-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_7/scaffold_7_7777816-8121350

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g12189.t1
Valid prediction for GeneMark_model.30451_t
Valid prediction for GlimmerHMM_glimmerT_18152-T1
Valid prediction for GlimmerHMM_glimmerT_18140-T1
Couldn't classify 65916, 66890
Sorry, prediction pasa_asmbl_50828.p1 fails validation.
(CGA)	 CC	65916-66890	AG	AAA
Valid prediction for GeneMark_model.30459_t
Valid prediction for Augustus_model.g12192.t1
Valid prediction for Augustus_model.g12207.t1
Valid prediction for snap_scaffold_7-snap.1592-T1
Valid prediction for snap_scaffold_7-snap.1595-T1
Valid prediction for GlimmerHMM_glimmerT_18156-T1
Valid prediction for snap_scaffold_7-snap.1627-T1
Valid prediction for snap_scaffold_7-snap.1589-T1
Valid prediction for GeneMark_model.30437_t
Valid prediction for GlimmerHMM_glimmerT_18160-T1
Valid prediction for snap_scaffold_7-snap.1602-T1
Valid prediction for snap_scaffold_7-snap.1631-T1
Valid prediction for snap_scaffold_7-snap.1618-T1
Valid prediction for Augustus_model.g12206.t1
Valid prediction for GlimmerHMM_glimmerT_18155-T1
Valid prediction for GeneMark_model.30471_t
Valid prediction for GeneMark_model.30438_t
Valid prediction for snap_scaffold_7-snap.1600-T1
Valid prediction for snap_scaffold_7-snap.1590-T1
Valid prediction for Augustus_model.g12205.t1
Valid prediction for GeneMark_model.30454_t
Couldn't classify 280999, 281040
Couldn't classify 286115, 286180
Sorry, prediction pasa_asmbl_50835.p1 fails validation.
(CTC)	 TA	280999-281040	GT	AGG
(ATG)	 AG	281230-281424	GT	AGG
(AAT)	 AG	281569-281761	GT	AGG
(ACC)	 AG	281876-282004	GT	AGG
(CTG)	 AG	282199-282287	GT	AGG
(CTG)	 AG	282445-282647	GT	AAG
(CAC)	 AG	282891-283014	GT	ATG
(AAA)	 AG	283713-283838	GT	AGG
(CAA)	 AG	286115-286180	AT	ACA
-recovered pasa_asmbl_50835.p1, initial, 281230, 281424
-recovered pasa_asmbl_50835.p1, internal, 281230, 281424
-recovered pasa_asmbl_50835.p1, internal, 281569, 281761
-recovered pasa_asmbl_50835.p1, internal, 281876, 282004
-recovered pasa_asmbl_50835.p1, internal, 282199, 282287
-recovered pasa_asmbl_50835.p1, internal, 282445, 282647
-recovered pasa_asmbl_50835.p1, internal, 282891, 283014
-recovered pasa_asmbl_50835.p1, internal, 283713, 283838
Valid prediction for pasa_asmbl_50837.p1
Valid prediction for GlimmerHMM_glimmerT_18148-T1
Valid prediction for Augustus_model.g12202.t1
Valid prediction for GlimmerHMM_glimmerT_18159-T1
Valid prediction for snap_scaffold_7-snap.1632-T1
Valid prediction for GeneMark_model.30450_t
Couldn't classify 295744, 296091
Sorry, prediction pasa_asmbl_50838.p1 fails validation.
(CTC)	 AA	295744-296091	AG	AAA
Valid prediction for GlimmerHMM_glimmerT_18138-T1
Valid prediction for GlimmerHMM_glimmerT_18157-T1
Valid prediction for Augustus_model.g12191.t1
Couldn't classify 203886, 203991
Couldn't classify 204219, 204442
Sorry, prediction pasa_asmbl_51494.p1 fails validation.
(GGT)	 CA	203886-203991	GT	AGG
(GTG)	 AG	204219-204442	GG	GAG
Valid prediction for GeneMark_model.30448_t
Couldn't classify 207843, 208292
Sorry, prediction pasa_asmbl_50829.p1 fails validation.
(CCC)	 AC	207843-208292	AC	AGA
Valid prediction for snap_scaffold_7-snap.1594-T1
Valid prediction for snap_scaffold_7-snap.1612-T1
Valid prediction for snap_scaffold_7-snap.1621-T1
Valid prediction for GeneMark_model.30452_t
Valid prediction for GlimmerHMM_glimmerT_18153-T1
Valid prediction for GeneMark_model.30466_t
Valid prediction for GeneMark_model.30434_t
Valid prediction for snap_scaffold_7-snap.1611-T1
Valid prediction for Augustus_model.g12198.t1
Couldn't classify 273297, 273413
Sorry, prediction pasa_asmbl_50833.p1 fails validation.
(GCT)	 AT	273297-273413	GT	AGG
(GTC)	 AG	273611-273719	GT	CGG
(AGC)	 AG	274202-274262	GT	AGG
(ACT)	 AG	276987-277041	GT	AGG
(ATC)	 AG	277566-277673	TT	GAT
-recovered pasa_asmbl_50833.p1, terminal, 277566, 277673
-recovered pasa_asmbl_50833.p1, internal, 273611, 273719
-recovered pasa_asmbl_50833.p1, internal, 274202, 274262
-recovered pasa_asmbl_50833.p1, internal, 276987, 277041
Valid prediction for snap_scaffold_7-snap.1613-T1
Valid prediction for GeneMark_model.30465_t
Valid prediction for snap_scaffold_7-snap.1620-T1
Valid prediction for snap_scaffold_7-snap.1601-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for snap_scaffold_7-snap.1624-T1
Valid prediction for GeneMark_model.30463_t
Valid prediction for snap_scaffold_7-snap.1619-T1
Valid prediction for GeneMark_model.30456_t
Valid prediction for Augustus_model.g12188.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_7-snap.1607-T1
Valid prediction for Augustus_model.g12209.t1
Valid prediction for HiQ_model.g12200.t1
Couldn't classify 338633, 338704
Sorry, prediction pasa_asmbl_49783.p1 fails validation.
(GAC)	 GT	338633-338704	GT	CTG
(GAT)	 AG	339000-339095	GT	TTG
(TGG)	 AG	339465-339560	GT	AGG
(GAC)	 AG	339837-339968	GT	AGG
(GAA)	 AG	340188-340385	GA	GAG
-recovered pasa_asmbl_49783.p1, terminal, 340188, 340385
-recovered pasa_asmbl_49783.p1, internal, 339000, 339095
-recovered pasa_asmbl_49783.p1, internal, 339465, 339560
-recovered pasa_asmbl_49783.p1, internal, 339837, 339968
Valid prediction for snap_scaffold_7-snap.1604-T1
Valid prediction for snap_scaffold_7-snap.1605-T1
Valid prediction for Augustus_model.g12197.t1
Valid prediction for snap_scaffold_7-snap.1609-T1
Valid prediction for snap_scaffold_7-snap.1593-T1
Valid prediction for pasa_asmbl_49796.p1
Couldn't classify 333084, 333104
Sorry, prediction pasa_asmbl_49786.p1 fails validation.
(GGT)	 CT	333084-333104	GC	TGG
(GTG)	 AG	333359-333374	GT	AGG
(CCA)	 AG	333551-333618	GT	AGG
(GGG)	 AG	333757-333861	GT	AGG
(GGT)	 AG	334001-334105	TT	GAT
-recovered pasa_asmbl_49786.p1, terminal, 334001, 334105
-recovered pasa_asmbl_49786.p1, internal, 333359, 333374
-recovered pasa_asmbl_49786.p1, internal, 333551, 333618
-recovered pasa_asmbl_49786.p1, internal, 333757, 333861
Valid prediction for snap_scaffold_7-snap.1610-T1
Valid prediction for GlimmerHMM_glimmerT_18147-T1
Valid prediction for GlimmerHMM_glimmerT_18142-T1
Valid prediction for snap_scaffold_7-snap.1625-T1
Valid prediction for snap_scaffold_7-snap.1617-T1
Couldn't classify 333359, 333373
Sorry, prediction pasa_asmbl_49791.p1 fails validation.
(ATG)	 CC	331568-331676	GT	AGG
(AGA)	 AG	331929-332067	GT	GGG
(GAT)	 AG	332260-332416	GT	AGG
(GAA)	 AG	332526-332571	GT	TGG
(GCC)	 AG	332775-332813	GT	GGG
(GAG)	 AG	333016-333104	GC	TGG
(GTG)	 AG	333359-333373	GG	CAG
-recovered pasa_asmbl_49791.p1, initial, 331568, 331676
-recovered pasa_asmbl_49791.p1, internal, 331929, 332067
-recovered pasa_asmbl_49791.p1, internal, 332260, 332416
-recovered pasa_asmbl_49791.p1, internal, 332526, 332571
-recovered pasa_asmbl_49791.p1, internal, 332775, 332813
-recovered pasa_asmbl_49791.p1, internal, 333016, 333104
Valid prediction for snap_scaffold_7-snap.1626-T1
Valid prediction for Augustus_model.g12196.t1
Valid prediction for GeneMark_model.30462_t
Valid prediction for CodingQuarry_transcript_57403-T1
Valid prediction for GeneMark_model.30468_t
Valid prediction for GeneMark_model.30467_t
Valid prediction for GeneMark_model.30461_t
Valid prediction for Augustus_model.g12201.t1
Valid prediction for GeneMark_model.30449_t
Valid prediction for GlimmerHMM_glimmerT_18158-T1
Valid prediction for snap_scaffold_7-snap.1629-T1
Valid prediction for HiQ_model.g12204.t1
Valid prediction for snap_scaffold_7-snap.1608-T1
Valid prediction for GeneMark_model.30445_t
Valid prediction for snap_scaffold_7-snap.1596-T1
Valid prediction for Augustus_model.g12186.t1
Valid prediction for Augustus_model.g12185.t1
Couldn't classify 109542, 109671
Sorry, prediction pasa_asmbl_49795.p1 fails validation.
(CAG)	 TG	109542-109671	GT	CGG
(ACA)	 AG	112268-112473	GT	GGG
(GTA)	 AG	114956-115522	AG	GAA
-recovered pasa_asmbl_49795.p1, terminal, 114956, 115522
-recovered pasa_asmbl_49795.p1, internal, 112268, 112473
Valid prediction for snap_scaffold_7-snap.1615-T1
Valid prediction for GeneMark_model.30439_t
Valid prediction for GeneMark_model.30469_t
Valid prediction for GeneMark_model.30436_t
Valid prediction for GlimmerHMM_glimmerT_18150-T1
Valid prediction for snap_scaffold_7-snap.1606-T1
Valid prediction for snap_scaffold_7-snap.1630-T1
Valid prediction for GlimmerHMM_glimmerT_18146-T1
Valid prediction for snap_scaffold_7-snap.1616-T1
Valid prediction for GlimmerHMM_glimmerT_18141-T1
Valid prediction for snap_scaffold_7-snap.1628-T1
Valid prediction for snap_scaffold_7-snap.1622-T1
Valid prediction for Augustus_model.g12199.t1
Valid prediction for snap_scaffold_7-snap.1598-T1
Valid prediction for snap_scaffold_7-snap.1586-T1
Valid prediction for GeneMark_model.30464_t
Valid prediction for GeneMark_model.30446_t
Valid prediction for GeneMark_model.30455_t
Valid prediction for GeneMark_model.30435_t
Valid prediction for snap_scaffold_7-snap.1599-T1
Valid prediction for GlimmerHMM_glimmerT_18151-T1
Valid prediction for GeneMark_model.30457_t
Valid prediction for snap_scaffold_7-snap.1623-T1
Valid prediction for GlimmerHMM_glimmerT_18144-T1
Valid prediction for Augustus_model.g12203.t1
Valid prediction for GlimmerHMM_glimmerT_18139-T1
Valid prediction for GeneMark_model.30443_t
Valid prediction for snap_scaffold_7-snap.1587-T1
Valid prediction for GlimmerHMM_glimmerT_18137-T1
Valid prediction for Augustus_model.g12190.t1
Valid prediction for snap_scaffold_7-snap.1588-T1
Valid prediction for Augustus_model.g12187.t1
Couldn't classify 191956, 192009
Sorry, prediction pasa_asmbl_49792.p1 fails validation.
(TAC)	 CA	191956-192009	GT	AGG
(TTT)	 AG	192164-192262	GT	AGG
(GTG)	 AG	192581-192674	GT	TGG
(GGC)	 AG	193358-193435	GT	GGG
(GTC)	 AG	194150-194289	GT	AGG
(ATT)	 AG	196326-196427	GT	GGG
(GTC)	 AG	197285-197382	GT	ACG
(AAT)	 AG	197580-197703	GT	AGG
(GTG)	 AG	198991-199141	GT	CGG
(ACA)	 AG	199408-199490	GT	AGG
(ATC)	 AG	199583-199687	GT	TGG
(TAT)	 AG	199844-199973	GT	GGG
(GTC)	 AG	201193-201335	GA	AAG
-recovered pasa_asmbl_49792.p1, terminal, 201193, 201335
-recovered pasa_asmbl_49792.p1, internal, 192164, 192262
-recovered pasa_asmbl_49792.p1, internal, 192581, 192674
-recovered pasa_asmbl_49792.p1, internal, 193358, 193435
-recovered pasa_asmbl_49792.p1, internal, 194150, 194289
-recovered pasa_asmbl_49792.p1, internal, 196326, 196427
-recovered pasa_asmbl_49792.p1, internal, 197285, 197382
-recovered pasa_asmbl_49792.p1, internal, 197580, 197703
-recovered pasa_asmbl_49792.p1, internal, 198991, 199141
-recovered pasa_asmbl_49792.p1, internal, 199408, 199490
-recovered pasa_asmbl_49792.p1, internal, 199583, 199687
-recovered pasa_asmbl_49792.p1, internal, 199844, 199973
Valid prediction for snap_scaffold_7-snap.1597-T1
Valid prediction for GeneMark_model.30453_t
Valid prediction for snap_scaffold_7-snap.1591-T1
Valid prediction for snap_scaffold_7-snap.1603-T1
Valid prediction for Augustus_model.g12194.t1
Valid prediction for snap_scaffold_7-snap.1614-T1
Valid prediction for GeneMark_model.30444_t
Valid prediction for GeneMark_model.30432_t
Valid prediction for CodingQuarry_transcript_57402-T1
Valid prediction for GeneMark_model.30458_t
Valid prediction for GeneMark_model.30447_t
Valid prediction for Augustus_model.g12193.t1
Valid prediction for GlimmerHMM_glimmerT_18145-T1
Valid prediction for GeneMark_model.30442_t
Valid prediction for GlimmerHMM_glimmerT_18149-T1
Valid prediction for GeneMark_model.30433_t
Valid prediction for GeneMark_model.30470_t
Valid prediction for HiQ_model.g12208.t1
Valid prediction for GeneMark_model.30460_t
Valid prediction for GlimmerHMM_glimmerT_18154-T1
Valid prediction for Augustus_model.g12195.t1
Valid prediction for GlimmerHMM_glimmerT_18143-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 270339, rend_intergenic: 260189  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 272508, rend_intergenic: 270354  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 285855, rend_intergenic: 273102  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 286669, rend_intergenic: 285991  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 296091, rend_intergenic: 287871  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 343535
-exon list size: 586


building trellis

0.2    
0.3    
0.5    
0.7    
0.9    
1.0    
1.2    
1.4    
1.5    
1.7    
1.9    
2.0    
2.2    
2.4    
2.6    
2.7    
2.9    
3.1    
3.2    
3.4    
3.6    
3.7    
3.9    
4.1    
4.3    
4.4    
4.6    
4.8    
4.9    
5.1    
5.3    
5.4    
5.6    
5.8    
6.0    
6.1    
6.3    
6.5    
6.6    
6.8    
7.0    
7.1    
7.3    
7.5    
7.7    
7.8    
8.0    
8.2    
8.3    
8.5    
8.7    
8.8    
9.0    
9.2    
9.4    
9.5    
9.7    
9.9    
10.0    
10.2    
10.4    
10.5    
10.7    
10.9    
11.1    
11.2    
11.4    
11.6    
11.7    
11.9    
12.1    
12.2    
12.4    
12.6    
12.8    
12.9    
13.1    
13.3    
13.4    
13.6    
13.8    
13.9    
14.1    
14.3    
14.5    
14.6    
14.8    
15.0    
15.1    
15.3    
15.5    
15.6    
15.8    
16.0    
16.2    
16.3    
16.5    
16.7    
16.8    
17.0    
17.2    
17.3    
17.5    
17.7    
17.9    
18.0    
18.2    
18.4    
18.5    
18.7    
18.9    
19.0    
19.2    
19.4    
19.6    
19.7    
19.9    
20.1    
20.2    
20.4    
20.6    
20.7    
20.9    
21.1    
21.3    
21.4    
21.6    
21.8    
21.9    
22.1    
22.3    
22.4    
22.6    
22.8    
23.0    
23.1    
23.3    
23.5    
23.6    
23.8    
24.0    
24.1    
24.3    
24.5    
24.7    
24.8    
25.0    
25.2    
25.3    
25.5    
25.7    
25.9    
26.0    
26.2    
26.4    
26.5    
26.7    
26.9    
27.0    
27.2    
27.4    
27.6    
27.7    
27.9    
28.1    
28.2    
28.4    
28.6    
28.7    
28.9    
29.1    
29.3    
29.4    
29.6    
29.8    
29.9    
30.1    
30.3    
30.4    
30.6    
30.8    
31.0    
31.1    
31.3    
31.5    
31.6    
31.8    
32.0    
32.1    
32.3    
32.5    
32.7    
32.8    
33.0    
33.2    
33.3    
33.5    
33.7    
33.8    
34.0    
34.2    
34.4    
34.5    
34.7    
34.9    
35.0    
35.2    
35.4    
35.5    
35.7    
35.9    
36.1    
36.2    
36.4    
36.6    
36.7    
36.9    
37.1    
37.2    
37.4    
37.6    
37.8    
37.9    
38.1    
38.3    
38.4    
38.6    
38.8    
38.9    
39.1    
39.3    
39.5    
39.6    
39.8    
40.0    
40.1    
40.3    
40.5    
40.6    
40.8    
41.0    
41.2    
41.3    
41.5    
41.7    
41.8    
42.0    
42.2    
42.3    
42.5    
42.7    
42.9    
43.0    
43.2    
43.4    
43.5    
43.7    
43.9    
44.0    
44.2    
44.4    
44.6    
44.7    
44.9    
45.1    
45.2    
45.4    
45.6    
45.7    
45.9    
46.1    
46.3    
46.4    
46.6    
46.8    
46.9    
47.1    
47.3    
47.4    
47.6    
47.8    
48.0    
48.1    
48.3    
48.5    
48.6    
48.8    
49.0    
49.1    
49.3    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.7    
50.9    
51.0    
51.2    
51.4    
51.5    
51.7    
51.9    
52.0    
52.2    
52.4    
52.6    
52.7    
52.9    
53.1    
53.2    
53.4    
53.6    
53.7    
53.9    
54.1    
54.3    
54.4    
54.6    
54.8    
54.9    
55.1    
55.3    
55.4    
55.6    
55.8    
56.0    
56.1    
56.3    
56.5    
56.6    
56.8    
57.0    
57.1    
57.3    
57.5    
57.7    
57.8    
58.0    
58.2    
58.3    
58.5    
58.7    
58.8    
59.0    
59.2    
59.4    
59.5    
59.7    
59.9    
60.0    
60.2    
60.4    
60.5    
60.7    
60.9    
61.1    
61.2    
61.4    
61.6    
61.7    
61.9    
62.1    
62.2    
62.4    
62.6    
62.8    
62.9    
63.1    
63.3    
63.4    
63.6    
63.8    
63.9    
64.1    
64.3    
64.5    
64.6    
64.8    
65.0    
65.1    
65.3    
65.5    
65.6    
65.8    
66.0    
66.2    
66.3    
66.5    
66.7    
66.8    
67.0    
67.2    
67.3    
67.5    
67.7    
67.9    
68.0    
68.2    
68.4    
68.5    
68.7    
68.9    
69.0    
69.2    
69.4    
69.6    
69.7    
69.9    
70.1    
70.2    
70.4    
70.6    
70.7    
70.9    
71.1    
71.3    
71.4    
71.6    
71.8    
71.9    
72.1    
72.3    
72.4    
72.6    
72.8    
73.0    
73.1    
73.3    
73.5    
73.6    
73.8    
74.0    
74.1    
74.3    
74.5    
74.7    
74.8    
75.0    
75.2    
75.3    
75.5    
75.7    
75.9    
76.0    
76.2    
76.4    
76.5    
76.7    
76.9    
77.0    
77.2    
77.4    
77.6    
77.7    
77.9    
78.1    
78.2    
78.4    
78.6    
78.7    
78.9    
79.1    
79.3    
79.4    
79.6    
79.8    
79.9    
80.1    
80.3    
80.4    
80.6    
80.8    
81.0    
81.1    
81.3    
81.5    
81.6    
81.8    
82.0    
82.1    
82.3    
82.5    
82.7    
82.8    
83.0    
83.2    
83.3    
83.5    
83.7    
83.8    
84.0    
84.2    
84.4    
84.5    
84.7    
84.9    
85.0    
85.2    
85.4    
85.5    
85.7    
85.9    
86.1    
86.2    
86.4    
86.6    
86.7    
86.9    
87.1    
87.2    
87.4    
87.6    
87.8    
87.9    
88.1    
88.3    
88.4    
88.6    
88.8    
88.9    
89.1    
89.3    
89.5    
89.6    
89.8    
90.0    
90.1    
90.3    
90.5    
90.6    
90.8    
91.0    
91.2    
91.3    
91.5    
91.7    
91.8    
92.0    
92.2    
92.3    
92.5    
92.7    
92.9    
93.0    
93.2    
93.4    
93.5    
93.7    
93.9    
94.0    
94.2    
94.4    
94.6    
94.7    
94.9    
95.1    
95.2    
95.4    
95.6    
95.7    
95.9    
96.1    
96.3    
96.4    
96.6    
96.8    
96.9    
97.1    
97.3    
97.4    
97.6    
97.8    
98.0    
98.1    
98.3    
98.5    
98.6    
98.8    
99.0    
99.1    
99.3    
99.5    
99.7    
99.8    
-found 34 predictions from path traversal
Error with prediction: snap lend_intergenic: 270339, rend_intergenic: 260189  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 272508, rend_intergenic: 270354  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 285855, rend_intergenic: 273102  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 286669, rend_intergenic: 285991  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 296091, rend_intergenic: 287871  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 28 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 325612 - 343535
-exon list size: 3


building trellis

20.0    
40.0    
60.0    
80.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 331556 - 343535
-exon list size: 2


building trellis

25.0    
50.0    
75.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 331556 - 341849
-exon list size: 1


building trellis

33.3    
66.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support