-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_7/scaffold_7_326775-566701

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.28842_t
Valid prediction for GlimmerHMM_glimmerT_17137-T1
Valid prediction for GlimmerHMM_glimmerT_17140-T1
Valid prediction for snap_scaffold_7-snap.130-T1
Valid prediction for snap_scaffold_7-snap.104-T1
Valid prediction for GeneMark_model.28827_t
Valid prediction for snap_scaffold_7-snap.101-T1
Valid prediction for GeneMark_model.28833_t
Valid prediction for GeneMark_model.28777_t
Valid prediction for snap_scaffold_7-snap.86-T1
Valid prediction for GeneMark_model.28798_t
Valid prediction for snap_scaffold_7-snap.95-T1
Valid prediction for GlimmerHMM_glimmerT_17148-T1
Valid prediction for snap_scaffold_7-snap.89-T1
Valid prediction for GeneMark_model.28794_t
Valid prediction for snap_scaffold_7-snap.115-T1
Valid prediction for Augustus_model.g11497.t1
Valid prediction for GeneMark_model.28775_t
Valid prediction for GeneMark_model.28810_t
Valid prediction for GeneMark_model.28838_t
Valid prediction for GlimmerHMM_glimmerT_17124-T1
Valid prediction for snap_scaffold_7-snap.117-T1
Valid prediction for GeneMark_model.28801_t
Valid prediction for Augustus_model.g11493.t1
Valid prediction for GeneMark_model.28784_t
Valid prediction for snap_scaffold_7-snap.133-T1
Valid prediction for GeneMark_model.28841_t
Valid prediction for GeneMark_model.28813_t
Valid prediction for snap_scaffold_7-snap.143-T1
Valid prediction for snap_scaffold_7-snap.82-T1
Valid prediction for GlimmerHMM_glimmerT_17149-T1
Valid prediction for GlimmerHMM_glimmerT_17128-T1
Valid prediction for GlimmerHMM_glimmerT_17129-T1
Valid prediction for GlimmerHMM_glimmerT_17133-T1
Valid prediction for GeneMark_model.28821_t
Valid prediction for GeneMark_model.28768_t
Valid prediction for GeneMark_model.28779_t
Valid prediction for GlimmerHMM_glimmerT_17131-T1
Valid prediction for GeneMark_model.28791_t
Valid prediction for GlimmerHMM_glimmerT_17125-T1
Valid prediction for GeneMark_model.28805_t
Valid prediction for GeneMark_model.28787_t
Valid prediction for snap_scaffold_7-snap.98-T1
Valid prediction for GeneMark_model.28766_t
Valid prediction for snap_scaffold_7-snap.121-T1
Valid prediction for snap_scaffold_7-snap.139-T1
Valid prediction for GeneMark_model.28816_t
Valid prediction for snap_scaffold_7-snap.113-T1
Valid prediction for snap_scaffold_7-snap.128-T1
Valid prediction for GlimmerHMM_glimmerT_17139-T1
Valid prediction for GeneMark_model.28825_t
Valid prediction for snap_scaffold_7-snap.107-T1
Valid prediction for snap_scaffold_7-snap.132-T1
Valid prediction for GeneMark_model.28799_t
Valid prediction for snap_scaffold_7-snap.120-T1
Valid prediction for GeneMark_model.28782_t
Valid prediction for GeneMark_model.28762_t
Valid prediction for GeneMark_model.28837_t
Valid prediction for GlimmerHMM_glimmerT_17150-T1
Valid prediction for GeneMark_model.28789_t
Valid prediction for GeneMark_model.28807_t
Valid prediction for snap_scaffold_7-snap.100-T1
Valid prediction for snap_scaffold_7-snap.135-T1
Valid prediction for GeneMark_model.28803_t
Valid prediction for GeneMark_model.28822_t
Valid prediction for GeneMark_model.28790_t
Valid prediction for snap_scaffold_7-snap.136-T1
Valid prediction for GeneMark_model.28776_t
Valid prediction for snap_scaffold_7-snap.91-T1
Valid prediction for GeneMark_model.28831_t
Valid prediction for snap_scaffold_7-snap.125-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for Augustus_model.g11494.t1
Valid prediction for snap_scaffold_7-snap.124-T1
Valid prediction for snap_scaffold_7-snap.112-T1
Valid prediction for GeneMark_model.28761_t
Valid prediction for snap_scaffold_7-snap.102-T1
Valid prediction for GeneMark_model.28786_t
Valid prediction for GlimmerHMM_glimmerT_17126-T1
Valid prediction for GeneMark_model.28819_t
Valid prediction for GeneMark_model.28835_t
Valid prediction for GlimmerHMM_glimmerT_17135-T1
Valid prediction for snap_scaffold_7-snap.140-T1
Valid prediction for GeneMark_model.28817_t
Valid prediction for GlimmerHMM_glimmerT_17147-T1
Valid prediction for GeneMark_model.28845_t
Valid prediction for snap_scaffold_7-snap.126-T1
Valid prediction for GeneMark_model.28781_t
Valid prediction for snap_scaffold_7-snap.141-T1
Valid prediction for snap_scaffold_7-snap.138-T1
Valid prediction for GeneMark_model.28796_t
Valid prediction for GeneMark_model.28814_t
Valid prediction for snap_scaffold_7-snap.94-T1
Valid prediction for GeneMark_model.28843_t
Valid prediction for GeneMark_model.28759_t
Valid prediction for snap_scaffold_7-snap.106-T1
Valid prediction for GeneMark_model.28793_t
Valid prediction for snap_scaffold_7-snap.85-T1
Valid prediction for GeneMark_model.28808_t
Valid prediction for GeneMark_model.28763_t
Valid prediction for GeneMark_model.28771_t
Valid prediction for snap_scaffold_7-snap.81-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g11499.t1
Valid prediction for GlimmerHMM_glimmerT_17145-T1
Valid prediction for GlimmerHMM_glimmerT_17138-T1
Valid prediction for Augustus_model.g11500.t1
Valid prediction for GeneMark_model.28829_t
Couldn't classify 184991, 185452
Sorry, prediction pasa_asmbl_50435.p1 fails validation.
(CAG)	 AG	184991-185452	AA	GGA
Valid prediction for snap_scaffold_7-snap.142-T1
Valid prediction for GeneMark_model.28778_t
Valid prediction for GlimmerHMM_glimmerT_17123-T1
Valid prediction for snap_scaffold_7-snap.122-T1
Valid prediction for GeneMark_model.28765_t
Valid prediction for snap_scaffold_7-snap.116-T1
Valid prediction for GeneMark_model.28826_t
Valid prediction for GeneMark_model.28804_t
Valid prediction for GeneMark_model.28785_t
Valid prediction for GlimmerHMM_glimmerT_17134-T1
Valid prediction for GeneMark_model.28811_t
Valid prediction for GeneMark_model.28834_t
Valid prediction for GeneMark_model.28818_t
Valid prediction for GeneMark_model.28839_t
Valid prediction for snap_scaffold_7-snap.134-T1
Valid prediction for Augustus_model.g11498.t1
Valid prediction for snap_scaffold_7-snap.105-T1
Valid prediction for snap_scaffold_7-snap.87-T1
Valid prediction for Augustus_model.g11495.t1
Valid prediction for GeneMark_model.28832_t
Valid prediction for GeneMark_model.28797_t
Valid prediction for snap_scaffold_7-snap.97-T1
Valid prediction for snap_scaffold_7-snap.123-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.28812_t
Valid prediction for GeneMark_model.28823_t
Valid prediction for GeneMark_model.28769_t
Valid prediction for snap_scaffold_7-snap.144-T1
Valid prediction for GlimmerHMM_glimmerT_17151-T1
Valid prediction for snap_scaffold_7-snap.84-T1
Valid prediction for GlimmerHMM_glimmerT_17143-T1
Valid prediction for snap_scaffold_7-snap.118-T1
Valid prediction for snap_scaffold_7-snap.96-T1
Valid prediction for snap_scaffold_7-snap.114-T1
Valid prediction for snap_scaffold_7-snap.109-T1
Valid prediction for snap_scaffold_7-snap.110-T1
Valid prediction for snap_scaffold_7-snap.131-T1
Valid prediction for GeneMark_model.28760_t
Valid prediction for GeneMark_model.28772_t
Valid prediction for GlimmerHMM_glimmerT_17146-T1
Valid prediction for snap_scaffold_7-snap.119-T1
Valid prediction for GeneMark_model.28824_t
Valid prediction for snap_scaffold_7-snap.92-T1
Valid prediction for snap_scaffold_7-snap.111-T1
Valid prediction for snap_scaffold_7-snap.93-T1
Valid prediction for GeneMark_model.28806_t
Valid prediction for GlimmerHMM_glimmerT_17130-T1
Valid prediction for GeneMark_model.28820_t
Valid prediction for GlimmerHMM_glimmerT_17141-T1
Valid prediction for snap_scaffold_7-snap.129-T1
Valid prediction for snap_scaffold_7-snap.108-T1
Valid prediction for GeneMark_model.28830_t
Valid prediction for GeneMark_model.28783_t
Valid prediction for GlimmerHMM_glimmerT_17144-T1
Valid prediction for GeneMark_model.28800_t
Valid prediction for snap_scaffold_7-snap.127-T1
Valid prediction for snap_scaffold_7-snap.88-T1
Valid prediction for snap_scaffold_7-snap.103-T1
Valid prediction for GeneMark_model.28802_t
Valid prediction for GeneMark_model.28788_t
Valid prediction for snap_scaffold_7-snap.137-T1
Valid prediction for GlimmerHMM_glimmerT_17152-T1
Valid prediction for Augustus_model.g11496.t1
Valid prediction for GeneMark_model.28767_t
Valid prediction for GeneMark_model.28815_t
Valid prediction for snap_scaffold_7-snap.90-T1
Valid prediction for Augustus_model.g11502.t1
Valid prediction for GeneMark_model.28780_t
Valid prediction for GeneMark_model.28836_t
Valid prediction for GlimmerHMM_glimmerT_17136-T1
Valid prediction for GlimmerHMM_glimmerT_17127-T1
Valid prediction for Augustus_model.g11503.t1
Valid prediction for GeneMark_model.28809_t
Valid prediction for GeneMark_model.28764_t
Valid prediction for GeneMark_model.28846_t
Valid prediction for GeneMark_model.28844_t
Valid prediction for GeneMark_model.28828_t
Valid prediction for snap_scaffold_7-snap.83-T1
Valid prediction for GeneMark_model.28792_t
Valid prediction for GlimmerHMM_glimmerT_17142-T1
Valid prediction for GeneMark_model.28770_t
Valid prediction for GeneMark_model.28774_t
Valid prediction for GeneMark_model.28795_t
Valid prediction for GlimmerHMM_glimmerT_17132-T1
Valid prediction for snap_scaffold_7-snap.99-T1
Valid prediction for Augustus_model.g11501.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 11677, rend_intergenic: 8240  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21198, rend_intergenic: 12579  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26176, rend_intergenic: 22501  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27368, rend_intergenic: 26223  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29077, rend_intergenic: 27530  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31893, rend_intergenic: 29269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33139, rend_intergenic: 32019  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37577, rend_intergenic: 34928  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46044, rend_intergenic: 39737  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54820, rend_intergenic: 51769  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59603, rend_intergenic: 55864  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67695, rend_intergenic: 59765  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71143, rend_intergenic: 70739  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79557, rend_intergenic: 73703  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91252, rend_intergenic: 81143  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102688, rend_intergenic: 94310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114727, rend_intergenic: 111792  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123287, rend_intergenic: 119017  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125539, rend_intergenic: 124867  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133190, rend_intergenic: 125817  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138512, rend_intergenic: 134119  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151510, rend_intergenic: 139437  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168910, rend_intergenic: 157910  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172102, rend_intergenic: 169673  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172777, rend_intergenic: 172462  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177536, rend_intergenic: 173667  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 187842, rend_intergenic: 184897  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199292, rend_intergenic: 188166  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205097, rend_intergenic: 200499  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208079, rend_intergenic: 205500  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215212, rend_intergenic: 208439  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 233129, rend_intergenic: 222004  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 35435, rend_intergenic: 35432  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 239927
-exon list size: 1084


building trellis

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45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.1    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.3    
49.4    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 60 predictions from path traversal
Error with prediction: snap lend_intergenic: 11677, rend_intergenic: 8240  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21198, rend_intergenic: 12579  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26176, rend_intergenic: 22501  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27368, rend_intergenic: 26223  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29077, rend_intergenic: 27530  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31893, rend_intergenic: 29269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33139, rend_intergenic: 32019  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37577, rend_intergenic: 34928  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46044, rend_intergenic: 39737  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54820, rend_intergenic: 51769  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59603, rend_intergenic: 55864  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67695, rend_intergenic: 59765  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71143, rend_intergenic: 70739  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79557, rend_intergenic: 73703  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91252, rend_intergenic: 81143  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102688, rend_intergenic: 94310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114727, rend_intergenic: 111792  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123287, rend_intergenic: 119017  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125539, rend_intergenic: 124867  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133190, rend_intergenic: 125817  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138512, rend_intergenic: 134119  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151510, rend_intergenic: 139437  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168910, rend_intergenic: 157910  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172102, rend_intergenic: 169673  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172777, rend_intergenic: 172462  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177536, rend_intergenic: 173667  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 187842, rend_intergenic: 184897  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199292, rend_intergenic: 188166  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205097, rend_intergenic: 200499  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208079, rend_intergenic: 205500  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215212, rend_intergenic: 208439  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 233129, rend_intergenic: 222004  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 35435, rend_intergenic: 35432  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 17 predictions persist after filtering for low support