-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_8/scaffold_8_15996207-16162961

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for CodingQuarry_transcript_59768-T1
Valid prediction for GlimmerHMM_glimmerT_21518-T1
Valid prediction for GeneMark_model.36707_t
Valid prediction for GlimmerHMM_glimmerT_21515-T1
Valid prediction for snap_scaffold_8-snap.2938-T1
Valid prediction for snap_scaffold_8-snap.2931-T1
Valid prediction for GeneMark_model.36714_t
Valid prediction for GeneMark_model.36718_t
Valid prediction for Augustus_model.g14400.t1
Couldn't classify 127694, 127758
Sorry, prediction pasa_asmbl_52420.p1 fails validation.
(AGA)	 AG	127694-127758	GT	GAG
(GCA)	 AG	127850-128118	GT	CAG
(GCA)	 AG	128253-128342	GT	AGG
(GGG)	 AG	128455-128540	GT	AGG
(GAC)	 AG	128659-128829	GT	AGG
(TTG)	 AG	128945-129090	GT	AAG
(GGA)	 AG	129248-129401	CA	GAC
add_exon() Sorry, pasa_asmbl_52420.p1 128253-128342-terminal-1 is invalid.
-recovered pasa_asmbl_52420.p1, terminal, 128253, 128342
-recovered pasa_asmbl_52420.p1, terminal, 129248, 129401
-recovered pasa_asmbl_52420.p1, internal, 127694, 127758
-recovered pasa_asmbl_52420.p1, internal, 127850, 128118
-recovered pasa_asmbl_52420.p1, internal, 128253, 128342
-recovered pasa_asmbl_52420.p1, internal, 128455, 128540
-recovered pasa_asmbl_52420.p1, internal, 128659, 128829
-recovered pasa_asmbl_52420.p1, internal, 128945, 129090
Valid prediction for Augustus_model.g14392.t1
Valid prediction for GeneMark_model.36699_t
Valid prediction for GlimmerHMM_glimmerT_21513-T1
Valid prediction for GlimmerHMM_glimmerT_21494-T1
Valid prediction for GlimmerHMM_glimmerT_21512-T1
Valid prediction for GlimmerHMM_glimmerT_21505-T1
Valid prediction for GlimmerHMM_glimmerT_21493-T1
Valid prediction for snap_scaffold_8-snap.2940-T1
Valid prediction for snap_scaffold_8-snap.2930-T1
Valid prediction for HiQ_model.g14395.t1
Valid prediction for GlimmerHMM_glimmerT_21514-T1
Valid prediction for snap_scaffold_8-snap.2942-T1
Valid prediction for GeneMark_model.36702_t
Valid prediction for GeneMark_model.36688_t
Valid prediction for pasa_asmbl_52418.p1
Valid prediction for GlimmerHMM_glimmerT_21496-T1
Valid prediction for HiQ_model.g14394.t1
Valid prediction for GlimmerHMM_glimmerT_21517-T1
Valid prediction for snap_scaffold_8-snap.2943-T1
Valid prediction for GeneMark_model.36711_t
Valid prediction for GlimmerHMM_glimmerT_21511-T1
Valid prediction for snap_scaffold_8-snap.2941-T1
Valid prediction for pasa_asmbl_52422.p1
Valid prediction for CodingQuarry_transcript_59769-T1
Valid prediction for GeneMark_model.36708_t
Valid prediction for snap_scaffold_8-snap.2935-T1
Valid prediction for snap_scaffold_8-snap.2944-T1
Valid prediction for GlimmerHMM_glimmerT_21510-T1
Valid prediction for snap_scaffold_8-snap.2939-T1
Valid prediction for pasa_asmbl_52417.p1
Valid prediction for GeneMark_model.36693_t
Couldn't classify 134469, 134584
Sorry, prediction pasa_asmbl_52421.p1 fails validation.
(ATG)	 AG	132977-133114	GT	AAG
(ATC)	 AG	133311-133538	GT	AGG
(GGA)	 AG	133643-133789	GT	AGG
(TCT)	 AG	134096-134204	GT	AGG
(CCA)	 AG	134469-134584	NC	NNN
-recovered pasa_asmbl_52421.p1, initial, 132977, 133114
-recovered pasa_asmbl_52421.p1, internal, 132977, 133114
-recovered pasa_asmbl_52421.p1, internal, 133311, 133538
-recovered pasa_asmbl_52421.p1, internal, 133643, 133789
-recovered pasa_asmbl_52421.p1, internal, 134096, 134204
Valid prediction for snap_scaffold_8-snap.2949-T1
Valid prediction for GlimmerHMM_glimmerT_21509-T1
Valid prediction for GeneMark_model.36690_t
Valid prediction for Augustus_model.g14397.t1
Valid prediction for GeneMark_model.36720_t
Valid prediction for Augustus_model.g14398.t1
Valid prediction for snap_scaffold_8-snap.2920-T1
Valid prediction for GeneMark_model.36686_t
Valid prediction for GeneMark_model.36712_t
Valid prediction for snap_scaffold_8-snap.2922-T1
Valid prediction for Augustus_model.g14396.t1
Valid prediction for snap_scaffold_8-snap.2948-T1
Valid prediction for snap_scaffold_8-snap.2932-T1
Valid prediction for snap_scaffold_8-snap.2946-T1
Valid prediction for GlimmerHMM_glimmerT_21500-T1
Valid prediction for GeneMark_model.36692_t
Valid prediction for GeneMark_model.36713_t
Valid prediction for GeneMark_model.36704_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_8-snap.2936-T1
Valid prediction for GlimmerHMM_glimmerT_21520-T1
Valid prediction for snap_scaffold_8-snap.2937-T1
Valid prediction for snap_scaffold_8-snap.2927-T1
Valid prediction for CodingQuarry_transcript_59767-T1
Valid prediction for GeneMark_model.36719_t
Valid prediction for GeneMark_model.36695_t
Valid prediction for GeneMark_model.36697_t
Couldn't classify 150696, 150797
Couldn't classify 157528, 157674
Sorry, prediction pasa_asmbl_53352.p1 fails validation.
(GTG)	 AT	150696-150797	GT	AGG
(CTG)	 AG	151237-151452	GT	AGG
(CTG)	 AG	152059-152158	GT	AGG
(ATG)	 AG	152406-152450	GT	AGG
(CCC)	 AG	153011-153195	GT	AGG
(CTA)	 AG	154031-154140	GT	AGG
(TGA)	 AG	154621-154690	GT	TGG
(CCC)	 AG	155989-156066	GT	AGG
(ATC)	 AG	157228-157368	GT	AGG
(GTC)	 AG	157528-157674	AG	TGA
-recovered pasa_asmbl_53352.p1, initial, 152406, 152450
-recovered pasa_asmbl_53352.p1, internal, 151237, 151452
-recovered pasa_asmbl_53352.p1, internal, 152059, 152158
-recovered pasa_asmbl_53352.p1, internal, 152406, 152450
-recovered pasa_asmbl_53352.p1, internal, 153011, 153195
-recovered pasa_asmbl_53352.p1, internal, 154031, 154140
-recovered pasa_asmbl_53352.p1, internal, 154621, 154690
-recovered pasa_asmbl_53352.p1, internal, 155989, 156066
-recovered pasa_asmbl_53352.p1, internal, 157228, 157368
Couldn't classify 142780, 144083
Couldn't classify 146721, 146865
Sorry, prediction pasa_asmbl_53353.p1 fails validation.
(AGG)	 GC	142780-144083	GT	AGG
(GGA)	 AG	146721-146865	GG	TGG
Valid prediction for GeneMark_model.36715_t
Valid prediction for GlimmerHMM_glimmerT_21502-T1
Valid prediction for Augustus_model.g14387.t1
Valid prediction for HiQ_model.g14389.t1
Valid prediction for Augustus_model.g14384.t1
Valid prediction for snap_scaffold_8-snap.2945-T1
Valid prediction for GlimmerHMM_glimmerT_21497-T1
Valid prediction for snap_scaffold_8-snap.2926-T1
Couldn't classify 78501, 78656
Sorry, prediction pasa_asmbl_53630.p1 fails validation.
(ATG)	 GC	76938-77112	GT	ATG
(GTG)	 AG	78230-78339	GT	TGG
(CTG)	 AG	78501-78656	AT	CCA
-recovered pasa_asmbl_53630.p1, initial, 76938, 77112
-recovered pasa_asmbl_53630.p1, internal, 78230, 78339
Valid prediction for CodingQuarry_transcript_59766-T1
Couldn't classify 85052, 85267
Sorry, prediction HiQ_model.g14390.t1 fails validation.
(CTG)	 AG	85052-85267	GT	AGG
(GCC)	 AG	85398-85632	GT	TGG
(AGA)	 AG	86649-86799	GT	AAG
(GTG)	 AG	87103-87196	GT	AGG
(AAG)	 AG	88292-88423	GT	AGG
(ACC)	 AG	88560-88712	GT	AGG
(GGG)	 AG	88822-88909	GT	TGG
(GTC)	 AG	89107-89191	GT	AGG
(GCA)	 AG	90618-90746	GT	AAG
(GAA)	 AG	91311-91432	GT	CAG
(TGA)	 AG	91641-91786	GT	AAG
(TGC)	 AG	91894-92012	GT	AAG
(ATT)	 AG	92254-92435	GT	AAG
(AGT)	 AG	92909-92991	GT	AGG
(AGG)	 AG	93144-93267	GT	AGG
(AAA)	 AG	93372-93540	GT	AGG
(GGA)	 AG	94125-94308	GC	AGG
add_exon() Sorry, HiQ_model.g14390.t1 93144-93267-terminal-3 is invalid.
-recovered HiQ_model.g14390.t1, terminal, 93144, 93267
-recovered HiQ_model.g14390.t1, terminal, 94125, 94308
-recovered HiQ_model.g14390.t1, internal, 85052, 85267
-recovered HiQ_model.g14390.t1, internal, 85398, 85632
-recovered HiQ_model.g14390.t1, internal, 86649, 86799
-recovered HiQ_model.g14390.t1, internal, 87103, 87196
-recovered HiQ_model.g14390.t1, internal, 88292, 88423
-recovered HiQ_model.g14390.t1, internal, 88560, 88712
-recovered HiQ_model.g14390.t1, internal, 88822, 88909
-recovered HiQ_model.g14390.t1, internal, 89107, 89191
-recovered HiQ_model.g14390.t1, internal, 90618, 90746
-recovered HiQ_model.g14390.t1, internal, 91311, 91432
-recovered HiQ_model.g14390.t1, internal, 91641, 91786
-recovered HiQ_model.g14390.t1, internal, 91894, 92012
-recovered HiQ_model.g14390.t1, internal, 92254, 92435
-recovered HiQ_model.g14390.t1, internal, 92909, 92991
-recovered HiQ_model.g14390.t1, internal, 93144, 93267
-recovered HiQ_model.g14390.t1, internal, 93372, 93540
-recovered HiQ_model.g14390.t1, internal, 94125, 94308
Valid prediction for GlimmerHMM_glimmerT_21498-T1
Valid prediction for GeneMark_model.36721_t
Valid prediction for GeneMark_model.36698_t
Valid prediction for pasa_asmbl_53372.p1
Valid prediction for snap_scaffold_8-snap.2933-T1
Valid prediction for GlimmerHMM_glimmerT_21506-T1
Couldn't classify 98572, 98587
Sorry, prediction pasa_asmbl_53361.p1 fails validation.
(ATG)	 AC	97571-97698	GT	GGG
(GCT)	 AG	97935-98149	GT	AAG
(ACT)	 AG	98304-98454	GT	AGG
(ACA)	 AG	98572-98587	GG	GTG
-recovered pasa_asmbl_53361.p1, initial, 97571, 97698
-recovered pasa_asmbl_53361.p1, internal, 97935, 98149
-recovered pasa_asmbl_53361.p1, internal, 98304, 98454
Valid prediction for Augustus_model.g14391.t1
Valid prediction for GlimmerHMM_glimmerT_21501-T1
Valid prediction for Augustus_model.g14399.t1
Valid prediction for GeneMark_model.36706_t
Couldn't classify 1009, 1179
Couldn't classify 5745, 5831
Sorry, prediction pasa_asmbl_53374.p1 fails validation.
(AAA)	 AG	1009-1179	GT	AGG
(GAG)	 AG	1334-1602	GC	AGG
(TAT)	 AG	2937-3109	GT	AGG
(GCA)	 AG	3428-3501	GT	AGG
(CCT)	 AG	5745-5831	GA	AGG
-recovered pasa_asmbl_53374.p1, internal, 1009, 1179
-recovered pasa_asmbl_53374.p1, internal, 1334, 1602
-recovered pasa_asmbl_53374.p1, internal, 2937, 3109
-recovered pasa_asmbl_53374.p1, internal, 3428, 3501
Valid prediction for GeneMark_model.36691_t
Valid prediction for GeneMark_model.36689_t
Valid prediction for GlimmerHMM_glimmerT_21516-T1
Valid prediction for snap_scaffold_8-snap.2934-T1
Valid prediction for GlimmerHMM_glimmerT_21507-T1
Valid prediction for GlimmerHMM_glimmerT_21504-T1
Valid prediction for GeneMark_model.36700_t
Valid prediction for GeneMark_model.36705_t
Valid prediction for GeneMark_model.36709_t
Valid prediction for HiQ_model.g14386.t1
Valid prediction for GeneMark_model.36696_t
Valid prediction for CodingQuarry_transcript_59765-T1
Couldn't classify 79068, 79173
Couldn't classify 83212, 83487
Sorry, prediction pasa_asmbl_53364.p1 fails validation.
(TTC)	 TC	79068-79173	GT	GCG
(ACT)	 AG	81812-81999	GT	AGG
(GCC)	 AG	83212-83487	TG	CTT
-recovered pasa_asmbl_53364.p1, internal, 81812, 81999
Valid prediction for snap_scaffold_8-snap.2924-T1
Valid prediction for GlimmerHMM_glimmerT_21508-T1
Valid prediction for GeneMark_model.36710_t
Valid prediction for GlimmerHMM_glimmerT_21499-T1
Valid prediction for snap_scaffold_8-snap.2923-T1
Valid prediction for Augustus_model.g14385.t1
Valid prediction for snap_scaffold_8-snap.2921-T1
Couldn't classify 5925, 5940
Couldn't classify 9695, 9894
Sorry, prediction pasa_asmbl_53373.p1 fails validation.
(CCC)	 CC	5925-5940	GT	AGG
(TAG)	 AG	6383-6510	GT	AGG
(CTG)	 AG	8503-8678	GT	AGG
(GAC)	 AG	9289-9422	GT	AGG
(TGT)	 AG	9695-9894	AG	GCA
-recovered pasa_asmbl_53373.p1, internal, 6383, 6510
-recovered pasa_asmbl_53373.p1, internal, 8503, 8678
-recovered pasa_asmbl_53373.p1, internal, 9289, 9422
Valid prediction for GeneMark_model.36694_t
Valid prediction for pasa_asmbl_53366.p1
Valid prediction for snap_scaffold_8-snap.2947-T1
Valid prediction for GeneMark_model.36687_t
Valid prediction for GeneMark_model.36717_t
Valid prediction for Augustus_model.g14388.t1
Valid prediction for pasa_asmbl_53358.p1
Valid prediction for GlimmerHMM_glimmerT_21495-T1
Valid prediction for GeneMark_model.36716_t
Valid prediction for GeneMark_model.36701_t
Valid prediction for snap_scaffold_8-snap.2929-T1
Valid prediction for GlimmerHMM_glimmerT_21492-T1
Valid prediction for snap_scaffold_8-snap.2928-T1
Valid prediction for GeneMark_model.36703_t
Valid prediction for snap_scaffold_8-snap.2925-T1
Valid prediction for GlimmerHMM_glimmerT_21519-T1
Valid prediction for HiQ_model.g14393.t1
Couldn't classify 85025, 85267
Sorry, prediction pasa_asmbl_53362.p1 fails validation.
(GTG)	 GT	85025-85267	GT	AGG
(GCC)	 AG	85398-85632	GT	TGG
(AGA)	 AG	86649-86799	GT	AAG
(GTG)	 AG	87103-87196	GT	AGG
(AAG)	 AG	88292-88423	GT	AGG
(ACC)	 AG	88560-88712	GT	AGG
(GGG)	 AG	88822-88909	GT	TGG
(GTC)	 AG	89107-89191	GT	AGG
(GCA)	 AG	90618-90746	GT	AAG
(GAA)	 AG	91311-91432	GT	CAG
(TGA)	 AG	91641-91786	GT	AAG
(TGC)	 AG	91894-92012	GT	AAG
(ATT)	 AG	92254-92435	GT	AAG
(AGT)	 AG	92909-92991	GT	AGG
(AGG)	 AG	93144-93267	GT	AGG
(AAA)	 AG	93372-93540	GT	AGG
(GGA)	 AG	94125-94308	GC	AGG
add_exon() Sorry, pasa_asmbl_53362.p1 93144-93267-terminal-3 is invalid.
-recovered pasa_asmbl_53362.p1, terminal, 93144, 93267
-recovered pasa_asmbl_53362.p1, terminal, 94125, 94308
-recovered pasa_asmbl_53362.p1, internal, 85398, 85632
-recovered pasa_asmbl_53362.p1, internal, 86649, 86799
-recovered pasa_asmbl_53362.p1, internal, 87103, 87196
-recovered pasa_asmbl_53362.p1, internal, 88292, 88423
-recovered pasa_asmbl_53362.p1, internal, 88560, 88712
-recovered pasa_asmbl_53362.p1, internal, 88822, 88909
-recovered pasa_asmbl_53362.p1, internal, 89107, 89191
-recovered pasa_asmbl_53362.p1, internal, 90618, 90746
-recovered pasa_asmbl_53362.p1, internal, 91311, 91432
-recovered pasa_asmbl_53362.p1, internal, 91641, 91786
-recovered pasa_asmbl_53362.p1, internal, 91894, 92012
-recovered pasa_asmbl_53362.p1, internal, 92254, 92435
-recovered pasa_asmbl_53362.p1, internal, 92909, 92991
-recovered pasa_asmbl_53362.p1, internal, 93144, 93267
-recovered pasa_asmbl_53362.p1, internal, 93372, 93540
-recovered pasa_asmbl_53362.p1, internal, 94125, 94308
Valid prediction for GlimmerHMM_glimmerT_21503-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 18831, rend_intergenic: 9101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82175, rend_intergenic: 76021  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88285, rend_intergenic: 85547  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146425, rend_intergenic: 144358  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148107, rend_intergenic: 147028  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151626, rend_intergenic: 148213  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164889, rend_intergenic: 155494  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 166755
-exon list size: 584


building trellis

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46.1    
46.2    
46.4    
46.6    
46.8    
46.9    
47.1    
47.3    
47.4    
47.6    
47.8    
48.0    
48.1    
48.3    
48.5    
48.6    
48.8    
49.0    
49.1    
49.3    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.7    
50.9    
51.0    
51.2    
51.4    
51.5    
51.7    
51.9    
52.0    
52.2    
52.4    
52.6    
52.7    
52.9    
53.1    
53.2    
53.4    
53.6    
53.8    
53.9    
54.1    
54.3    
54.4    
54.6    
54.8    
54.9    
55.1    
55.3    
55.5    
55.6    
55.8    
56.0    
56.1    
56.3    
56.5    
56.7    
56.8    
57.0    
57.2    
57.3    
57.5    
57.7    
57.8    
58.0    
58.2    
58.4    
58.5    
58.7    
58.9    
59.0    
59.2    
59.4    
59.6    
59.7    
59.9    
60.1    
60.2    
60.4    
60.6    
60.8    
60.9    
61.1    
61.3    
61.4    
61.6    
61.8    
61.9    
62.1    
62.3    
62.5    
62.6    
62.8    
63.0    
63.1    
63.3    
63.5    
63.7    
63.8    
64.0    
64.2    
64.3    
64.5    
64.7    
64.8    
65.0    
65.2    
65.4    
65.5    
65.7    
65.9    
66.0    
66.2    
66.4    
66.6    
66.7    
66.9    
67.1    
67.2    
67.4    
67.6    
67.7    
67.9    
68.1    
68.3    
68.4    
68.6    
68.8    
68.9    
69.1    
69.3    
69.5    
69.6    
69.8    
70.0    
70.1    
70.3    
70.5    
70.6    
70.8    
71.0    
71.2    
71.3    
71.5    
71.7    
71.8    
72.0    
72.2    
72.4    
72.5    
72.7    
72.9    
73.0    
73.2    
73.4    
73.5    
73.7    
73.9    
74.1    
74.2    
74.4    
74.6    
74.7    
74.9    
75.1    
75.3    
75.4    
75.6    
75.8    
75.9    
76.1    
76.3    
76.5    
76.6    
76.8    
77.0    
77.1    
77.3    
77.5    
77.6    
77.8    
78.0    
78.2    
78.3    
78.5    
78.7    
78.8    
79.0    
79.2    
79.4    
79.5    
79.7    
79.9    
80.0    
80.2    
80.4    
80.5    
80.7    
80.9    
81.1    
81.2    
81.4    
81.6    
81.7    
81.9    
82.1    
82.3    
82.4    
82.6    
82.8    
82.9    
83.1    
83.3    
83.4    
83.6    
83.8    
84.0    
84.1    
84.3    
84.5    
84.6    
84.8    
85.0    
85.2    
85.3    
85.5    
85.7    
85.8    
86.0    
86.2    
86.3    
86.5    
86.7    
86.9    
87.0    
87.2    
87.4    
87.5    
87.7    
87.9    
88.1    
88.2    
88.4    
88.6    
88.7    
88.9    
89.1    
89.2    
89.4    
89.6    
89.8    
89.9    
90.1    
90.3    
90.4    
90.6    
90.8    
91.0    
91.1    
91.3    
91.5    
91.6    
91.8    
92.0    
92.2    
92.3    
92.5    
92.7    
92.8    
93.0    
93.2    
93.3    
93.5    
93.7    
93.9    
94.0    
94.2    
94.4    
94.5    
94.7    
94.9    
95.1    
95.2    
95.4    
95.6    
95.7    
95.9    
96.1    
96.2    
96.4    
96.6    
96.8    
96.9    
97.1    
97.3    
97.4    
97.6    
97.8    
98.0    
98.1    
98.3    
98.5    
98.6    
98.8    
99.0    
99.1    
99.3    
99.5    
99.7    
99.8    
-found 20 predictions from path traversal
Error with prediction: snap lend_intergenic: 18831, rend_intergenic: 9101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82175, rend_intergenic: 76021  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88285, rend_intergenic: 85547  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146425, rend_intergenic: 144358  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148107, rend_intergenic: 147028  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151626, rend_intergenic: 148213  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164889, rend_intergenic: 155494  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 19 predictions persist after filtering for low support