-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_7/scaffold_7_7526921-7779909

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.30392_t
Valid prediction for GlimmerHMM_glimmerT_18110-T1
Valid prediction for GlimmerHMM_glimmerT_18132-T1
Valid prediction for snap_scaffold_7-snap.1582-T1
Valid prediction for GeneMark_model.30424_t
Valid prediction for snap_scaffold_7-snap.1555-T1
Valid prediction for snap_scaffold_7-snap.1546-T1
Valid prediction for snap_scaffold_7-snap.1564-T1
Valid prediction for GeneMark_model.30399_t
Valid prediction for snap_scaffold_7-snap.1562-T1
Valid prediction for snap_scaffold_7-snap.1574-T1
Valid prediction for GeneMark_model.30393_t
Valid prediction for GeneMark_model.30403_t
Valid prediction for GeneMark_model.30388_t
Valid prediction for GeneMark_model.30384_t
Valid prediction for GlimmerHMM_glimmerT_18103-T1
Valid prediction for snap_scaffold_7-snap.1553-T1
Valid prediction for GeneMark_model.30380_t
Valid prediction for GeneMark_model.30426_t
Valid prediction for GeneMark_model.30406_t
Valid prediction for GlimmerHMM_glimmerT_18119-T1
Valid prediction for GeneMark_model.30396_t
Valid prediction for GlimmerHMM_glimmerT_18134-T1
Valid prediction for GlimmerHMM_glimmerT_18133-T1
Valid prediction for GeneMark_model.30411_t
Valid prediction for GeneMark_model.30385_t
Valid prediction for snap_scaffold_7-snap.1559-T1
Valid prediction for GeneMark_model.30417_t
Valid prediction for GlimmerHMM_glimmerT_18105-T1
Valid prediction for GeneMark_model.30379_t
Valid prediction for Augustus_model.g12179.t1
Valid prediction for Augustus_model.g12181.t1
Valid prediction for snap_scaffold_7-snap.1550-T1
Valid prediction for snap_scaffold_7-snap.1576-T1
Valid prediction for GeneMark_model.30428_t
Valid prediction for GeneMark_model.30422_t
Valid prediction for Augustus_model.g12168.t1
Valid prediction for GeneMark_model.30390_t
Valid prediction for snap_scaffold_7-snap.1549-T1
Valid prediction for snap_scaffold_7-snap.1583-T1
Valid prediction for GeneMark_model.30429_t
Valid prediction for snap_scaffold_7-snap.1584-T1
Valid prediction for GlimmerHMM_glimmerT_18136-T1
Valid prediction for snap_scaffold_7-snap.1585-T1
Valid prediction for GlimmerHMM_glimmerT_18111-T1
Valid prediction for GlimmerHMM_glimmerT_18135-T1
Valid prediction for GeneMark_model.30419_t
Valid prediction for HiQ_model.g12183.t1
Valid prediction for snap_scaffold_7-snap.1568-T1
Valid prediction for GeneMark_model.30381_t
Valid prediction for CodingQuarry_transcript_57401-T1
Valid prediction for Augustus_model.g12164.t1
Valid prediction for GeneMark_model.30374_t
Valid prediction for GeneMark_model.30387_t
Valid prediction for Augustus_model.g12182.t1
Couldn't classify 243363, 243531
Sorry, prediction pasa_asmbl_50822.p1 fails validation.
(AAT)	 AA	243363-243531	GT	AGG
(GAT)	 AG	243728-243841	GT	AAG
(AGT)	 AG	244039-244148	CA	AGC
-recovered pasa_asmbl_50822.p1, terminal, 244039, 244148
-recovered pasa_asmbl_50822.p1, internal, 243728, 243841
Valid prediction for GlimmerHMM_glimmerT_18118-T1
Valid prediction for GlimmerHMM_glimmerT_18108-T1
Valid prediction for GeneMark_model.30383_t
Valid prediction for GeneMark_model.30378_t
Valid prediction for GeneMark_model.30398_t
Valid prediction for snap_scaffold_7-snap.1548-T1
Valid prediction for GlimmerHMM_glimmerT_18107-T1
Valid prediction for GeneMark_model.30431_t
Couldn't classify 248793, 249051
Couldn't classify 249211, 249305
Sorry, prediction pasa_asmbl_50824.p1 fails validation.
(AAA)	 TC	248793-249051	GT	AGG
(AGG)	 AG	249211-249305	GC	AGG
-recovered pasa_asmbl_50824.p1, internal, 249211, 249305
Valid prediction for GeneMark_model.30414_t
Valid prediction for GeneMark_model.30408_t
Valid prediction for GeneMark_model.30401_t
Valid prediction for Augustus_model.g12169.t1
Valid prediction for Augustus_model.g12184.t1
Valid prediction for snap_scaffold_7-snap.1579-T1
Valid prediction for GeneMark_model.30372_t
Valid prediction for snap_scaffold_7-snap.1581-T1
Valid prediction for GeneMark_model.30376_t
Valid prediction for GlimmerHMM_glimmerT_18113-T1
Valid prediction for GlimmerHMM_glimmerT_18129-T1
Couldn't classify 247257, 247505
Couldn't classify 247734, 248198
Sorry, prediction pasa_asmbl_50823.p1 fails validation.
(AGA)	 GT	247257-247505	GT	AGG
(GAA)	 AG	247734-248198	CC	CCC

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_18115-T1
Valid prediction for GlimmerHMM_glimmerT_18128-T1
Valid prediction for snap_scaffold_7-snap.1561-T1
Valid prediction for snap_scaffold_7-snap.1580-T1
Valid prediction for snap_scaffold_7-snap.1554-T1
Valid prediction for GeneMark_model.30386_t
Valid prediction for GeneMark_model.30404_t
Valid prediction for GlimmerHMM_glimmerT_18114-T1
Valid prediction for pasa_asmbl_49777.p1
Valid prediction for GeneMark_model.30416_t
Valid prediction for GlimmerHMM_glimmerT_18127-T1
Valid prediction for snap_scaffold_7-snap.1573-T1
Valid prediction for snap_scaffold_7-snap.1545-T1
Valid prediction for GeneMark_model.30391_t
Couldn't classify 163740, 163866
Sorry, prediction pasa_asmbl_49766.p1 fails validation.
(TCC)	 CC	163740-163866	GT	AGG
(CAG)	 AG	164008-164160	GT	GGG
(GTA)	 AG	164462-164684	GT	AGG
(GTA)	 AG	164876-165165	GT	CGG
(GCC)	 AG	165433-165656	GT	AGG
(GAC)	 AG	165797-166294	GT	AGG
(GGA)	 AG	167604-167781	GT	AGG
(GAG)	 AG	168443-168646	GT	TGG
(GCA)	 AG	168846-168965	GT	AGG
(GTG)	 AG	169544-169722	GT	AGG
(TAC)	 AG	171256-171459	CT	GAC
add_exon() Sorry, pasa_asmbl_49766.p1 168846-168965-terminal-1 is invalid.
-recovered pasa_asmbl_49766.p1, terminal, 168846, 168965
-recovered pasa_asmbl_49766.p1, terminal, 171256, 171459
-recovered pasa_asmbl_49766.p1, internal, 164008, 164160
-recovered pasa_asmbl_49766.p1, internal, 164462, 164684
-recovered pasa_asmbl_49766.p1, internal, 164876, 165165
-recovered pasa_asmbl_49766.p1, internal, 165433, 165656
-recovered pasa_asmbl_49766.p1, internal, 165797, 166294
-recovered pasa_asmbl_49766.p1, internal, 167604, 167781
-recovered pasa_asmbl_49766.p1, internal, 168443, 168646
-recovered pasa_asmbl_49766.p1, internal, 168846, 168965
-recovered pasa_asmbl_49766.p1, internal, 169544, 169722
Valid prediction for GeneMark_model.30375_t
Valid prediction for Augustus_model.g12163.t1
Valid prediction for GlimmerHMM_glimmerT_18120-T1
Valid prediction for snap_scaffold_7-snap.1563-T1
Valid prediction for GlimmerHMM_glimmerT_18123-T1
Valid prediction for Augustus_model.g12178.t1
Valid prediction for GlimmerHMM_glimmerT_18125-T1
Couldn't classify 160668, 161009
Sorry, prediction pasa_asmbl_49769.p1 fails validation.
(ACC)	 TC	160668-161009	GG	GGG
Valid prediction for snap_scaffold_7-snap.1556-T1
Valid prediction for GeneMark_model.30409_t
Valid prediction for Augustus_model.g12167.t1
Valid prediction for Augustus_model.g12166.t1
Valid prediction for snap_scaffold_7-snap.1544-T1
Valid prediction for GlimmerHMM_glimmerT_18126-T1
Valid prediction for GlimmerHMM_glimmerT_18109-T1
Valid prediction for GeneMark_model.30415_t
Valid prediction for CodingQuarry_transcript_57399-T1
Valid prediction for Augustus_model.g12171.t1
Valid prediction for GeneMark_model.30425_t
Valid prediction for GeneMark_model.30382_t
Valid prediction for snap_scaffold_7-snap.1557-T1
Valid prediction for CodingQuarry_transcript_57400-T1
Valid prediction for snap_scaffold_7-snap.1572-T1
Valid prediction for GeneMark_model.30400_t
Valid prediction for CodingQuarry_transcript_57398-T1
Valid prediction for GeneMark_model.30389_t
Valid prediction for GeneMark_model.30410_t
Valid prediction for snap_scaffold_7-snap.1547-T1
Valid prediction for GlimmerHMM_glimmerT_18116-T1
Valid prediction for snap_scaffold_7-snap.1569-T1
Valid prediction for snap_scaffold_7-snap.1566-T1
Valid prediction for GlimmerHMM_glimmerT_18121-T1
Valid prediction for GeneMark_model.30420_t
Valid prediction for Augustus_model.g12175.t1
Couldn't classify 62846, 63034
Couldn't classify 65090, 65134
Sorry, prediction pasa_asmbl_50394.p1 fails validation.
(GCT)	 CA	62846-63034	GT	CTG
(ATT)	 AG	64754-64864	GT	GGG
(TGT)	 AG	65090-65134	GG	GGG
-recovered pasa_asmbl_50394.p1, internal, 64754, 64864
Valid prediction for GeneMark_model.30371_t
Valid prediction for HiQ_model.g12177.t1
Valid prediction for GeneMark_model.30407_t
Valid prediction for Augustus_model.g12176.t1
Valid prediction for GlimmerHMM_glimmerT_18104-T1
Valid prediction for Augustus_model.g12180.t1
Valid prediction for GeneMark_model.30413_t
Valid prediction for snap_scaffold_7-snap.1570-T1
Valid prediction for Augustus_model.g12172.t1
Valid prediction for Augustus_model.g12165.t1
Valid prediction for snap_scaffold_7-snap.1577-T1
Valid prediction for HiQ_model.g12173.t1
Valid prediction for snap_scaffold_7-snap.1558-T1
Valid prediction for GlimmerHMM_glimmerT_18124-T1
Valid prediction for GeneMark_model.30423_t
Couldn't classify 161094, 161792
Couldn't classify 163542, 163664
Sorry, prediction pasa_asmbl_50388.p1 fails validation.
(GCC)	 AC	161094-161792	GT	AGG
(GTG)	 AG	161906-162037	GT	AGG
(GGT)	 AG	162140-162319	GT	AGG
(GTG)	 AG	162488-162671	GT	AGG
(GTA)	 AG	163267-163391	GT	AGG
(ATC)	 AG	163542-163664	GC	GGG
-recovered pasa_asmbl_50388.p1, internal, 161906, 162037
-recovered pasa_asmbl_50388.p1, internal, 162140, 162319
-recovered pasa_asmbl_50388.p1, internal, 162488, 162671
-recovered pasa_asmbl_50388.p1, internal, 163267, 163391
-recovered pasa_asmbl_50388.p1, internal, 163542, 163664
Valid prediction for GlimmerHMM_glimmerT_18131-T1
Valid prediction for snap_scaffold_7-snap.1567-T1
Valid prediction for GeneMark_model.30418_t
Valid prediction for snap_scaffold_7-snap.1552-T1
Valid prediction for GlimmerHMM_glimmerT_18130-T1
Couldn't classify 157572, 157679
Couldn't classify 160502, 160568
Sorry, prediction pasa_asmbl_49770.p1 fails validation.
(GCC)	 AG	157572-157679	GT	AGG
(ATC)	 AG	158515-158596	GT	AGG
(ACC)	 AG	158841-158961	GT	AGG
(TGA)	 AG	159304-159505	GT	AGG
(ATC)	 AG	159604-159779	GT	AGG
(GCG)	 AG	160502-160568	CA	GGC
-recovered pasa_asmbl_49770.p1, internal, 157572, 157679
-recovered pasa_asmbl_49770.p1, internal, 158515, 158596
-recovered pasa_asmbl_49770.p1, internal, 158841, 158961
-recovered pasa_asmbl_49770.p1, internal, 159304, 159505
-recovered pasa_asmbl_49770.p1, internal, 159604, 159779
Couldn't classify 246063, 246875
Sorry, prediction pasa_asmbl_49761.p2 fails validation.
(TTG)	 CC	246063-246875	GA	TGG
Valid prediction for GlimmerHMM_glimmerT_18106-T1
Valid prediction for GlimmerHMM_glimmerT_18122-T1
Valid prediction for GeneMark_model.30427_t
Valid prediction for GeneMark_model.30421_t
Valid prediction for GeneMark_model.30405_t
Valid prediction for GeneMark_model.30402_t
Valid prediction for GlimmerHMM_glimmerT_18112-T1
Valid prediction for GeneMark_model.30397_t
Valid prediction for GeneMark_model.30395_t
Valid prediction for snap_scaffold_7-snap.1571-T1
Valid prediction for GeneMark_model.30412_t
Couldn't classify 96457, 96540
Sorry, prediction pasa_asmbl_49781.p1 fails validation.
(ATG)	 AA	93814-93998	GT	TTG
(GTA)	 AG	94909-95004	GT	AAG
(CTT)	 AG	95545-95730	GT	AGG
(CGA)	 AG	95880-96012	GT	GGG
(TTA)	 AG	96457-96540	AG	TGA
-recovered pasa_asmbl_49781.p1, initial, 93814, 93998
-recovered pasa_asmbl_49781.p1, internal, 94909, 95004
-recovered pasa_asmbl_49781.p1, internal, 95545, 95730
-recovered pasa_asmbl_49781.p1, internal, 95880, 96012
Valid prediction for GlimmerHMM_glimmerT_18117-T1
Valid prediction for GeneMark_model.30394_t
Valid prediction for snap_scaffold_7-snap.1575-T1
Valid prediction for snap_scaffold_7-snap.1551-T1
Valid prediction for snap_scaffold_7-snap.1560-T1
Valid prediction for snap_scaffold_7-snap.1578-T1
Valid prediction for HiQ_model.g12174.t1
Couldn't classify 135684, 135927
Sorry, prediction pasa_asmbl_49773.p1 fails validation.
(GTC)	 CA	135684-135927	GT	GGG
(GTG)	 AG	137384-137522	GT	GGG
(AGA)	 AG	137699-137877	GT	GGG
(GAA)	 AG	138840-138987	GT	GGG
(AGG)	 AG	139760-139938	GT	AGG
(ACG)	 AG	140029-140170	GT	AGG
(AGG)	 AG	140362-140576	GT	AGG
(GTC)	 AG	141148-141289	GT	ATG
(TGG)	 AG	141465-141743	GT	AGG
(GGG)	 AG	141896-142018	GT	AGG
(GTT)	 AG	142230-142510	GT	AGG
(ATT)	 AG	142751-143070	TG	GAT
-recovered pasa_asmbl_49773.p1, terminal, 142751, 143070
-recovered pasa_asmbl_49773.p1, internal, 137384, 137522
-recovered pasa_asmbl_49773.p1, internal, 137699, 137877
-recovered pasa_asmbl_49773.p1, internal, 138840, 138987
-recovered pasa_asmbl_49773.p1, internal, 139760, 139938
-recovered pasa_asmbl_49773.p1, internal, 140029, 140170
-recovered pasa_asmbl_49773.p1, internal, 140362, 140576
-recovered pasa_asmbl_49773.p1, internal, 141148, 141289
-recovered pasa_asmbl_49773.p1, internal, 141465, 141743
-recovered pasa_asmbl_49773.p1, internal, 141896, 142018
-recovered pasa_asmbl_49773.p1, internal, 142230, 142510
Valid prediction for snap_scaffold_7-snap.1565-T1
Valid prediction for GeneMark_model.30430_t
Valid prediction for Augustus_model.g12170.t1
Valid prediction for GeneMark_model.30373_t
Valid prediction for pasa_asmbl_49779.p1
Valid prediction for GeneMark_model.30377_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 14026, rend_intergenic: 8863  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 15318, rend_intergenic: 14085  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43801, rend_intergenic: 16876  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51657, rend_intergenic: 43896  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55016, rend_intergenic: 52602  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59369, rend_intergenic: 55344  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96709, rend_intergenic: 95970  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97994, rend_intergenic: 96731  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102659, rend_intergenic: 102260  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105257, rend_intergenic: 102661  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142174, rend_intergenic: 139327  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177989, rend_intergenic: 174806  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189218, rend_intergenic: 185605  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 252989
-exon list size: 767


building trellis

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41.7    
41.9    
42.0    
42.1    
42.3    
42.4    
42.5    
42.7    
42.8    
42.9    
43.0    
43.2    
43.3    
43.4    
43.6    
43.7    
43.8    
44.0    
44.1    
44.2    
44.3    
44.5    
44.6    
44.7    
44.9    
45.0    
45.1    
45.3    
45.4    
45.5    
45.6    
45.8    
45.9    
46.0    
46.2    
46.3    
46.4    
46.6    
46.7    
46.8    
46.9    
47.1    
47.2    
47.3    
47.5    
47.6    
47.7    
47.9    
48.0    
48.1    
48.2    
48.4    
48.5    
48.6    
48.8    
48.9    
49.0    
49.2    
49.3    
49.4    
49.5    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.5    
50.6    
50.7    
50.8    
51.0    
51.1    
51.2    
51.4    
51.5    
51.6    
51.8    
51.9    
52.0    
52.1    
52.3    
52.4    
52.5    
52.7    
52.8    
52.9    
53.1    
53.2    
53.3    
53.4    
53.6    
53.7    
53.8    
54.0    
54.1    
54.2    
54.4    
54.5    
54.6    
54.7    
54.9    
55.0    
55.1    
55.3    
55.4    
55.5    
55.7    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.6    
56.7    
56.8    
57.0    
57.1    
57.2    
57.3    
57.5    
57.6    
57.7    
57.9    
58.0    
58.1    
58.3    
58.4    
58.5    
58.6    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.6    
59.7    
59.8    
59.9    
60.1    
60.2    
60.3    
60.5    
60.6    
60.7    
60.9    
61.0    
61.1    
61.2    
61.4    
61.5    
61.6    
61.8    
61.9    
62.0    
62.2    
62.3    
62.4    
62.5    
62.7    
62.8    
62.9    
63.1    
63.2    
63.3    
63.5    
63.6    
63.7    
63.8    
64.0    
64.1    
64.2    
64.4    
64.5    
64.6    
64.8    
64.9    
65.0    
65.1    
65.3    
65.4    
65.5    
65.7    
65.8    
65.9    
66.1    
66.2    
66.3    
66.4    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.4    
67.5    
67.6    
67.8    
67.9    
68.0    
68.1    
68.3    
68.4    
68.5    
68.7    
68.8    
68.9    
69.1    
69.2    
69.3    
69.4    
69.6    
69.7    
69.8    
70.0    
70.1    
70.2    
70.4    
70.5    
70.6    
70.7    
70.9    
71.0    
71.1    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.0    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
73.0    
73.1    
73.2    
73.3    
73.5    
73.6    
73.7    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.6    
74.8    
74.9    
75.0    
75.2    
75.3    
75.4    
75.6    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.2    
77.4    
77.5    
77.6    
77.8    
77.9    
78.0    
78.2    
78.3    
78.4    
78.5    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.5    
79.6    
79.7    
79.8    
80.0    
80.1    
80.2    
80.4    
80.5    
80.6    
80.8    
80.9    
81.0    
81.1    
81.3    
81.4    
81.5    
81.7    
81.8    
81.9    
82.1    
82.2    
82.3    
82.4    
82.6    
82.7    
82.8    
83.0    
83.1    
83.2    
83.4    
83.5    
83.6    
83.7    
83.9    
84.0    
84.1    
84.3    
84.4    
84.5    
84.7    
84.8    
84.9    
85.0    
85.2    
85.3    
85.4    
85.6    
85.7    
85.8    
86.0    
86.1    
86.2    
86.3    
86.5    
86.6    
86.7    
86.9    
87.0    
87.1    
87.3    
87.4    
87.5    
87.6    
87.8    
87.9    
88.0    
88.2    
88.3    
88.4    
88.6    
88.7    
88.8    
88.9    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.9    
90.0    
90.1    
90.2    
90.4    
90.5    
90.6    
90.8    
90.9    
91.0    
91.2    
91.3    
91.4    
91.5    
91.7    
91.8    
91.9    
92.1    
92.2    
92.3    
92.5    
92.6    
92.7    
92.8    
93.0    
93.1    
93.2    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.1    
94.3    
94.4    
94.5    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.4    
95.6    
95.7    
95.8    
96.0    
96.1    
96.2    
96.4    
96.5    
96.6    
96.7    
96.9    
97.0    
97.1    
97.3    
97.4    
97.5    
97.7    
97.8    
97.9    
98.0    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
99.0    
99.1    
99.2    
99.3    
99.5    
99.6    
99.7    
99.9    
-found 41 predictions from path traversal
Error with prediction: snap lend_intergenic: 14026, rend_intergenic: 8863  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 15318, rend_intergenic: 14085  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43801, rend_intergenic: 16876  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51657, rend_intergenic: 43896  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55016, rend_intergenic: 52602  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59369, rend_intergenic: 55344  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96709, rend_intergenic: 95970  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97994, rend_intergenic: 96731  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102659, rend_intergenic: 102260  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105257, rend_intergenic: 102661  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142174, rend_intergenic: 139327  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177989, rend_intergenic: 174806  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189218, rend_intergenic: 185605  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 23 predictions persist after filtering for low support