-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_751

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 176, 241
Sorry, prediction GeneMark_model.108310_t fails validation.
(GGA)	 AG	176-241	GC	GAG
(GGG)	 AG	266-353	GC	AAG
-recovered GeneMark_model.108310_t, terminal, 266, 353
-recovered GeneMark_model.108310_t, internal, 176, 241
-recovered GeneMark_model.108310_t, internal, 266, 353
Valid prediction for GeneMark_model.108312_t
Valid prediction for snap_scaffold_751-snap.1-T1
add_exon() Sorry, snap_scaffold_751-snap.1-T1 101-353-terminal-1 is invalid.
Valid prediction for GeneMark_model.108311_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_62199-T1
add_exon() Sorry, GlimmerHMM_glimmerT_62199-T1 100-305-terminal-1 is invalid.
Valid prediction for GeneMark_model.108313_t
add_exon() Sorry, GeneMark_model.108313_t 100-305-terminal-1 is invalid.
Valid prediction for snap_scaffold_751-snap.2-T1
add_exon() Sorry, snap_scaffold_751-snap.2-T1 100-305-terminal-1 is invalid.
Valid prediction for Augustus_model.g41346.t1
add_exon() Sorry, Augustus_model.g41346.t1 100-305-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4675
-exon list size: 18


building trellis

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25.0    
30.0    
35.0    
40.0    
45.0    
50.0    
55.0    
60.0    
65.0    
70.0    
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85.0    
90.0    
95.0    
-found 2 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support