-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_8/scaffold_8_12512125-12752825

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for CodingQuarry_transcript_59708-T1
Valid prediction for pasa_asmbl_52333.p1
Valid prediction for GeneMark_model.35921_t
Valid prediction for GlimmerHMM_glimmerT_21037-T1
Valid prediction for GlimmerHMM_glimmerT_21050-T1
Couldn't classify 191196, 191387
Sorry, prediction pasa_asmbl_52328.p1 fails validation.
(CTG)	 GC	191196-191387	GT	AGG
(ATC)	 AG	192658-192759	GT	AGG
(GCT)	 AG	192962-193096	TA	GAT
-recovered pasa_asmbl_52328.p1, terminal, 192962, 193096
-recovered pasa_asmbl_52328.p1, internal, 192658, 192759
Valid prediction for GlimmerHMM_glimmerT_21034-T1
Valid prediction for snap_scaffold_8-snap.2282-T1
Valid prediction for GlimmerHMM_glimmerT_21029-T1
Valid prediction for CodingQuarry_transcript_59715-T1
Valid prediction for Augustus_model.g14137.t1
Valid prediction for snap_scaffold_8-snap.2305-T1
Couldn't classify 48356, 48412
Couldn't classify 49512, 49587
Sorry, prediction pasa_asmbl_52310.p1 fails validation.
(TTC)	 GC	48356-48412	GT	AGG
(TCC)	 AG	48554-48723	GT	AGG
(CGT)	 AG	49512-49587	GA	GGG
-recovered pasa_asmbl_52310.p1, internal, 48554, 48723
Valid prediction for GlimmerHMM_glimmerT_21046-T1
Valid prediction for snap_scaffold_8-snap.2319-T1
Valid prediction for GlimmerHMM_glimmerT_21035-T1
Valid prediction for GeneMark_model.35894_t
Valid prediction for snap_scaffold_8-snap.2285-T1
Valid prediction for GeneMark_model.35923_t
Valid prediction for GeneMark_model.35913_t
Valid prediction for snap_scaffold_8-snap.2309-T1
Valid prediction for GeneMark_model.35892_t
Valid prediction for GlimmerHMM_glimmerT_21045-T1
Valid prediction for GeneMark_model.35926_t
Valid prediction for Augustus_model.g14148.t1
Couldn't classify 169505, 169531
Sorry, prediction pasa_asmbl_52316.p1 fails validation.
(ATG)	 CC	166913-166996	GT	TAG
(GAT)	 AG	167098-167196	GT	ACG
(AAG)	 AG	167533-167631	GT	ATG
(CAA)	 AG	168336-168434	GT	ATG
(AGG)	 AG	168707-168805	GT	AGG
(CAA)	 AG	169287-169382	GT	AAG
(GAG)	 AG	169505-169531	GA	GGG
-recovered pasa_asmbl_52316.p1, initial, 166913, 166996
-recovered pasa_asmbl_52316.p1, internal, 167098, 167196
-recovered pasa_asmbl_52316.p1, internal, 167533, 167631
-recovered pasa_asmbl_52316.p1, internal, 168336, 168434
-recovered pasa_asmbl_52316.p1, internal, 168707, 168805
-recovered pasa_asmbl_52316.p1, internal, 169287, 169382
Valid prediction for GeneMark_model.35924_t
Valid prediction for CodingQuarry_transcript_59714-T1
Valid prediction for GlimmerHMM_glimmerT_21057-T1
Valid prediction for CodingQuarry_transcript_59705-T1
Valid prediction for snap_scaffold_8-snap.2296-T1
Valid prediction for HiQ_model.g14139.t1
Valid prediction for GlimmerHMM_glimmerT_21053-T1
Valid prediction for snap_scaffold_8-snap.2318-T1
Valid prediction for GlimmerHMM_glimmerT_21055-T1
Valid prediction for CodingQuarry_transcript_59709-T1
Valid prediction for HiQ_model.g14146.t1
Valid prediction for pasa_asmbl_52320.p1
Valid prediction for GlimmerHMM_glimmerT_21040-T1
Valid prediction for snap_scaffold_8-snap.2283-T1
Valid prediction for GlimmerHMM_glimmerT_21065-T1
Valid prediction for GlimmerHMM_glimmerT_21044-T1
Valid prediction for snap_scaffold_8-snap.2321-T1
Valid prediction for GlimmerHMM_glimmerT_21039-T1
Valid prediction for GlimmerHMM_glimmerT_21063-T1
Valid prediction for Augustus_model.g14136.t1
Valid prediction for HiQ_model.g14116.t1
Valid prediction for GeneMark_model.35911_t
Couldn't classify 169997, 170062
Couldn't classify 170303, 170371
Sorry, prediction CodingQuarry_transcript_59703-T1 fails validation.
(ATG)	 CG	169997-170062	CT	ACC
(CCA)	 AC	170303-170371	CT	GAC
Valid prediction for GlimmerHMM_glimmerT_21033-T1
Valid prediction for GeneMark_model.35915_t
Valid prediction for GeneMark_model.35896_t
Valid prediction for HiQ_model.g14141.t1
Couldn't classify 58564, 58602
Sorry, prediction pasa_asmbl_52313.p1 fails validation.
(ATT)	 CC	58564-58602	GT	AGG
(AAC)	 AG	59770-59967	GT	AGG
(CTG)	 AG	60303-60517	GT	AGG
(CTG)	 AG	60732-61241	GT	AGG
(GCG)	 AG	61348-61449	GT	GGG
(AGT)	 AG	63192-63369	CC	AGC
-recovered pasa_asmbl_52313.p1, terminal, 63192, 63369
-recovered pasa_asmbl_52313.p1, internal, 59770, 59967
-recovered pasa_asmbl_52313.p1, internal, 60303, 60517
-recovered pasa_asmbl_52313.p1, internal, 60732, 61241
-recovered pasa_asmbl_52313.p1, internal, 61348, 61449
Valid prediction for snap_scaffold_8-snap.2304-T1
Valid prediction for GeneMark_model.35886_t
Valid prediction for GeneMark_model.35884_t
Valid prediction for Augustus_model.g14117.t1
Valid prediction for CodingQuarry_transcript_59707-T1
Valid prediction for GlimmerHMM_glimmerT_21032-T1
Valid prediction for GeneMark_model.35907_t
Valid prediction for snap_scaffold_8-snap.2313-T1
Valid prediction for pasa_asmbl_52306.p1
Valid prediction for HiQ_model.g14135.t1
Valid prediction for GlimmerHMM_glimmerT_21054-T1
Valid prediction for Augustus_model.g14118.t1
Valid prediction for snap_scaffold_8-snap.2308-T1
Valid prediction for snap_scaffold_8-snap.2291-T1
Valid prediction for GeneMark_model.35877_t
Valid prediction for GlimmerHMM_glimmerT_21041-T1
Valid prediction for snap_scaffold_8-snap.2307-T1
Valid prediction for snap_scaffold_8-snap.2303-T1
Valid prediction for GeneMark_model.35916_t
Valid prediction for GeneMark_model.35890_t
Valid prediction for Augustus_model.g14133.t1
Valid prediction for GeneMark_model.35912_t
Valid prediction for GlimmerHMM_glimmerT_21031-T1
Valid prediction for GlimmerHMM_glimmerT_21062-T1
Valid prediction for CodingQuarry_transcript_59706-T1
Valid prediction for pasa_asmbl_52329.p1
Valid prediction for HiQ_model.g14145.t1
Valid prediction for snap_scaffold_8-snap.2311-T1
Couldn't classify 220112, 220277
Sorry, prediction pasa_asmbl_52653.p1 fails validation.
(CTG)	 CA	220112-220277	GT	AGG
(GAG)	 AG	220372-220427	GT	AAG
(GCA)	 AG	220570-220810	GT	AGG
(GGT)	 AG	220906-221036	AA	GAA
-recovered pasa_asmbl_52653.p1, terminal, 220906, 221036
-recovered pasa_asmbl_52653.p1, internal, 220372, 220427
-recovered pasa_asmbl_52653.p1, internal, 220570, 220810
Valid prediction for GeneMark_model.35925_t
Valid prediction for GeneMark_model.35900_t
Valid prediction for GlimmerHMM_glimmerT_21043-T1
Valid prediction for Augustus_model.g14131.t1
Couldn't classify 184324, 185094
Sorry, prediction pasa_asmbl_52326.p1 fails validation.
(ATT)	 AC	184324-185094	GT	GGG
(GAG)	 AG	185275-185413	GT	GGG
(GGA)	 AG	185509-185739	GT	AGG
(AGG)	 AG	185848-185935	GT	CGG
(GAG)	 AG	186031-186166	TG	GAT
-recovered pasa_asmbl_52326.p1, terminal, 186031, 186166
-recovered pasa_asmbl_52326.p1, internal, 185275, 185413
-recovered pasa_asmbl_52326.p1, internal, 185509, 185739
-recovered pasa_asmbl_52326.p1, internal, 185848, 185935
Valid prediction for GeneMark_model.35917_t
Valid prediction for GeneMark_model.35902_t
Valid prediction for GeneMark_model.35919_t
Valid prediction for snap_scaffold_8-snap.2281-T1
Valid prediction for GeneMark_model.35878_t
Valid prediction for GeneMark_model.35882_t
Valid prediction for Augustus_model.g14132.t1
Valid prediction for pasa_asmbl_52331.p1
Valid prediction for GlimmerHMM_glimmerT_21066-T1
Valid prediction for GeneMark_model.35898_t
Valid prediction for Augustus_model.g14125.t1
Couldn't classify 23156, 23167
Couldn't classify 25431, 25526
Sorry, prediction pasa_asmbl_52309.p1 fails validation.
(AGA)	 TC	23156-23167	GT	AGG
(ATT)	 AG	23472-23576	GT	AAG
(GCA)	 AG	23822-23962	GT	CAG
(ACT)	 AG	25431-25526	GC	GGG
-recovered pasa_asmbl_52309.p1, internal, 23472, 23576
-recovered pasa_asmbl_52309.p1, internal, 23822, 23962
-recovered pasa_asmbl_52309.p1, internal, 25431, 25526
Valid prediction for snap_scaffold_8-snap.2297-T1
Couldn't classify 54808, 54903
Couldn't classify 57856, 57973
Sorry, prediction pasa_asmbl_52312.p1 fails validation.
(TCT)	 TC	54808-54903	GT	AGG
(GTA)	 AG	56350-56544	GT	AGG
(AGG)	 AG	56726-56877	GT	AGG
(GAA)	 AG	57856-57973	GT	AGG
-recovered pasa_asmbl_52312.p1, internal, 56350, 56544
-recovered pasa_asmbl_52312.p1, internal, 56726, 56877
-recovered pasa_asmbl_52312.p1, internal, 57856, 57973
Valid prediction for GlimmerHMM_glimmerT_21067-T1
Valid prediction for Augustus_model.g14123.t1
Couldn't classify 8419, 8540
Sorry, prediction pasa_asmbl_52305.p1 fails validation.
(ATG)	 GG	7927-8167	GT	TGG
(CCG)	 AG	8419-8540	GC	ATG
-recovered pasa_asmbl_52305.p1, initial, 7927, 8167
-recovered pasa_asmbl_52305.p1, internal, 8419, 8540
Valid prediction for GlimmerHMM_glimmerT_21038-T1
Valid prediction for GeneMark_model.35888_t
Valid prediction for snap_scaffold_8-snap.2280-T1
Valid prediction for GeneMark_model.35901_t
Couldn't classify 159186, 159281
Sorry, prediction pasa_asmbl_52314.p1 fails validation.
(GTC)	 AT	159186-159281	GT	AGG
(GTA)	 AG	159373-159471	GT	AGG
(GTG)	 AG	159583-159876	GT	TTG
(GTC)	 AG	159966-161531	TT	AAT
-recovered pasa_asmbl_52314.p1, terminal, 159966, 161531
-recovered pasa_asmbl_52314.p1, internal, 159373, 159471
-recovered pasa_asmbl_52314.p1, internal, 159583, 159876
Valid prediction for Augustus_model.g14122.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 22591, 22666
Sorry, prediction pasa_asmbl_53226.p1 fails validation.
(TGG)	 CC	22591-22666	GT	AGG
(ATG)	 AG	22747-22824	GT	TGG
(GAT)	 AG	22914-22987	GT	AGG
(GTG)	 AG	23067-23153	GT	ATG
(AAG)	 AG	23244-23334	GT	GCG
(ATA)	 AG	23508-23582	GT	CTG
(CCT)	 AG	23748-23812	GT	AGG
(GTC)	 AG	23944-23998	GT	TGG
(GGC)	 AG	24103-24149	GT	AGG
(AGT)	 AG	24242-24374	GT	CGG
(GAA)	 AG	24560-24633	GT	TGG
(GTC)	 AG	24740-24841	GT	AGG
(GTG)	 AG	24949-25024	GT	AGG
(GCA)	 AG	25159-25266	GT	AGG
(GTT)	 AG	25363-25442	TT	GAT
-recovered pasa_asmbl_53226.p1, initial, 22747, 22824
-recovered pasa_asmbl_53226.p1, terminal, 25363, 25442
-recovered pasa_asmbl_53226.p1, internal, 22747, 22824
-recovered pasa_asmbl_53226.p1, internal, 22914, 22987
-recovered pasa_asmbl_53226.p1, internal, 23067, 23153
-recovered pasa_asmbl_53226.p1, internal, 23244, 23334
-recovered pasa_asmbl_53226.p1, internal, 23508, 23582
-recovered pasa_asmbl_53226.p1, internal, 23748, 23812
-recovered pasa_asmbl_53226.p1, internal, 23944, 23998
-recovered pasa_asmbl_53226.p1, internal, 24103, 24149
-recovered pasa_asmbl_53226.p1, internal, 24242, 24374
-recovered pasa_asmbl_53226.p1, internal, 24560, 24633
-recovered pasa_asmbl_53226.p1, internal, 24740, 24841
-recovered pasa_asmbl_53226.p1, internal, 24949, 25024
-recovered pasa_asmbl_53226.p1, internal, 25159, 25266
Valid prediction for Augustus_model.g14121.t1
Valid prediction for snap_scaffold_8-snap.2317-T1
Valid prediction for GeneMark_model.35909_t
Valid prediction for GeneMark_model.35904_t
Valid prediction for snap_scaffold_8-snap.2293-T1
Valid prediction for GeneMark_model.35906_t
Valid prediction for Augustus_model.g14124.t1
Valid prediction for GlimmerHMM_glimmerT_21052-T1
Valid prediction for GeneMark_model.35899_t
Valid prediction for CodingQuarry_transcript_59712-T1
Valid prediction for HiQ_model.g14134.t1
Couldn't classify 112157, 112347
Sorry, prediction pasa_asmbl_53218.p1 fails validation.
(AGG)	 CT	112157-112347	GT	AGG
(GTT)	 AG	114548-114684	GT	GGG
(GCA)	 AG	114887-115060	GT	TGG
(GGA)	 AG	115175-115277	GT	AGG
(GAC)	 AG	115388-115584	GT	GAG
(TTC)	 AG	116108-116195	GT	AGG
(CCT)	 AG	116305-116408	GT	AGG
(GTC)	 AG	117342-117471	GT	AAG
(GTG)	 AG	119815-119927	GT	TGG
(CTG)	 AG	121610-121707	AC	GAA
-recovered pasa_asmbl_53218.p1, terminal, 121610, 121707
-recovered pasa_asmbl_53218.p1, internal, 114548, 114684
-recovered pasa_asmbl_53218.p1, internal, 114887, 115060
-recovered pasa_asmbl_53218.p1, internal, 115175, 115277
-recovered pasa_asmbl_53218.p1, internal, 115388, 115584
-recovered pasa_asmbl_53218.p1, internal, 116108, 116195
-recovered pasa_asmbl_53218.p1, internal, 116305, 116408
-recovered pasa_asmbl_53218.p1, internal, 117342, 117471
-recovered pasa_asmbl_53218.p1, internal, 119815, 119927
Valid prediction for CodingQuarry_transcript_59716-T1
Valid prediction for snap_scaffold_8-snap.2310-T1
Valid prediction for Augustus_model.g14144.t1
Valid prediction for GlimmerHMM_glimmerT_21048-T1
Valid prediction for GeneMark_model.35885_t
Valid prediction for GeneMark_model.35922_t
Valid prediction for GlimmerHMM_glimmerT_21051-T1
Valid prediction for snap_scaffold_8-snap.2322-T1
Valid prediction for GlimmerHMM_glimmerT_21060-T1
Valid prediction for HiQ_model.g14147.t1
Valid prediction for GeneMark_model.35887_t
Couldn't classify 235923, 236243
Sorry, prediction pasa_asmbl_53207.p1 fails validation.
(GAT)	 TG	235923-236243	AT	ACA
Valid prediction for CodingQuarry_transcript_59713-T1
Valid prediction for GeneMark_model.35905_t
Valid prediction for GlimmerHMM_glimmerT_21047-T1
Valid prediction for GlimmerHMM_glimmerT_21059-T1
Valid prediction for snap_scaffold_8-snap.2288-T1
Valid prediction for snap_scaffold_8-snap.2316-T1
Valid prediction for CodingQuarry_transcript_59701-T1
Valid prediction for GlimmerHMM_glimmerT_21030-T1
Couldn't classify 125317, 125494
Sorry, prediction pasa_asmbl_53213.p1 fails validation.
(TCC)	 CT	125317-125494	GT	AGG
(GTT)	 AG	125736-125883	GT	TGG
(CCG)	 AG	125973-126051	GT	TGG
(GGT)	 AG	126142-126188	GT	AGG
(CCT)	 AG	126298-126400	GT	AGG
(GAA)	 AG	126718-126797	GT	ACG
(GTT)	 AG	127150-127225	GC	AGG
(AAT)	 AG	127340-127433	GT	AGG
(GTG)	 AG	127541-127788	TT	GAT
-recovered pasa_asmbl_53213.p1, terminal, 127541, 127788
-recovered pasa_asmbl_53213.p1, internal, 125736, 125883
-recovered pasa_asmbl_53213.p1, internal, 125973, 126051
-recovered pasa_asmbl_53213.p1, internal, 126142, 126188
-recovered pasa_asmbl_53213.p1, internal, 126298, 126400
-recovered pasa_asmbl_53213.p1, internal, 126718, 126797
-recovered pasa_asmbl_53213.p1, internal, 127150, 127225
-recovered pasa_asmbl_53213.p1, internal, 127340, 127433
Valid prediction for snap_scaffold_8-snap.2284-T1
Valid prediction for GeneMark_model.35908_t
Couldn't classify 44354, 46045
Sorry, prediction pasa_asmbl_53221.p1 fails validation.
(AGT)	 CC	44354-46045	TT	AAT
Valid prediction for snap_scaffold_8-snap.2290-T1
Valid prediction for pasa_asmbl_53223.p1
Valid prediction for GlimmerHMM_glimmerT_21049-T1
Valid prediction for pasa_asmbl_53219.p1
Valid prediction for GeneMark_model.35879_t
Couldn't classify 169500, 170012
Sorry, prediction pasa_asmbl_53210.p1 fails validation.
(CTG)	 CC	169500-170012	AA	ACA
Valid prediction for pasa_asmbl_53229.p1
Valid prediction for snap_scaffold_8-snap.2279-T1
Couldn't classify 38692, 38806
Sorry, prediction pasa_asmbl_53222.p1 fails validation.
(CGA)	 GC	38692-38806	GT	TAG
(GAT)	 AG	38966-39097	GT	CCG
(CAA)	 AG	39540-39630	GT	AAG
(GAA)	 AG	39747-40170	TG	GAT
-recovered pasa_asmbl_53222.p1, terminal, 39747, 40170
-recovered pasa_asmbl_53222.p1, internal, 38966, 39097
-recovered pasa_asmbl_53222.p1, internal, 39540, 39630
Valid prediction for snap_scaffold_8-snap.2289-T1
Valid prediction for GlimmerHMM_glimmerT_21042-T1
Valid prediction for CodingQuarry_transcript_59702-T1
Valid prediction for Augustus_model.g14127.t1
Valid prediction for Augustus_model.g14119.t1
Valid prediction for GeneMark_model.35920_t
Valid prediction for CodingQuarry_transcript_59710-T1
Valid prediction for snap_scaffold_8-snap.2302-T1
Valid prediction for snap_scaffold_8-snap.2312-T1
Valid prediction for GeneMark_model.35881_t
Valid prediction for Augustus_model.g14130.t1
Valid prediction for snap_scaffold_8-snap.2306-T1
Valid prediction for snap_scaffold_8-snap.2314-T1
Valid prediction for snap_scaffold_8-snap.2298-T1
Valid prediction for GlimmerHMM_glimmerT_21056-T1
Valid prediction for CodingQuarry_transcript_59704-T1
Valid prediction for GeneMark_model.35903_t
Valid prediction for snap_scaffold_8-snap.2287-T1
Valid prediction for GeneMark_model.35914_t
Valid prediction for snap_scaffold_8-snap.2295-T1
Valid prediction for Augustus_model.g14138.t1
Valid prediction for GeneMark_model.35883_t
Valid prediction for snap_scaffold_8-snap.2294-T1
Valid prediction for snap_scaffold_8-snap.2299-T1
Valid prediction for GeneMark_model.35880_t
Valid prediction for GlimmerHMM_glimmerT_21058-T1
Valid prediction for HiQ_model.g14142.t1
Valid prediction for snap_scaffold_8-snap.2292-T1
Valid prediction for Augustus_model.g14126.t1
Valid prediction for snap_scaffold_8-snap.2300-T1
Valid prediction for Augustus_model.g14143.t1
Valid prediction for GlimmerHMM_glimmerT_21064-T1
Valid prediction for GeneMark_model.35895_t
Valid prediction for pasa_asmbl_53211.p1
Valid prediction for HiQ_model.g14129.t1
Valid prediction for GeneMark_model.35910_t
Valid prediction for snap_scaffold_8-snap.2301-T1
Valid prediction for HiQ_model.g14140.t1
Valid prediction for GeneMark_model.35918_t
Valid prediction for GlimmerHMM_glimmerT_21036-T1
Valid prediction for Augustus_model.g14120.t1
Valid prediction for CodingQuarry_transcript_59711-T1
Valid prediction for snap_scaffold_8-snap.2320-T1
Valid prediction for GeneMark_model.35889_t
Valid prediction for Augustus_model.g14115.t1
Valid prediction for snap_scaffold_8-snap.2286-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for HiQ_model.g14128.t1
Valid prediction for snap_scaffold_8-snap.2315-T1
Valid prediction for GlimmerHMM_glimmerT_21061-T1
Valid prediction for GeneMark_model.35891_t
Valid prediction for GeneMark_model.35897_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 43010, rend_intergenic: 34407  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61453, rend_intergenic: 43571  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75332, rend_intergenic: 74237  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100569, rend_intergenic: 86637  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 238797, rend_intergenic: 233674  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 240701
-exon list size: 842


building trellis

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9.4    
9.5    
9.6    
9.7    
9.8    
10.0    
10.1    
10.2    
10.3    
10.4    
10.5    
10.7    
10.8    
10.9    
11.0    
11.1    
11.3    
11.4    
11.5    
11.6    
11.7    
11.8    
12.0    
12.1    
12.2    
12.3    
12.4    
12.6    
12.7    
12.8    
12.9    
13.0    
13.2    
13.3    
13.4    
13.5    
13.6    
13.7    
13.9    
14.0    
14.1    
14.2    
14.3    
14.5    
14.6    
14.7    
14.8    
14.9    
15.0    
15.2    
15.3    
15.4    
15.5    
15.6    
15.8    
15.9    
16.0    
16.1    
16.2    
16.4    
16.5    
16.6    
16.7    
16.8    
16.9    
17.1    
17.2    
17.3    
17.4    
17.5    
17.7    
17.8    
17.9    
18.0    
18.1    
18.2    
18.4    
18.5    
18.6    
18.7    
18.8    
19.0    
19.1    
19.2    
19.3    
19.4    
19.5    
19.7    
19.8    
19.9    
20.0    
20.1    
20.3    
20.4    
20.5    
20.6    
20.7    
20.9    
21.0    
21.1    
21.2    
21.3    
21.4    
21.6    
21.7    
21.8    
21.9    
22.0    
22.2    
22.3    
22.4    
22.5    
22.6    
22.7    
22.9    
23.0    
23.1    
23.2    
23.3    
23.5    
23.6    
23.7    
23.8    
23.9    
24.1    
24.2    
24.3    
24.4    
24.5    
24.6    
24.8    
24.9    
25.0    
25.1    
25.2    
25.4    
25.5    
25.6    
25.7    
25.8    
25.9    
26.1    
26.2    
26.3    
26.4    
26.5    
26.7    
26.8    
26.9    
27.0    
27.1    
27.3    
27.4    
27.5    
27.6    
27.7    
27.8    
28.0    
28.1    
28.2    
28.3    
28.4    
28.6    
28.7    
28.8    
28.9    
29.0    
29.1    
29.3    
29.4    
29.5    
29.6    
29.7    
29.9    
30.0    
30.1    
30.2    
30.3    
30.5    
30.6    
30.7    
30.8    
30.9    
31.0    
31.2    
31.3    
31.4    
31.5    
31.6    
31.8    
31.9    
32.0    
32.1    
32.2    
32.3    
32.5    
32.6    
32.7    
32.8    
32.9    
33.1    
33.2    
33.3    
33.4    
33.5    
33.6    
33.8    
33.9    
34.0    
34.1    
34.2    
34.4    
34.5    
34.6    
34.7    
34.8    
35.0    
35.1    
35.2    
35.3    
35.4    
35.5    
35.7    
35.8    
35.9    
36.0    
36.1    
36.3    
36.4    
36.5    
36.6    
36.7    
36.8    
37.0    
37.1    
37.2    
37.3    
37.4    
37.6    
37.7    
37.8    
37.9    
38.0    
38.2    
38.3    
38.4    
38.5    
38.6    
38.7    
38.9    
39.0    
39.1    
39.2    
39.3    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.2    
40.3    
40.4    
40.5    
40.6    
40.8    
40.9    
41.0    
41.1    
41.2    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.1    
42.2    
42.3    
42.4    
42.5    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.4    
43.5    
43.6    
43.7    
43.8    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.7    
44.8    
44.9    
45.0    
45.1    
45.3    
45.4    
45.5    
45.6    
45.7    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.6    
46.7    
46.8    
46.9    
47.0    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.9    
48.0    
48.1    
48.2    
48.3    
48.5    
48.6    
48.7    
48.8    
48.9    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.8    
49.9    
50.0    
50.1    
50.2    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.1    
51.2    
51.3    
51.4    
51.5    
51.7    
51.8    
51.9    
52.0    
52.1    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
53.0    
53.1    
53.2    
53.3    
53.4    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.3    
54.4    
54.5    
54.6    
54.7    
54.9    
55.0    
55.1    
55.2    
55.3    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.5    
56.6    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.5    
57.6    
57.7    
57.8    
57.9    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.8    
58.9    
59.0    
59.1    
59.2    
59.4    
59.5    
59.6    
59.7    
59.8    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.7    
60.8    
60.9    
61.0    
61.1    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
62.0    
62.1    
62.2    
62.3    
62.4    
62.6    
62.7    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.9    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.2    
65.3    
65.4    
65.5    
65.6    
65.8    
65.9    
66.0    
66.1    
66.2    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.1    
67.2    
67.3    
67.4    
67.5    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.4    
68.5    
68.6    
68.7    
68.8    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.0    
70.1    
70.3    
70.4    
70.5    
70.6    
70.7    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
71.9    
72.0    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.9    
73.0    
73.1    
73.2    
73.3    
73.5    
73.6    
73.7    
73.8    
73.9    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.8    
74.9    
75.0    
75.1    
75.2    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.4    
76.5    
76.7    
76.8    
76.9    
77.0    
77.1    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
78.0    
78.1    
78.2    
78.3    
78.4    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.3    
79.4    
79.5    
79.6    
79.7    
79.9    
80.0    
80.1    
80.2    
80.3    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.5    
81.6    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.5    
82.6    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.8    
83.9    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.7    
84.8    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.7    
85.8    
85.9    
86.0    
86.1    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
87.0    
87.1    
87.2    
87.3    
87.4    
87.6    
87.7    
87.8    
87.9    
88.0    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.9    
89.0    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.2    
90.3    
90.4    
90.5    
90.6    
90.8    
90.9    
91.0    
91.1    
91.2    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.1    
92.2    
92.3    
92.4    
92.5    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.4    
93.5    
93.6    
93.7    
93.8    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.7    
94.8    
94.9    
95.0    
95.1    
95.3    
95.4    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.6    
96.7    
96.8    
96.9    
97.0    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.9    
98.0    
98.1    
98.2    
98.3    
98.5    
98.6    
98.7    
98.8    
98.9    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 41 predictions from path traversal
Error with prediction: snap lend_intergenic: 43010, rend_intergenic: 34407  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61453, rend_intergenic: 43571  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75332, rend_intergenic: 74237  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100569, rend_intergenic: 86637  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 238797, rend_intergenic: 233674  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 30 predictions persist after filtering for low support