-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_8/scaffold_8_11606134-11935927

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_8-snap.2203-T1
Valid prediction for pasa_asmbl_52252.p1
Valid prediction for GeneMark_model.35787_t
Valid prediction for GeneMark_model.35786_t
Valid prediction for snap_scaffold_8-snap.2179-T1
Valid prediction for HiQ_model.g14057.t1
Valid prediction for HiQ_model.g14063.t1
Valid prediction for snap_scaffold_8-snap.2183-T1
Valid prediction for snap_scaffold_8-snap.2169-T1
Valid prediction for snap_scaffold_8-snap.2168-T1
Valid prediction for snap_scaffold_8-snap.2170-T1
Valid prediction for pasa_asmbl_52258.p1
Couldn't classify 147333, 147432
Sorry, prediction pasa_asmbl_52249.p1 fails validation.
(CAG)	 GC	147333-147432	GT	AGG
(GTT)	 AG	147597-147694	GT	AGG
(GTG)	 AG	147875-148036	TT	GAT
-recovered pasa_asmbl_52249.p1, terminal, 147875, 148036
-recovered pasa_asmbl_52249.p1, internal, 147597, 147694
Valid prediction for GlimmerHMM_glimmerT_20967-T1
Valid prediction for snap_scaffold_8-snap.2158-T1
Valid prediction for snap_scaffold_8-snap.2188-T1
Valid prediction for Augustus_model.g14067.t1
Valid prediction for Augustus_model.g14058.t1
Valid prediction for GeneMark_model.35793_t
Valid prediction for GeneMark_model.35767_t
Valid prediction for GlimmerHMM_glimmerT_20950-T1
Valid prediction for GlimmerHMM_glimmerT_20966-T1
Couldn't classify 194675, 194818
Couldn't classify 197158, 197192
Sorry, prediction pasa_asmbl_52253.p1 fails validation.
(ATT)	 TT	194675-194818	GT	AGG
(ACC)	 AG	195278-195340	GT	CTG
(GTG)	 AG	195652-195741	GT	AGG
(CTT)	 AG	195825-195911	GT	TGG
(GAC)	 AG	196004-196108	GT	AGG
(GAC)	 AG	196353-196538	GT	AGG
(GAA)	 AG	196974-197064	GT	AGG
(GGA)	 AG	197158-197192	AC	AGA
-recovered pasa_asmbl_52253.p1, internal, 195278, 195340
-recovered pasa_asmbl_52253.p1, internal, 195652, 195741
-recovered pasa_asmbl_52253.p1, internal, 195825, 195911
-recovered pasa_asmbl_52253.p1, internal, 196004, 196108
-recovered pasa_asmbl_52253.p1, internal, 196353, 196538
-recovered pasa_asmbl_52253.p1, internal, 196974, 197064
Valid prediction for GlimmerHMM_glimmerT_20952-T1
Valid prediction for CodingQuarry_transcript_59682-T1
Valid prediction for GeneMark_model.35783_t
Valid prediction for GlimmerHMM_glimmerT_20961-T1
Valid prediction for snap_scaffold_8-snap.2185-T1
Valid prediction for GlimmerHMM_glimmerT_20959-T1
Valid prediction for GlimmerHMM_glimmerT_20975-T1
Valid prediction for GeneMark_model.35785_t
Valid prediction for CodingQuarry_transcript_59687-T1
Valid prediction for Augustus_model.g14076.t1
Valid prediction for pasa_asmbl_52247.p1
Couldn't classify 2212, 2412
Couldn't classify 3492, 3533
Sorry, prediction pasa_asmbl_52235.p1 fails validation.
(TGT)	 CA	2212-2412	GT	AGG
(GAA)	 AG	3126-3209	GT	AGG
(GTG)	 AG	3492-3533	CT	ACC
-recovered pasa_asmbl_52235.p1, internal, 3126, 3209
Couldn't classify 220488, 220636
Sorry, prediction pasa_asmbl_52261.p1 fails validation.
(AGG)	 AA	220488-220636	GT	CTG
(GTG)	 AG	222257-222518	GT	AGG
(GTG)	 AG	222604-222740	GT	AGG
(AAG)	 AG	223239-223503	GT	AGG
(GAG)	 AG	223701-223841	GT	AGG
(AAT)	 AG	224545-224586	GT	CGG
(ATT)	 AG	224860-224903	GT	AGG
(TAA)	 AG	225777-225858	GT	AGG
(ATC)	 AG	226412-226552	GT	AGG
(GAT)	 AG	226680-226799	GT	CAG
(GAA)	 AG	227353-227436	GT	GGG
(GGG)	 AG	227579-227677	AA	GAA
-recovered pasa_asmbl_52261.p1, terminal, 222604, 222740
-recovered pasa_asmbl_52261.p1, terminal, 227579, 227677
-recovered pasa_asmbl_52261.p1, internal, 222257, 222518
-recovered pasa_asmbl_52261.p1, internal, 222604, 222740
-recovered pasa_asmbl_52261.p1, internal, 223239, 223503
-recovered pasa_asmbl_52261.p1, internal, 223701, 223841
-recovered pasa_asmbl_52261.p1, internal, 224545, 224586
-recovered pasa_asmbl_52261.p1, internal, 224860, 224903
-recovered pasa_asmbl_52261.p1, internal, 225777, 225858
-recovered pasa_asmbl_52261.p1, internal, 226412, 226552
-recovered pasa_asmbl_52261.p1, internal, 226680, 226799
-recovered pasa_asmbl_52261.p1, internal, 227353, 227436
Couldn't classify 4023, 4063
Couldn't classify 4738, 5065
Sorry, prediction pasa_asmbl_52237.p2 fails validation.
(TCG)	 CG	4023-4063	GT	AGG
(CTT)	 AG	4738-5065	CG	TCC
Couldn't classify 5887, 5929
Couldn't classify 7205, 7449
Sorry, prediction pasa_asmbl_52238.p1 fails validation.
(AAC)	 TG	5887-5929	GT	AGG
(GTG)	 AG	6216-6426	GT	AGG
(GCA)	 AG	6654-6820	GT	TTG
(CTC)	 AG	6966-7082	GT	AGG
(GTG)	 AG	7205-7449	GG	AGG
-recovered pasa_asmbl_52238.p1, internal, 6216, 6426
-recovered pasa_asmbl_52238.p1, internal, 6654, 6820
-recovered pasa_asmbl_52238.p1, internal, 6966, 7082
Valid prediction for snap_scaffold_8-snap.2181-T1
Couldn't classify 134878, 134956
Sorry, prediction pasa_asmbl_52245.p1 fails validation.
(GAG)	 CA	134878-134956	GT	AGG
(GTG)	 AG	135079-135209	GT	AGG
(TTT)	 AG	135407-135520	GT	AGG
(GAC)	 AG	135678-135779	GT	AGG
(AAT)	 AG	135966-136292	CT	GAC
-recovered pasa_asmbl_52245.p1, terminal, 135966, 136292
-recovered pasa_asmbl_52245.p1, internal, 135079, 135209
-recovered pasa_asmbl_52245.p1, internal, 135407, 135520
-recovered pasa_asmbl_52245.p1, internal, 135678, 135779
Valid prediction for Augustus_model.g14065.t1
Valid prediction for Augustus_model.g14053.t1
Valid prediction for pasa_asmbl_52270.p1
Valid prediction for GlimmerHMM_glimmerT_20957-T1
Valid prediction for snap_scaffold_8-snap.2186-T1
Valid prediction for snap_scaffold_8-snap.2189-T1
Valid prediction for GlimmerHMM_glimmerT_20953-T1
Valid prediction for GeneMark_model.35763_t
Valid prediction for snap_scaffold_8-snap.2182-T1
Valid prediction for GlimmerHMM_glimmerT_20964-T1
Couldn't classify 8773, 8987
Couldn't classify 9593, 9738
Sorry, prediction pasa_asmbl_52240.p1 fails validation.
(GCC)	 AG	8773-8987	GT	AGG
(GTA)	 AG	9087-9139	GT	GGG
(AGG)	 AG	9222-9422	GT	AGG
(GAT)	 AG	9593-9738	AT	TCA
add_exon() Sorry, pasa_asmbl_52240.p1 9222-9422-terminal-1 is invalid.
-recovered pasa_asmbl_52240.p1, terminal, 9222, 9422
-recovered pasa_asmbl_52240.p1, internal, 8773, 8987
-recovered pasa_asmbl_52240.p1, internal, 9087, 9139
-recovered pasa_asmbl_52240.p1, internal, 9222, 9422
Valid prediction for GeneMark_model.35772_t
Valid prediction for snap_scaffold_8-snap.2171-T1
Couldn't classify 189, 357
Couldn't classify 1410, 1487
Sorry, prediction pasa_asmbl_52234.p1 fails validation.
(ACG)	 GC	189-357	GT	AGG
(CCC)	 AG	530-685	GT	AGG
(GAG)	 AG	944-1050	GT	AGG
(GTG)	 AG	1159-1269	GT	AGG
(GGA)	 AG	1410-1487	GT	TGG
-recovered pasa_asmbl_52234.p1, internal, 530, 685
-recovered pasa_asmbl_52234.p1, internal, 944, 1050
-recovered pasa_asmbl_52234.p1, internal, 1159, 1269
-recovered pasa_asmbl_52234.p1, internal, 1410, 1487
Valid prediction for GlimmerHMM_glimmerT_20960-T1
Valid prediction for CodingQuarry_transcript_59678-T1
Valid prediction for CodingQuarry_transcript_59683-T1
Valid prediction for GeneMark_model.35782_t
Valid prediction for GlimmerHMM_glimmerT_20969-T1
Valid prediction for CodingQuarry_transcript_59686-T1
Valid prediction for Augustus_model.g14070.t1
Valid prediction for GlimmerHMM_glimmerT_20951-T1
Valid prediction for snap_scaffold_8-snap.2191-T1
Couldn't classify 233734, 234057
Sorry, prediction pasa_asmbl_53583.p2 fails validation.
(ATG)	 CA	233734-234057	CT	AGC
Valid prediction for HiQ_model.g14066.t1
Valid prediction for HiQ_model.g14068.t1
Valid prediction for snap_scaffold_8-snap.2172-T1
Valid prediction for snap_scaffold_8-snap.2178-T1
Valid prediction for Augustus_model.g14056.t1
Couldn't classify 197773, 197793
Sorry, prediction pasa_asmbl_52254.p1 fails validation.
(CGG)	 CC	197773-197793	GT	CTG
(GGT)	 AG	197925-198038	GT	AGG
(CTG)	 AG	198141-198207	GT	AGG
(CAG)	 AG	198470-198630	GT	AGG
(TGC)	 AG	198961-199557	GA	GAG
-recovered pasa_asmbl_52254.p1, terminal, 198961, 199557
-recovered pasa_asmbl_52254.p1, internal, 197925, 198038
-recovered pasa_asmbl_52254.p1, internal, 198141, 198207
-recovered pasa_asmbl_52254.p1, internal, 198470, 198630
Valid prediction for GlimmerHMM_glimmerT_20962-T1
Valid prediction for pasa_asmbl_52242.p1
Valid prediction for GeneMark_model.35780_t
Valid prediction for GeneMark_model.35770_t
Valid prediction for GeneMark_model.35777_t
Valid prediction for Augustus_model.g14054.t1
Valid prediction for pasa_asmbl_52257.p1
Valid prediction for Augustus_model.g14055.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for CodingQuarry_transcript_59676-T1
Couldn't classify 258063, 258212
Sorry, prediction pasa_asmbl_53151.p1 fails validation.
(TGT)	 GT	258063-258212	GT	TGG
(TAT)	 AG	258933-259007	GT	TGG
(CTG)	 AG	260233-260331	GT	CAG
(ATG)	 AG	260561-260734	GT	CGG
(GGA)	 AG	260879-260962	GT	AGG
(CTT)	 AG	261252-261329	AG	GAA
-recovered pasa_asmbl_53151.p1, initial, 260561, 260734
-recovered pasa_asmbl_53151.p1, terminal, 261252, 261329
-recovered pasa_asmbl_53151.p1, internal, 258933, 259007
-recovered pasa_asmbl_53151.p1, internal, 260233, 260331
-recovered pasa_asmbl_53151.p1, internal, 260561, 260734
-recovered pasa_asmbl_53151.p1, internal, 260879, 260962
Valid prediction for GlimmerHMM_glimmerT_20947-T1
Valid prediction for pasa_asmbl_53169.p1
Valid prediction for GeneMark_model.35774_t
Valid prediction for snap_scaffold_8-snap.2204-T1
Valid prediction for GlimmerHMM_glimmerT_20956-T1
Valid prediction for GeneMark_model.35788_t
Valid prediction for GeneMark_model.35765_t
Valid prediction for Augustus_model.g14077.t1
Valid prediction for GlimmerHMM_glimmerT_20968-T1
Valid prediction for Augustus_model.g14052.t1
Valid prediction for snap_scaffold_8-snap.2167-T1
Valid prediction for CodingQuarry_transcript_59680-T1
Valid prediction for snap_scaffold_8-snap.2205-T1
Valid prediction for GeneMark_model.35766_t
Valid prediction for HiQ_model.g14059.t1
Valid prediction for GeneMark_model.35784_t
Valid prediction for GeneMark_model.35775_t
Valid prediction for pasa_asmbl_53164.p1
Valid prediction for Augustus_model.g14072.t1
Valid prediction for pasa_asmbl_53165.p1
Valid prediction for snap_scaffold_8-snap.2166-T1
Valid prediction for snap_scaffold_8-snap.2161-T1
Valid prediction for Augustus_model.g14049.t1
Valid prediction for GlimmerHMM_glimmerT_20972-T1
Valid prediction for Augustus_model.g14061.t1
Valid prediction for Augustus_model.g14073.t1
Valid prediction for snap_scaffold_8-snap.2200-T1
Valid prediction for CodingQuarry_transcript_59681-T1
Valid prediction for HiQ_model.g14075.t1
Valid prediction for snap_scaffold_8-snap.2195-T1
Valid prediction for snap_scaffold_8-snap.2157-T1
Valid prediction for CodingQuarry_transcript_59677-T1
Valid prediction for Augustus_model.g14048.t1
Valid prediction for GeneMark_model.35769_t
Valid prediction for snap_scaffold_8-snap.2202-T1
Couldn't classify 222660, 222801
Sorry, prediction pasa_asmbl_53154.p1 fails validation.
(ATG)	 GT	222059-222233	GT	CCG
(GGT)	 AG	222413-222560	GT	AGG
(GTT)	 AG	222660-222801	CA	CCC
-recovered pasa_asmbl_53154.p1, initial, 222059, 222233
-recovered pasa_asmbl_53154.p1, internal, 222413, 222560
Valid prediction for pasa_asmbl_53172.p1
Valid prediction for Augustus_model.g14064.t1
Valid prediction for snap_scaffold_8-snap.2174-T1
Valid prediction for Augustus_model.g14050.t1
Valid prediction for snap_scaffold_8-snap.2199-T1
Valid prediction for Augustus_model.g14074.t1
Valid prediction for HiQ_model.g14071.t1
Valid prediction for GeneMark_model.35792_t
Valid prediction for snap_scaffold_8-snap.2194-T1
Valid prediction for GeneMark_model.35778_t
Valid prediction for GlimmerHMM_glimmerT_20963-T1
Valid prediction for snap_scaffold_8-snap.2193-T1
Valid prediction for GlimmerHMM_glimmerT_20954-T1
Valid prediction for pasa_asmbl_53147.p1
Valid prediction for GeneMark_model.35790_t
Valid prediction for HiQ_model.g14047.t1
Valid prediction for snap_scaffold_8-snap.2162-T1
Valid prediction for snap_scaffold_8-snap.2165-T1
Valid prediction for snap_scaffold_8-snap.2196-T1
Valid prediction for snap_scaffold_8-snap.2184-T1
Valid prediction for snap_scaffold_8-snap.2163-T1
Valid prediction for GlimmerHMM_glimmerT_20974-T1
Valid prediction for HiQ_model.g14062.t1
Valid prediction for GlimmerHMM_glimmerT_20948-T1
Valid prediction for GlimmerHMM_glimmerT_20970-T1
Valid prediction for CodingQuarry_transcript_59675-T1
Couldn't classify 216705, 216857
Couldn't classify 217506, 217572
Couldn't classify 217917, 218038
Sorry, prediction pasa_asmbl_53155.p1 fails validation.
(TTA)	 GT	216705-216857	GT	TGG
(GTC)	 AG	217506-217572	AT	AAA
(TTG)	 AC	217917-218038	AG	GAA
Valid prediction for GlimmerHMM_glimmerT_20965-T1
Valid prediction for Augustus_model.g14051.t1
Valid prediction for GlimmerHMM_glimmerT_20958-T1
Valid prediction for CodingQuarry_transcript_59679-T1
Valid prediction for GeneMark_model.35795_t
Valid prediction for snap_scaffold_8-snap.2176-T1
Couldn't classify 223218, 223380
Sorry, prediction pasa_asmbl_53152.p1 fails validation.
(CGG)	 AA	223218-223380	GT	TGG
(ATT)	 AG	223572-223591	GT	AGG
(TTT)	 AG	223677-223813	GT	CGG
(ACG)	 AG	223949-224148	GT	ATG
(TAA)	 AG	224263-225764	GC	AAG
-recovered pasa_asmbl_53152.p1, terminal, 224263, 225764
-recovered pasa_asmbl_53152.p1, internal, 223572, 223591
-recovered pasa_asmbl_53152.p1, internal, 223677, 223813
-recovered pasa_asmbl_53152.p1, internal, 223949, 224148
-recovered pasa_asmbl_53152.p1, internal, 224263, 225764
Valid prediction for snap_scaffold_8-snap.2175-T1
Valid prediction for Augustus_model.g14069.t1
Valid prediction for GeneMark_model.35794_t
Valid prediction for Augustus_model.g14060.t1
Couldn't classify 94795, 95535
Sorry, prediction pasa_asmbl_53590.p1 fails validation.
(ATG)	 GA	94795-95535	CA	CCC
Valid prediction for snap_scaffold_8-snap.2160-T1
Valid prediction for GeneMark_model.35764_t
Valid prediction for CodingQuarry_transcript_59689-T1
Valid prediction for GeneMark_model.35773_t
Valid prediction for GeneMark_model.35789_t
Valid prediction for GeneMark_model.35779_t
Valid prediction for GeneMark_model.35776_t
Valid prediction for snap_scaffold_8-snap.2190-T1
Valid prediction for GlimmerHMM_glimmerT_20973-T1
Valid prediction for snap_scaffold_8-snap.2173-T1
Valid prediction for snap_scaffold_8-snap.2201-T1
Valid prediction for snap_scaffold_8-snap.2164-T1
Valid prediction for snap_scaffold_8-snap.2159-T1
Valid prediction for snap_scaffold_8-snap.2192-T1
Valid prediction for GlimmerHMM_glimmerT_20955-T1
Valid prediction for snap_scaffold_8-snap.2180-T1
Valid prediction for GlimmerHMM_glimmerT_20976-T1
Valid prediction for pasa_asmbl_53163.p1
Valid prediction for GeneMark_model.35791_t
Valid prediction for snap_scaffold_8-snap.2198-T1
Valid prediction for CodingQuarry_transcript_59688-T1
Valid prediction for GeneMark_model.35768_t
Valid prediction for GeneMark_model.35796_t
Valid prediction for GlimmerHMM_glimmerT_20949-T1
Valid prediction for snap_scaffold_8-snap.2177-T1
Valid prediction for snap_scaffold_8-snap.2197-T1
Valid prediction for snap_scaffold_8-snap.2187-T1
Valid prediction for GlimmerHMM_glimmerT_20971-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 25143, rend_intergenic: 22978  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 329794
-exon list size: 621


building trellis

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43.5    
43.7    
43.8    
44.0    
44.1    
44.3    
44.5    
44.6    
44.8    
44.9    
45.1    
45.3    
45.4    
45.6    
45.7    
45.9    
46.1    
46.2    
46.4    
46.5    
46.7    
46.9    
47.0    
47.2    
47.4    
47.5    
47.7    
47.8    
48.0    
48.2    
48.3    
48.5    
48.6    
48.8    
49.0    
49.1    
49.3    
49.4    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.6    
50.7    
50.9    
51.0    
51.2    
51.4    
51.5    
51.7    
51.8    
52.0    
52.2    
52.3    
52.5    
52.6    
52.8    
53.0    
53.1    
53.3    
53.5    
53.6    
53.8    
53.9    
54.1    
54.3    
54.4    
54.6    
54.7    
54.9    
55.1    
55.2    
55.4    
55.5    
55.7    
55.9    
56.0    
56.2    
56.3    
56.5    
56.7    
56.8    
57.0    
57.1    
57.3    
57.5    
57.6    
57.8    
57.9    
58.1    
58.3    
58.4    
58.6    
58.7    
58.9    
59.1    
59.2    
59.4    
59.6    
59.7    
59.9    
60.0    
60.2    
60.4    
60.5    
60.7    
60.8    
61.0    
61.2    
61.3    
61.5    
61.6    
61.8    
62.0    
62.1    
62.3    
62.4    
62.6    
62.8    
62.9    
63.1    
63.2    
63.4    
63.6    
63.7    
63.9    
64.0    
64.2    
64.4    
64.5    
64.7    
64.8    
65.0    
65.2    
65.3    
65.5    
65.7    
65.8    
66.0    
66.1    
66.3    
66.5    
66.6    
66.8    
66.9    
67.1    
67.3    
67.4    
67.6    
67.7    
67.9    
68.1    
68.2    
68.4    
68.5    
68.7    
68.9    
69.0    
69.2    
69.3    
69.5    
69.7    
69.8    
70.0    
70.1    
70.3    
70.5    
70.6    
70.8    
70.9    
71.1    
71.3    
71.4    
71.6    
71.7    
71.9    
72.1    
72.2    
72.4    
72.6    
72.7    
72.9    
73.0    
73.2    
73.4    
73.5    
73.7    
73.8    
74.0    
74.2    
74.3    
74.5    
74.6    
74.8    
75.0    
75.1    
75.3    
75.4    
75.6    
75.8    
75.9    
76.1    
76.2    
76.4    
76.6    
76.7    
76.9    
77.0    
77.2    
77.4    
77.5    
77.7    
77.8    
78.0    
78.2    
78.3    
78.5    
78.7    
78.8    
79.0    
79.1    
79.3    
79.5    
79.6    
79.8    
79.9    
80.1    
80.3    
80.4    
80.6    
80.7    
80.9    
81.1    
81.2    
81.4    
81.5    
81.7    
81.9    
82.0    
82.2    
82.3    
82.5    
82.7    
82.8    
83.0    
83.1    
83.3    
83.5    
83.6    
83.8    
83.9    
84.1    
84.3    
84.4    
84.6    
84.8    
84.9    
85.1    
85.2    
85.4    
85.6    
85.7    
85.9    
86.0    
86.2    
86.4    
86.5    
86.7    
86.8    
87.0    
87.2    
87.3    
87.5    
87.6    
87.8    
88.0    
88.1    
88.3    
88.4    
88.6    
88.8    
88.9    
89.1    
89.2    
89.4    
89.6    
89.7    
89.9    
90.0    
90.2    
90.4    
90.5    
90.7    
90.9    
91.0    
91.2    
91.3    
91.5    
91.7    
91.8    
92.0    
92.1    
92.3    
92.5    
92.6    
92.8    
92.9    
93.1    
93.3    
93.4    
93.6    
93.7    
93.9    
94.1    
94.2    
94.4    
94.5    
94.7    
94.9    
95.0    
95.2    
95.3    
95.5    
95.7    
95.8    
96.0    
96.1    
96.3    
96.5    
96.6    
96.8    
97.0    
97.1    
97.3    
97.4    
97.6    
97.8    
97.9    
98.1    
98.2    
98.4    
98.6    
98.7    
98.9    
99.0    
99.2    
99.4    
99.5    
99.7    
99.8    
-found 39 predictions from path traversal
Error with prediction: snap lend_intergenic: 25143, rend_intergenic: 22978  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 38 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 18668
-exon list size: 32


building trellis

2.9    
5.9    
8.8    
11.8    
14.7    
17.6    
20.6    
23.5    
26.5    
29.4    
32.4    
35.3    
38.2    
41.2    
44.1    
47.1    
50.0    
52.9    
55.9    
58.8    
61.8    
64.7    
67.6    
70.6    
73.5    
76.5    
79.4    
82.4    
85.3    
88.2    
91.2    
94.1    
97.1    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1488 - 18668
-exon list size: 26


building trellis

3.6    
7.1    
10.7    
14.3    
17.9    
21.4    
25.0    
28.6    
32.1    
35.7    
39.3    
42.9    
46.4    
50.0    
53.6    
57.1    
60.7    
64.3    
67.9    
71.4    
75.0    
78.6    
82.1    
85.7    
89.3    
92.9    
96.4    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support