.4    
43.6    
43.7    
43.9    
44.1    
44.2    
44.4    
44.6    
44.7    
44.9    
45.1    
45.3    
45.4    
45.6    
45.8    
45.9    
46.1    
46.3    
46.4    
46.6    
46.8    
46.9    
47.1    
47.3    
47.5    
47.6    
47.8    
48.0    
48.1    
48.3    
48.5    
48.6    
48.8    
49.0    
49.2    
49.3    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.7    
50.8    
51.0    
51.2    
51.4    
51.5    
51.7    
51.9    
52.0    
52.2    
52.4    
52.5    
52.7    
52.9    
53.1    
53.2    
53.4    
53.6    
53.7    
53.9    
54.1    
54.2    
54.4    
54.6    
54.7    
54.9    
55.1    
55.3    
55.4    
55.6    
55.8    
55.9    
56.1    
56.3    
56.4    
56.6    
56.8    
56.9    
57.1    
57.3    
57.5    
57.6    
57.8    
58.0    
58.1    
58.3    
58.5    
58.6    
58.8    
59.0    
59.2    
59.3    
59.5    
59.7    
59.8    
60.0    
60.2    
60.3    
60.5    
60.7    
60.8    
61.0    
61.2    
61.4    
61.5    
61.7    
61.9    
62.0    
62.2    
62.4    
62.5    
62.7    
62.9    
63.1    
63.2    
63.4    
63.6    
63.7    
63.9    
64.1    
64.2    
64.4    
64.6    
64.7    
64.9    
65.1    
65.3    
65.4    
65.6    
65.8    
65.9    
66.1    
66.3    
66.4    
66.6    
66.8    
66.9    
67.1    
67.3    
67.5    
67.6    
67.8    
68.0    
68.1    
68.3    
68.5    
68.6    
68.8    
69.0    
69.2    
69.3    
69.5    
69.7    
69.8    
70.0    
70.2    
70.3    
70.5    
70.7    
70.8    
71.0    
71.2    
71.4    
71.5    
71.7    
71.9    
72.0    
72.2    
72.4    
72.5    
72.7    
72.9    
73.1    
73.2    
73.4    
73.6    
73.7    
73.9    
74.1    
74.2    
74.4    
74.6    
74.7    
74.9    
75.1    
75.3    
75.4    
75.6    
75.8    
75.9    
76.1    
76.3    
76.4    
76.6    
76.8    
76.9    
77.1    
77.3    
77.5    
77.6    
77.8    
78.0    
78.1    
78.3    
78.5    
78.6    
78.8    
79.0    
79.2    
79.3    
79.5    
79.7    
79.8    
80.0    
80.2    
80.3    
80.5    
80.7    
80.8    
81.0    
81.2    
81.4    
81.5    
81.7    
81.9    
82.0    
82.2    
82.4    
82.5    
82.7    
82.9    
83.1    
83.2    
83.4    
83.6    
83.7    
83.9    
84.1    
84.2    
84.4    
84.6    
84.7    
84.9    
85.1    
85.3    
85.4    
85.6    
85.8    
85.9    
86.1    
86.3    
86.4    
86.6    
86.8    
86.9    
87.1    
87.3    
87.5    
87.6    
87.8    
88.0    
88.1    
88.3    
88.5    
88.6    
88.8    
89.0    
89.2    
89.3    
89.5    
89.7    
89.8    
90.0    
90.2    
90.3    
90.5    
90.7    
90.8    
91.0    
91.2    
91.4    
91.5    
91.7    
91.9    
92.0    
92.2    
92.4    
92.5    
92.7    
92.9    
93.1    
93.2    
93.4    
93.6    
93.7    
93.9    
94.1    
94.2    
94.4    
94.6    
94.7    
94.9    
95.1    
95.3    
95.4    
95.6    
95.8    
95.9    
96.1    
96.3    
96.4    
96.6    
96.8    
96.9    
97.1    
97.3    
97.5    
97.6    
97.8    
98.0    
98.1    
98.3    
98.5    
98.6    
98.8    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 21 predictions from path traversal
Error with prediction: snap lend_intergenic: 8865, rend_intergenic: 6147  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14738, rend_intergenic: 9792  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26514, rend_intergenic: 18556  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48744, rend_intergenic: 44643  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54425, rend_intergenic: 53120  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 121473, rend_intergenic: 118937  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124569, rend_intergenic: 123164  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157910, rend_intergenic: 156695  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164629, rend_intergenic: 158342  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 19 predictions persist after filtering for low support