-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_7/scaffold_7_559567-752669

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.28849_t
Valid prediction for snap_scaffold_7-snap.177-T1
Valid prediction for CodingQuarry_transcript_57266-T1
Valid prediction for GeneMark_model.28866_t
Valid prediction for GeneMark_model.28899_t
Valid prediction for snap_scaffold_7-snap.164-T1
Valid prediction for GlimmerHMM_glimmerT_17174-T1
Valid prediction for GeneMark_model.28878_t
Valid prediction for Augustus_model.g11515.t1
Valid prediction for GeneMark_model.28860_t
Valid prediction for snap_scaffold_7-snap.182-T1
Valid prediction for GlimmerHMM_glimmerT_17175-T1
Valid prediction for Augustus_model.g11511.t1
Valid prediction for snap_scaffold_7-snap.152-T1
Valid prediction for Augustus_model.g11518.t1
Valid prediction for GeneMark_model.28856_t
Valid prediction for snap_scaffold_7-snap.176-T1
Valid prediction for snap_scaffold_7-snap.153-T1
Valid prediction for GlimmerHMM_glimmerT_17160-T1
Valid prediction for GeneMark_model.28887_t
Valid prediction for GlimmerHMM_glimmerT_17182-T1
Valid prediction for Augustus_model.g11520.t1
Valid prediction for snap_scaffold_7-snap.146-T1
Valid prediction for GeneMark_model.28879_t
Valid prediction for GlimmerHMM_glimmerT_17177-T1
Valid prediction for GeneMark_model.28902_t
Valid prediction for snap_scaffold_7-snap.156-T1
Valid prediction for snap_scaffold_7-snap.186-T1
Valid prediction for GlimmerHMM_glimmerT_17187-T1
Valid prediction for GlimmerHMM_glimmerT_17185-T1
Valid prediction for snap_scaffold_7-snap.148-T1
Valid prediction for Augustus_model.g11516.t1
Valid prediction for GeneMark_model.28864_t
Valid prediction for Augustus_model.g11514.t1
Valid prediction for GeneMark_model.28907_t
Valid prediction for GeneMark_model.28885_t
Valid prediction for snap_scaffold_7-snap.159-T1
Valid prediction for Augustus_model.g11512.t1
Valid prediction for GeneMark_model.28901_t
Valid prediction for GeneMark_model.28847_t
Valid prediction for GlimmerHMM_glimmerT_17179-T1
Valid prediction for snap_scaffold_7-snap.181-T1
Valid prediction for snap_scaffold_7-snap.169-T1
Valid prediction for pasa_asmbl_50437.p1
Valid prediction for snap_scaffold_7-snap.150-T1
Valid prediction for GeneMark_model.28850_t
Valid prediction for snap_scaffold_7-snap.157-T1
Valid prediction for GlimmerHMM_glimmerT_17161-T1
Valid prediction for GlimmerHMM_glimmerT_17154-T1
Valid prediction for GeneMark_model.28904_t
Valid prediction for snap_scaffold_7-snap.175-T1
Valid prediction for GeneMark_model.28905_t
Valid prediction for GeneMark_model.28862_t
Valid prediction for CodingQuarry_transcript_57264-T1
Valid prediction for snap_scaffold_7-snap.147-T1
Valid prediction for GlimmerHMM_glimmerT_17181-T1
Valid prediction for GeneMark_model.28897_t
Valid prediction for GeneMark_model.28873_t
Valid prediction for Augustus_model.g11504.t1
Valid prediction for Augustus_model.g11508.t1
Valid prediction for CodingQuarry_transcript_57265-T1
Valid prediction for Augustus_model.g11507.t1
Valid prediction for snap_scaffold_7-snap.187-T1
Valid prediction for GlimmerHMM_glimmerT_17173-T1
Valid prediction for GlimmerHMM_glimmerT_17163-T1
Valid prediction for GeneMark_model.28875_t
Valid prediction for snap_scaffold_7-snap.170-T1
Valid prediction for GeneMark_model.28855_t
Valid prediction for GeneMark_model.28883_t
Valid prediction for GlimmerHMM_glimmerT_17169-T1
Valid prediction for GeneMark_model.28857_t
Valid prediction for GeneMark_model.28851_t
Valid prediction for GeneMark_model.28882_t
Valid prediction for snap_scaffold_7-snap.173-T1
Valid prediction for GeneMark_model.28853_t
Valid prediction for snap_scaffold_7-snap.151-T1
Valid prediction for GlimmerHMM_glimmerT_17155-T1
Valid prediction for GeneMark_model.28896_t
Valid prediction for GeneMark_model.28891_t
Valid prediction for GlimmerHMM_glimmerT_17156-T1
Valid prediction for snap_scaffold_7-snap.162-T1
Valid prediction for GeneMark_model.28894_t
Valid prediction for GlimmerHMM_glimmerT_17157-T1
Valid prediction for GeneMark_model.28858_t
Valid prediction for GeneMark_model.28881_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_7-snap.155-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for GeneMark_model.28852_t
Valid prediction for CodingQuarry_transcript_57269-T1
Valid prediction for GeneMark_model.28846_t
Valid prediction for GeneMark_model.28886_t
Valid prediction for snap_scaffold_7-snap.144-T1
Valid prediction for snap_scaffold_7-snap.154-T1
Valid prediction for Augustus_model.g11506.t1
Valid prediction for GeneMark_model.28900_t
Valid prediction for GeneMark_model.28877_t
Valid prediction for snap_scaffold_7-snap.179-T1
Valid prediction for snap_scaffold_7-snap.178-T1
Valid prediction for GlimmerHMM_glimmerT_17178-T1
Valid prediction for GeneMark_model.28903_t
Valid prediction for snap_scaffold_7-snap.158-T1
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for snap_scaffold_7-snap.163-T1
Valid prediction for GlimmerHMM_glimmerT_17158-T1
Valid prediction for GlimmerHMM_glimmerT_17176-T1
Valid prediction for GlimmerHMM_glimmerT_17164-T1
Valid prediction for snap_scaffold_7-snap.184-T1
Valid prediction for pasa_asmbl_49499.p1
Valid prediction for GeneMark_model.28848_t
Valid prediction for GlimmerHMM_glimmerT_17162-T1
Valid prediction for snap_scaffold_7-snap.180-T1
Valid prediction for GlimmerHMM_glimmerT_17184-T1
Couldn't classify 19716, 19785
Couldn't classify 23659, 23765
Sorry, prediction pasa_asmbl_49512.p1 fails validation.
(TGT)	 AG	19716-19785	GT	CAG
(ATG)	 AG	20288-20355	GT	AGG
(GTG)	 AG	21297-21512	GT	AGG
(GAC)	 AG	22071-22228	GT	AGG
(AGA)	 AG	22406-22501	GT	CTG
(AGT)	 AG	23178-23233	GT	TGG
(ATG)	 AG	23659-23765	CT	TCC
add_exon() Sorry, pasa_asmbl_49512.p1 20288-20355-initial-1 is invalid.
-recovered pasa_asmbl_49512.p1, initial, 20288, 20355
-recovered pasa_asmbl_49512.p1, internal, 19716, 19785
-recovered pasa_asmbl_49512.p1, internal, 20288, 20355
-recovered pasa_asmbl_49512.p1, internal, 21297, 21512
-recovered pasa_asmbl_49512.p1, internal, 22071, 22228
-recovered pasa_asmbl_49512.p1, internal, 22406, 22501
-recovered pasa_asmbl_49512.p1, internal, 23178, 23233
Valid prediction for snap_scaffold_7-snap.171-T1
Valid prediction for GlimmerHMM_glimmerT_17153-T1
Valid prediction for GlimmerHMM_glimmerT_17165-T1
Valid prediction for GeneMark_model.28854_t
Valid prediction for GeneMark_model.28863_t
Valid prediction for snap_scaffold_7-snap.168-T1
Valid prediction for GeneMark_model.28906_t
Couldn't classify 32818, 32913
Couldn't classify 40972, 41061
Sorry, prediction pasa_asmbl_49505.p1 fails validation.
(CTG)	 AG	32818-32913	GT	AGG
(GTG)	 AG	33950-34081	GT	AGG
(GGT)	 AG	34342-34551	GT	CTG
(ATC)	 AG	34997-35133	GT	AGG
(GAG)	 AG	36112-36165	GT	ATG
(GCC)	 AG	36343-36472	GT	AGG
(GTG)	 AG	37233-37314	GT	CTG
(GTG)	 AG	37620-37773	GT	CGG
(GAA)	 AG	38036-38105	GT	AGG
(AGT)	 AG	39776-39901	GT	AGG
(GGT)	 AG	40015-40167	GT	AGG
(GTG)	 AG	40605-40709	GT	GCG
(GAG)	 AG	40972-41061	TG	CAT
-recovered pasa_asmbl_49505.p1, internal, 32818, 32913
-recovered pasa_asmbl_49505.p1, internal, 33950, 34081
-recovered pasa_asmbl_49505.p1, internal, 34342, 34551
-recovered pasa_asmbl_49505.p1, internal, 34997, 35133
-recovered pasa_asmbl_49505.p1, internal, 36112, 36165
-recovered pasa_asmbl_49505.p1, internal, 36343, 36472
-recovered pasa_asmbl_49505.p1, internal, 37233, 37314
-recovered pasa_asmbl_49505.p1, internal, 37620, 37773
-recovered pasa_asmbl_49505.p1, internal, 38036, 38105
-recovered pasa_asmbl_49505.p1, internal, 39776, 39901
-recovered pasa_asmbl_49505.p1, internal, 40015, 40167
-recovered pasa_asmbl_49505.p1, internal, 40605, 40709
Valid prediction for snap_scaffold_7-snap.185-T1
Valid prediction for CodingQuarry_transcript_57272-T1
Valid prediction for GlimmerHMM_glimmerT_17168-T1
Valid prediction for GlimmerHMM_glimmerT_17172-T1
Valid prediction for GeneMark_model.28868_t
Valid prediction for GlimmerHMM_glimmerT_17170-T1
Valid prediction for Augustus_model.g11503.t1
Valid prediction for snap_scaffold_7-snap.166-T1
Valid prediction for snap_scaffold_7-snap.160-T1
Valid prediction for GeneMark_model.28892_t
Valid prediction for GeneMark_model.28895_t
Valid prediction for snap_scaffold_7-snap.145-T1
Valid prediction for GlimmerHMM_glimmerT_17159-T1
Valid prediction for GeneMark_model.28889_t
Couldn't classify 47856, 48132
Couldn't classify 48308, 48651
Sorry, prediction CodingQuarry_transcript_57268-T1 fails validation.
(ATG)	 TC	45749-45938	GT	AGG
(TGC)	 AG	46588-46673	GT	AGG
(ATT)	 AG	46984-47112	GT	AGG
(ATC)	 AG	47856-48132	CT	CTC
(TGC)	 CT	48308-48651	TC	GAT
-recovered CodingQuarry_transcript_57268-T1, initial, 45749, 45938
-recovered CodingQuarry_transcript_57268-T1, internal, 46588, 46673
-recovered CodingQuarry_transcript_57268-T1, internal, 46984, 47112
Valid prediction for GlimmerHMM_glimmerT_17183-T1
Valid prediction for snap_scaffold_7-snap.161-T1
Valid prediction for GeneMark_model.28871_t
Valid prediction for GeneMark_model.28874_t
Valid prediction for GeneMark_model.28876_t
Valid prediction for GlimmerHMM_glimmerT_17166-T1
Valid prediction for Augustus_model.g11519.t1
Valid prediction for Augustus_model.g11510.t1
Valid prediction for CodingQuarry_transcript_57271-T1
Valid prediction for HiQ_model.g11513.t1
Valid prediction for GeneMark_model.28908_t
Valid prediction for GeneMark_model.28867_t
Valid prediction for Augustus_model.g11517.t1
Valid prediction for GeneMark_model.28884_t
Valid prediction for CodingQuarry_transcript_57267-T1
Valid prediction for snap_scaffold_7-snap.165-T1
Valid prediction for Augustus_model.g11505.t1
Valid prediction for snap_scaffold_7-snap.149-T1
Valid prediction for GeneMark_model.28861_t
Valid prediction for snap_scaffold_7-snap.167-T1
Valid prediction for GlimmerHMM_glimmerT_17186-T1
Valid prediction for snap_scaffold_7-snap.183-T1
Valid prediction for Augustus_model.g11509.t1
Valid prediction for snap_scaffold_7-snap.174-T1
Valid prediction for GeneMark_model.28869_t
Valid prediction for GlimmerHMM_glimmerT_17171-T1
Couldn't classify 12646, 12711
Couldn't classify 18924, 18977
Sorry, prediction pasa_asmbl_49516.p1 fails validation.
(AGG)	 GC	12646-12711	GT	TGG
(CAT)	 AG	13318-13392	GT	AGG
(ATC)	 AG	13855-13977	GT	TGG
(GGT)	 AG	14484-14576	GT	TGG
(ATG)	 AG	14876-15141	GT	AAG
(GAC)	 AG	15236-15422	GT	TGG
(ATC)	 AG	17064-17153	GT	AGG
(GTG)	 AG	17910-17974	GT	AGG
(GTG)	 AG	18127-18277	GT	AGG
(GTA)	 AG	18924-18977	TT	GTT
-recovered pasa_asmbl_49516.p1, initial, 14876, 15141
-recovered pasa_asmbl_49516.p1, internal, 13318, 13392
-recovered pasa_asmbl_49516.p1, internal, 13855, 13977
-recovered pasa_asmbl_49516.p1, internal, 14484, 14576
-recovered pasa_asmbl_49516.p1, internal, 14876, 15141
-recovered pasa_asmbl_49516.p1, internal, 15236, 15422
-recovered pasa_asmbl_49516.p1, internal, 17064, 17153
-recovered pasa_asmbl_49516.p1, internal, 17910, 17974
-recovered pasa_asmbl_49516.p1, internal, 18127, 18277
Valid prediction for GeneMark_model.28865_t
Valid prediction for GeneMark_model.28872_t
Couldn't classify 47856, 48014
Sorry, prediction pasa_asmbl_49502.p1 fails validation.
(ATG)	 TC	45749-45938	GT	AGG
(TGC)	 AG	46588-46673	GT	AGG
(ATT)	 AG	46984-47112	GT	AGG
(ATC)	 AG	47856-48014	TC	TAT
-recovered pasa_asmbl_49502.p1, initial, 45749, 45938
-recovered pasa_asmbl_49502.p1, internal, 46588, 46673
-recovered pasa_asmbl_49502.p1, internal, 46984, 47112
Valid prediction for GeneMark_model.28880_t
Valid prediction for GeneMark_model.28898_t
Valid prediction for snap_scaffold_7-snap.172-T1
Valid prediction for GlimmerHMM_glimmerT_17167-T1
Valid prediction for GlimmerHMM_glimmerT_17180-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 27804, rend_intergenic: 14477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42765, rend_intergenic: 32300  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46664, rend_intergenic: 43338  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68833, rend_intergenic: 53577  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77914, rend_intergenic: 71069  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 78228, rend_intergenic: 77920  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80720, rend_intergenic: 78280  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 83921, rend_intergenic: 81084  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92566, rend_intergenic: 87314  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 120933, rend_intergenic: 120430  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133241, rend_intergenic: 126568  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146520, rend_intergenic: 138239  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158147, rend_intergenic: 152037  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173321, rend_intergenic: 168272  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181554, rend_intergenic: 177683  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 193103
-exon list size: 785


building trellis

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53.6    
53.7    
53.9    
54.0    
54.1    
54.3    
54.4    
54.5    
54.6    
54.8    
54.9    
55.0    
55.1    
55.3    
55.4    
55.5    
55.7    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.5    
56.7    
56.8    
56.9    
57.1    
57.2    
57.3    
57.4    
57.6    
57.7    
57.8    
57.9    
58.1    
58.2    
58.3    
58.4    
58.6    
58.7    
58.8    
59.0    
59.1    
59.2    
59.3    
59.5    
59.6    
59.7    
59.8    
60.0    
60.1    
60.2    
60.4    
60.5    
60.6    
60.7    
60.9    
61.0    
61.1    
61.2    
61.4    
61.5    
61.6    
61.8    
61.9    
62.0    
62.1    
62.3    
62.4    
62.5    
62.6    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.5    
63.7    
63.8    
63.9    
64.0    
64.2    
64.3    
64.4    
64.5    
64.7    
64.8    
64.9    
65.1    
65.2    
65.3    
65.4    
65.6    
65.7    
65.8    
65.9    
66.1    
66.2    
66.3    
66.5    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.3    
67.5    
67.6    
67.7    
67.9    
68.0    
68.1    
68.2    
68.4    
68.5    
68.6    
68.7    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.8    
69.9    
70.0    
70.1    
70.3    
70.4    
70.5    
70.6    
70.8    
70.9    
71.0    
71.2    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.0    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
72.9    
73.1    
73.2    
73.3    
73.4    
73.6    
73.7    
73.8    
74.0    
74.1    
74.2    
74.3    
74.5    
74.6    
74.7    
74.8    
75.0    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.2    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.3    
77.4    
77.5    
77.6    
77.8    
77.9    
78.0    
78.1    
78.3    
78.4    
78.5    
78.7    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.5    
79.7    
79.8    
79.9    
80.1    
80.2    
80.3    
80.4    
80.6    
80.7    
80.8    
80.9    
81.1    
81.2    
81.3    
81.4    
81.6    
81.7    
81.8    
82.0    
82.1    
82.2    
82.3    
82.5    
82.6    
82.7    
82.8    
83.0    
83.1    
83.2    
83.4    
83.5    
83.6    
83.7    
83.9    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.8    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.6    
85.8    
85.9    
86.0    
86.1    
86.3    
86.4    
86.5    
86.7    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.5    
87.7    
87.8    
87.9    
88.1    
88.2    
88.3    
88.4    
88.6    
88.7    
88.8    
88.9    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.8    
90.0    
90.1    
90.2    
90.3    
90.5    
90.6    
90.7    
90.9    
91.0    
91.1    
91.2    
91.4    
91.5    
91.6    
91.7    
91.9    
92.0    
92.1    
92.2    
92.4    
92.5    
92.6    
92.8    
92.9    
93.0    
93.1    
93.3    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.5    
94.7    
94.8    
94.9    
95.0    
95.2    
95.3    
95.4    
95.6    
95.7    
95.8    
95.9    
96.1    
96.2    
96.3    
96.4    
96.6    
96.7    
96.8    
97.0    
97.1    
97.2    
97.3    
97.5    
97.6    
97.7    
97.8    
98.0    
98.1    
98.2    
98.3    
98.5    
98.6    
98.7    
98.9    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.9    
-found 46 predictions from path traversal
Error with prediction: snap lend_intergenic: 27804, rend_intergenic: 14477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42765, rend_intergenic: 32300  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46664, rend_intergenic: 43338  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68833, rend_intergenic: 53577  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77914, rend_intergenic: 71069  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 78228, rend_intergenic: 77920  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80720, rend_intergenic: 78280  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 83921, rend_intergenic: 81084  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92566, rend_intergenic: 87314  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 120933, rend_intergenic: 120430  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133241, rend_intergenic: 126568  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146520, rend_intergenic: 138239  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158147, rend_intergenic: 152037  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173321, rend_intergenic: 168272  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181554, rend_intergenic: 177683  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 25 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 14591
-exon list size: 28


building trellis

3.3    
6.7    
10.0    
13.3    
16.7    
20.0    
23.3    
26.7    
30.0    
33.3    
36.7    
40.0    
43.3    
46.7    
50.0    
53.3    
56.7    
60.0    
63.3    
66.7    
70.0    
73.3    
76.7    
80.0    
83.3    
86.7    
90.0    
93.3    
96.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support