-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_767

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 405, 466
Sorry, prediction GeneMark_model.108340_t fails validation.
(CAG)	 AG	405-466	GT	CTG
(AGG)	 AG	815-835	GT	GGG
(GTG)	 AG	861-884	GT	GGG
(GGT)	 AG	905-982	GT	GGG
(GGG)	 AG	1004-1048	GT	GGG
(TTC)	 AG	1090-1122	GT	AAG
(GGA)	 AG	1177-1188	GT	AAG
(TGA)	 AG	1210-1297	GA	GAG
-recovered GeneMark_model.108340_t, terminal, 1210, 1297
-recovered GeneMark_model.108340_t, internal, 405, 466
-recovered GeneMark_model.108340_t, internal, 815, 835
-recovered GeneMark_model.108340_t, internal, 861, 884
-recovered GeneMark_model.108340_t, internal, 905, 982
-recovered GeneMark_model.108340_t, internal, 1004, 1048
-recovered GeneMark_model.108340_t, internal, 1090, 1122
-recovered GeneMark_model.108340_t, internal, 1177, 1188

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4594
-exon list size: 18


building trellis

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-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support