-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_782

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g41369.t1
Couldn't classify 2863, 3151
Sorry, prediction GeneMark_model.108372_t fails validation.
(CAC)	 AG	2863-3151	GT	GGG
(GCT)	 AG	3505-3517	GT	CCG
(GGA)	 AG	3666-3753	GA	GAG
-recovered GeneMark_model.108372_t, terminal, 3666, 3753
-recovered GeneMark_model.108372_t, internal, 2863, 3151
-recovered GeneMark_model.108372_t, internal, 3505, 3517
Couldn't classify 2863, 3151
Sorry, prediction snap_scaffold_782-snap.1-T1 fails validation.
(CAC)	 AG	2863-3151	GT	GGG
-recovered snap_scaffold_782-snap.1-T1, internal, 2863, 3151
Valid prediction for GlimmerHMM_glimmerT_62231-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4485
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support