-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_8/scaffold_8_14465131-14715301

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_8-snap.2685-T1
Valid prediction for GeneMark_model.36356_t
Valid prediction for snap_scaffold_8-snap.2660-T1
Valid prediction for snap_scaffold_8-snap.2693-T1
Valid prediction for GeneMark_model.36371_t
Valid prediction for snap_scaffold_8-snap.2672-T1
Valid prediction for GeneMark_model.36364_t
Valid prediction for GeneMark_model.36396_t
Couldn't classify 87290, 87347
Couldn't classify 88626, 88720
Sorry, prediction pasa_asmbl_52594.p1 fails validation.
(CTT)	 AG	87290-87347	GT	TGG
(GTG)	 AG	87467-87544	GT	GGG
(GCC)	 AG	88287-88445	GT	AGG
(TCG)	 AG	88626-88720	GT	AGG
add_exon() Sorry, pasa_asmbl_52594.p1 88287-88445-terminal-1 is invalid.
-recovered pasa_asmbl_52594.p1, terminal, 88287, 88445
-recovered pasa_asmbl_52594.p1, internal, 87290, 87347
-recovered pasa_asmbl_52594.p1, internal, 87467, 87544
-recovered pasa_asmbl_52594.p1, internal, 88287, 88445
-recovered pasa_asmbl_52594.p1, internal, 88626, 88720
Valid prediction for snap_scaffold_8-snap.2687-T1
Valid prediction for GlimmerHMM_glimmerT_21326-T1
Valid prediction for snap_scaffold_8-snap.2663-T1
Valid prediction for GlimmerHMM_glimmerT_21315-T1
Valid prediction for snap_scaffold_8-snap.2658-T1
Valid prediction for GeneMark_model.36385_t
Valid prediction for snap_scaffold_8-snap.2683-T1
Valid prediction for GeneMark_model.36374_t
Valid prediction for GeneMark_model.36382_t
Valid prediction for GeneMark_model.36400_t
Valid prediction for GeneMark_model.36376_t
Valid prediction for GeneMark_model.36403_t
Couldn't classify 65254, 65323
Couldn't classify 71831, 71933
Sorry, prediction pasa_asmbl_52366.p1 fails validation.
(GTA)	 TA	65254-65323	GT	AGG
(GCT)	 AG	66999-67085	GT	TGG
(TGA)	 AG	69828-69966	GT	AGG
(GCG)	 AG	71831-71933	AG	TGA
-recovered pasa_asmbl_52366.p1, internal, 66999, 67085
-recovered pasa_asmbl_52366.p1, internal, 69828, 69966
Valid prediction for snap_scaffold_8-snap.2659-T1
Couldn't classify 100334, 100417
Sorry, prediction pasa_asmbl_52369.p1 fails validation.
(GCG)	 AG	100334-100417	GT	AGG
(ATC)	 AG	101306-101410	GT	AGG
(AAT)	 AG	101631-101713	GT	AAG
(AGG)	 AG	102271-102361	GT	AGG
(ACG)	 AG	103491-103549	GT	GAG
(GAT)	 AG	103778-103940	GT	ACG
(GAG)	 AG	104051-104132	GT	TGG
(AAA)	 AG	104300-104357	GT	TGG
(GAT)	 AG	104577-104667	GT	AGG
(GTG)	 AG	107206-107411	GT	GGG
(TTG)	 AG	107639-107773	GT	AGG
(GTG)	 AG	107985-108114	GT	AGG
(CAA)	 AG	108360-108467	GT	AGG
(CTT)	 AG	108585-108725	GT	AGG
(GCT)	 AG	109123-109260	AC	AAA
-recovered pasa_asmbl_52369.p1, terminal, 103491, 103549
-recovered pasa_asmbl_52369.p1, terminal, 109123, 109260
-recovered pasa_asmbl_52369.p1, internal, 100334, 100417
-recovered pasa_asmbl_52369.p1, internal, 101306, 101410
-recovered pasa_asmbl_52369.p1, internal, 101631, 101713
-recovered pasa_asmbl_52369.p1, internal, 102271, 102361
-recovered pasa_asmbl_52369.p1, internal, 103491, 103549
-recovered pasa_asmbl_52369.p1, internal, 103778, 103940
-recovered pasa_asmbl_52369.p1, internal, 104051, 104132
-recovered pasa_asmbl_52369.p1, internal, 104300, 104357
-recovered pasa_asmbl_52369.p1, internal, 104577, 104667
-recovered pasa_asmbl_52369.p1, internal, 107206, 107411
-recovered pasa_asmbl_52369.p1, internal, 107639, 107773
-recovered pasa_asmbl_52369.p1, internal, 107985, 108114
-recovered pasa_asmbl_52369.p1, internal, 108360, 108467
-recovered pasa_asmbl_52369.p1, internal, 108585, 108725
Valid prediction for GeneMark_model.36406_t
Valid prediction for snap_scaffold_8-snap.2675-T1
Valid prediction for GlimmerHMM_glimmerT_21331-T1
Valid prediction for snap_scaffold_8-snap.2680-T1
Valid prediction for Augustus_model.g14278.t1
Valid prediction for GlimmerHMM_glimmerT_21304-T1
Valid prediction for GeneMark_model.36388_t
Valid prediction for snap_scaffold_8-snap.2689-T1
Valid prediction for GlimmerHMM_glimmerT_21318-T1
Valid prediction for GeneMark_model.36365_t
Valid prediction for GeneMark_model.36394_t
Valid prediction for snap_scaffold_8-snap.2649-T1
Valid prediction for Augustus_model.g14284.t1
Valid prediction for GlimmerHMM_glimmerT_21319-T1
Valid prediction for snap_scaffold_8-snap.2670-T1
Valid prediction for GeneMark_model.36366_t
Valid prediction for Augustus_model.g14287.t1
Valid prediction for snap_scaffold_8-snap.2681-T1
Valid prediction for GlimmerHMM_glimmerT_21310-T1
Valid prediction for GlimmerHMM_glimmerT_21317-T1
Valid prediction for GlimmerHMM_glimmerT_21324-T1
Valid prediction for GeneMark_model.36386_t
Valid prediction for GeneMark_model.36410_t
Valid prediction for GlimmerHMM_glimmerT_21316-T1
Valid prediction for GeneMark_model.36391_t
Valid prediction for GeneMark_model.36368_t
Valid prediction for snap_scaffold_8-snap.2656-T1
Valid prediction for GeneMark_model.36392_t
Valid prediction for GlimmerHMM_glimmerT_21312-T1
Valid prediction for GeneMark_model.36380_t
Valid prediction for Augustus_model.g14281.t1
Valid prediction for snap_scaffold_8-snap.2694-T1
Valid prediction for snap_scaffold_8-snap.2665-T1
Valid prediction for GlimmerHMM_glimmerT_21320-T1
Valid prediction for snap_scaffold_8-snap.2662-T1
Valid prediction for snap_scaffold_8-snap.2664-T1
Valid prediction for snap_scaffold_8-snap.2701-T1
Valid prediction for GeneMark_model.36361_t
Valid prediction for GeneMark_model.36390_t
Valid prediction for GeneMark_model.36413_t
Valid prediction for snap_scaffold_8-snap.2697-T1
Valid prediction for snap_scaffold_8-snap.2678-T1
Couldn't classify 96246, 96304
Sorry, prediction pasa_asmbl_52643.p1 fails validation.
(CAG)	 TC	96246-96304	GT	AGG
(ACT)	 AG	96933-97203	CA	AAC
-recovered pasa_asmbl_52643.p1, terminal, 96933, 97203
Valid prediction for snap_scaffold_8-snap.2648-T1
Valid prediction for snap_scaffold_8-snap.2679-T1
Valid prediction for GeneMark_model.36378_t
Valid prediction for GlimmerHMM_glimmerT_21323-T1
Valid prediction for snap_scaffold_8-snap.2699-T1
Valid prediction for GlimmerHMM_glimmerT_21327-T1
Valid prediction for GeneMark_model.36369_t
Valid prediction for GeneMark_model.36408_t
Valid prediction for GeneMark_model.36405_t
Valid prediction for GlimmerHMM_glimmerT_21322-T1
Valid prediction for snap_scaffold_8-snap.2692-T1
Valid prediction for snap_scaffold_8-snap.2653-T1
Valid prediction for Augustus_model.g14283.t1
Valid prediction for GlimmerHMM_glimmerT_21321-T1
Valid prediction for GeneMark_model.36358_t
Valid prediction for GlimmerHMM_glimmerT_21329-T1
Valid prediction for GeneMark_model.36359_t
Valid prediction for Augustus_model.g14285.t1
Valid prediction for Augustus_model.g14286.t1
Valid prediction for snap_scaffold_8-snap.2651-T1
Valid prediction for snap_scaffold_8-snap.2698-T1
Couldn't classify 75101, 75208
Couldn't classify 83741, 83938
Sorry, prediction pasa_asmbl_52368.p1 fails validation.
(GTG)	 AG	75101-75208	GT	AGG
(ATT)	 AG	75517-75597	GT	AGG
(GTG)	 AG	78007-78122	GT	AGG
(TTC)	 AG	80417-80480	GT	AGG
(GGC)	 AG	83100-83195	GT	ACG
(AAC)	 AG	83741-83938	GT	AGG
-recovered pasa_asmbl_52368.p1, internal, 75101, 75208
-recovered pasa_asmbl_52368.p1, internal, 75517, 75597
-recovered pasa_asmbl_52368.p1, internal, 78007, 78122
-recovered pasa_asmbl_52368.p1, internal, 80417, 80480
-recovered pasa_asmbl_52368.p1, internal, 83100, 83195
-recovered pasa_asmbl_52368.p1, internal, 83741, 83938

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.36384_t
Valid prediction for GlimmerHMM_glimmerT_21325-T1
Valid prediction for GlimmerHMM_glimmerT_21328-T1
Valid prediction for snap_scaffold_8-snap.2650-T1
Valid prediction for snap_scaffold_8-snap.2677-T1
Valid prediction for GlimmerHMM_glimmerT_21307-T1
Valid prediction for Augustus_model.g14288.t1
Valid prediction for snap_scaffold_8-snap.2671-T1
Valid prediction for GlimmerHMM_glimmerT_21313-T1
Valid prediction for GeneMark_model.36372_t
Valid prediction for GeneMark_model.36407_t
Valid prediction for snap_scaffold_8-snap.2668-T1
Valid prediction for snap_scaffold_8-snap.2669-T1
Valid prediction for GeneMark_model.36360_t
Valid prediction for snap_scaffold_8-snap.2696-T1
Valid prediction for snap_scaffold_8-snap.2655-T1
Valid prediction for snap_scaffold_8-snap.2674-T1
Valid prediction for GeneMark_model.36397_t
Valid prediction for GlimmerHMM_glimmerT_21332-T1
Valid prediction for GlimmerHMM_glimmerT_21330-T1
Valid prediction for GeneMark_model.36362_t
Valid prediction for GeneMark_model.36387_t
Valid prediction for GeneMark_model.36399_t
Valid prediction for snap_scaffold_8-snap.2667-T1
Valid prediction for GlimmerHMM_glimmerT_21305-T1
Valid prediction for GeneMark_model.36398_t
Valid prediction for GeneMark_model.36393_t
Valid prediction for GeneMark_model.36389_t
Valid prediction for snap_scaffold_8-snap.2661-T1
Valid prediction for snap_scaffold_8-snap.2657-T1
Valid prediction for snap_scaffold_8-snap.2695-T1
Valid prediction for snap_scaffold_8-snap.2691-T1
Valid prediction for snap_scaffold_8-snap.2652-T1
Valid prediction for GlimmerHMM_glimmerT_21308-T1
Valid prediction for GeneMark_model.36409_t
Valid prediction for Augustus_model.g14279.t1
Valid prediction for GeneMark_model.36375_t
Valid prediction for GeneMark_model.36367_t
Valid prediction for snap_scaffold_8-snap.2676-T1
Valid prediction for snap_scaffold_8-snap.2666-T1
Valid prediction for GeneMark_model.36370_t
Valid prediction for GlimmerHMM_glimmerT_21311-T1
Valid prediction for snap_scaffold_8-snap.2654-T1
Valid prediction for snap_scaffold_8-snap.2700-T1
Valid prediction for GeneMark_model.36363_t
Valid prediction for GeneMark_model.36411_t
Valid prediction for GlimmerHMM_glimmerT_21314-T1
Valid prediction for GeneMark_model.36401_t
Valid prediction for GeneMark_model.36357_t
Valid prediction for GeneMark_model.36377_t
Valid prediction for GeneMark_model.36402_t
Valid prediction for snap_scaffold_8-snap.2673-T1
Valid prediction for GlimmerHMM_glimmerT_21309-T1
Valid prediction for GeneMark_model.36404_t
Valid prediction for GeneMark_model.36381_t
Valid prediction for GeneMark_model.36373_t
Valid prediction for snap_scaffold_8-snap.2682-T1
Valid prediction for snap_scaffold_8-snap.2690-T1
Valid prediction for snap_scaffold_8-snap.2684-T1
Valid prediction for GeneMark_model.36412_t
Valid prediction for GeneMark_model.36355_t
Valid prediction for snap_scaffold_8-snap.2688-T1
Valid prediction for GeneMark_model.36383_t
Valid prediction for GlimmerHMM_glimmerT_21306-T1
Valid prediction for snap_scaffold_8-snap.2686-T1
Valid prediction for Augustus_model.g14277.t1
Valid prediction for GeneMark_model.36379_t
Valid prediction for GeneMark_model.36395_t
Valid prediction for HiQ_model.g14280.t1
Valid prediction for Augustus_model.g14282.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 18582, rend_intergenic: 15465  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21409, rend_intergenic: 19628  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28715, rend_intergenic: 22245  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29832, rend_intergenic: 28937  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37184, rend_intergenic: 37101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40381, rend_intergenic: 37295  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59583, rend_intergenic: 40440  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102385, rend_intergenic: 81802  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109260, rend_intergenic: 107283  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111946, rend_intergenic: 111279  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114442, rend_intergenic: 113508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136799, rend_intergenic: 134726  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146082, rend_intergenic: 143089  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147476, rend_intergenic: 147118  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 152267, rend_intergenic: 147792  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153860, rend_intergenic: 153767  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158360, rend_intergenic: 154052  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164014, rend_intergenic: 161756  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170065, rend_intergenic: 164805  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177652, rend_intergenic: 170160  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191140, rend_intergenic: 186029  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 250171
-exon list size: 847


building trellis

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50.5    
50.6    
50.8    
50.9    
51.0    
51.1    
51.2    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.1    
52.2    
52.3    
52.4    
52.5    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.1    
54.2    
54.3    
54.4    
54.5    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.1    
56.2    
56.3    
56.4    
56.5    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.4    
57.5    
57.6    
57.7    
57.8    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.4    
59.5    
59.6    
59.7    
59.8    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.4    
61.5    
61.6    
61.7    
61.8    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.7    
62.8    
62.9    
63.0    
63.1    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.7    
64.8    
64.9    
65.0    
65.1    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.7    
66.8    
66.9    
67.0    
67.1    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
68.0    
68.1    
68.2    
68.3    
68.4    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
70.0    
70.1    
70.2    
70.3    
70.4    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
72.0    
72.1    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.6    
73.7    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.3    
75.4    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.3    
77.4    
77.5    
77.6    
77.7    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.6    
78.7    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.6    
80.7    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.6    
82.7    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.9    
84.0    
84.1    
84.2    
84.3    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.9    
86.0    
86.1    
86.2    
86.3    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.5    
87.6    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.2    
89.3    
89.4    
89.5    
89.6    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.2    
91.3    
91.4    
91.5    
91.6    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.5    
92.6    
92.7    
92.8    
92.9    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.5    
94.6    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.5    
96.6    
96.7    
96.8    
96.9    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.8    
97.9    
98.0    
98.1    
98.2    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 29 predictions from path traversal
Error with prediction: snap lend_intergenic: 18582, rend_intergenic: 15465  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21409, rend_intergenic: 19628  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28715, rend_intergenic: 22245  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29832, rend_intergenic: 28937  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37184, rend_intergenic: 37101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40381, rend_intergenic: 37295  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59583, rend_intergenic: 40440  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102385, rend_intergenic: 81802  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109260, rend_intergenic: 107283  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111946, rend_intergenic: 111279  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114442, rend_intergenic: 113508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136799, rend_intergenic: 134726  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146082, rend_intergenic: 143089  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147476, rend_intergenic: 147118  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 152267, rend_intergenic: 147792  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153860, rend_intergenic: 153767  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158360, rend_intergenic: 154052  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164014, rend_intergenic: 161756  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170065, rend_intergenic: 164805  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177652, rend_intergenic: 170160  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191140, rend_intergenic: 186029  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 14 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 231635 - 250171
-exon list size: 5


building trellis

14.3    
28.6    
42.9    
57.1    
71.4    
85.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 231998 - 250171
-exon list size: 4


building trellis

16.7    
33.3    
50.0    
66.7    
83.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support