-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_797

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g41380.t1
Valid prediction for GeneMark_model.108402_t
Valid prediction for snap_scaffold_797-snap.1-T1
Couldn't classify 4289, 4410
Sorry, prediction snap_scaffold_797-snap.3-T1 fails validation.
(ATG)	 GA	4122-4179	GT	TGG
(TCC)	 AG	4289-4410	GT	GGG
-recovered snap_scaffold_797-snap.3-T1, initial, 4122, 4179
-recovered snap_scaffold_797-snap.3-T1, internal, 4289, 4410

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_797-snap.2-T1
Couldn't classify 4135, 4149
Sorry, prediction GeneMark_model.108401_t fails validation.
(ATG)	 AC	3380-3528	GT	TCG
(GGA)	 AG	3570-3623	GT	GAG
(GGT)	 AG	3666-3722	GT	AGG
(GGG)	 AG	4135-4149	GT	AGG
-recovered GeneMark_model.108401_t, initial, 3380, 3528
-recovered GeneMark_model.108401_t, internal, 3570, 3623
-recovered GeneMark_model.108401_t, internal, 3666, 3722
-recovered GeneMark_model.108401_t, internal, 4135, 4149

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4417
-exon list size: 23


building trellis

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-found 2 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support