-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_7/scaffold_7_2717695-2927344

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.29462_t
Valid prediction for GeneMark_model.29488_t
Valid prediction for snap_scaffold_7-snap.672-T1
Valid prediction for snap_scaffold_7-snap.675-T1
Valid prediction for GeneMark_model.29482_t
Valid prediction for GlimmerHMM_glimmerT_17486-T1
Valid prediction for GlimmerHMM_glimmerT_17502-T1
Couldn't classify 89620, 89848
Sorry, prediction pasa_asmbl_50548.p1 fails validation.
(ACG)	 AG	89620-89848	GT	TGG
(GAG)	 AG	90534-90590	GT	AGG
(TGG)	 AG	90971-91539	GG	AGG
-recovered pasa_asmbl_50548.p1, terminal, 90971, 91539
-recovered pasa_asmbl_50548.p1, internal, 89620, 89848
-recovered pasa_asmbl_50548.p1, internal, 90534, 90590
Valid prediction for GeneMark_model.29450_t
Valid prediction for GlimmerHMM_glimmerT_17484-T1
Valid prediction for GeneMark_model.29446_t
Valid prediction for snap_scaffold_7-snap.660-T1
Valid prediction for Augustus_model.g11720.t1
Valid prediction for GlimmerHMM_glimmerT_17480-T1
Valid prediction for snap_scaffold_7-snap.655-T1
Valid prediction for Augustus_model.g11718.t1
Valid prediction for GeneMark_model.29469_t
Valid prediction for GlimmerHMM_glimmerT_17505-T1
Valid prediction for GlimmerHMM_glimmerT_17498-T1
Valid prediction for snap_scaffold_7-snap.686-T1
Valid prediction for snap_scaffold_7-snap.701-T1
Valid prediction for Augustus_model.g11699.t1
Valid prediction for snap_scaffold_7-snap.693-T1
Valid prediction for GlimmerHMM_glimmerT_17504-T1
Valid prediction for GeneMark_model.29476_t
Valid prediction for GlimmerHMM_glimmerT_17510-T1
Valid prediction for snap_scaffold_7-snap.654-T1
Valid prediction for snap_scaffold_7-snap.674-T1
Valid prediction for Augustus_model.g11708.t1
Valid prediction for Augustus_model.g11705.t1
Valid prediction for GeneMark_model.29445_t
Valid prediction for snap_scaffold_7-snap.699-T1
Valid prediction for Augustus_model.g11709.t1
Couldn't classify 3852, 4114
Sorry, prediction pasa_asmbl_50540.p1 fails validation.
(ATG)	 GG	3044-3158	GT	TGG
(CCT)	 AG	3852-4114	CT	ACC
-recovered pasa_asmbl_50540.p1, initial, 3044, 3158
Valid prediction for GeneMark_model.29453_t
Valid prediction for Augustus_model.g11698.t1
Valid prediction for GlimmerHMM_glimmerT_17483-T1
Valid prediction for GlimmerHMM_glimmerT_17509-T1
Couldn't classify 14943, 15078
Sorry, prediction pasa_asmbl_50541.p1 fails validation.
(ATC)	 AG	14943-15078	GT	CAG
(GAT)	 AG	15282-15426	GT	GGG
(GCA)	 AG	15893-15981	GT	ACG
(TTG)	 AG	16207-16302	GT	AGG
(GTG)	 AG	16631-16711	GT	ATG
(TGG)	 AG	16840-16932	GT	CGG
(GTG)	 AG	17230-17348	GT	TGG
(TAC)	 AG	17622-17731	GT	ATG
(GTT)	 AG	18359-18518	GT	TGG
(TGG)	 AG	19070-19206	GT	CTG
(GTA)	 AG	19398-19866	CT	GAC
-recovered pasa_asmbl_50541.p1, terminal, 19398, 19866
-recovered pasa_asmbl_50541.p1, internal, 14943, 15078
-recovered pasa_asmbl_50541.p1, internal, 15282, 15426
-recovered pasa_asmbl_50541.p1, internal, 15893, 15981
-recovered pasa_asmbl_50541.p1, internal, 16207, 16302
-recovered pasa_asmbl_50541.p1, internal, 16631, 16711
-recovered pasa_asmbl_50541.p1, internal, 16840, 16932
-recovered pasa_asmbl_50541.p1, internal, 17230, 17348
-recovered pasa_asmbl_50541.p1, internal, 17622, 17731
-recovered pasa_asmbl_50541.p1, internal, 18359, 18518
-recovered pasa_asmbl_50541.p1, internal, 19070, 19206
Valid prediction for GeneMark_model.29492_t
Valid prediction for GeneMark_model.29479_t
Valid prediction for snap_scaffold_7-snap.705-T1
Valid prediction for snap_scaffold_7-snap.688-T1
Valid prediction for GlimmerHMM_glimmerT_17491-T1
Valid prediction for snap_scaffold_7-snap.661-T1
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for GeneMark_model.29471_t
Valid prediction for GlimmerHMM_glimmerT_17485-T1
Valid prediction for Augustus_model.g11711.t1
Valid prediction for snap_scaffold_7-snap.695-T1
Valid prediction for GeneMark_model.29448_t
Valid prediction for snap_scaffold_7-snap.690-T1
Valid prediction for snap_scaffold_7-snap.697-T1
Valid prediction for Augustus_model.g11715.t1
Valid prediction for GeneMark_model.29490_t
Valid prediction for snap_scaffold_7-snap.646-T1
Valid prediction for GlimmerHMM_glimmerT_17507-T1
Valid prediction for snap_scaffold_7-snap.684-T1
Valid prediction for snap_scaffold_7-snap.649-T1
Valid prediction for GeneMark_model.29467_t
Valid prediction for GeneMark_model.29451_t
Valid prediction for Augustus_model.g11704.t1
Valid prediction for snap_scaffold_7-snap.683-T1
Couldn't classify 25184, 25207
Couldn't classify 25662, 25770
Sorry, prediction pasa_asmbl_50546.p1 fails validation.
(CTT)	 TA	25184-25207	AT	GGA
(ATC)	 AC	25662-25770	GT	AGG
(CTT)	 AG	26058-26116	GT	CTG
(GAC)	 AG	26213-26316	GT	AGG
(GTA)	 AG	26408-26481	GT	AGG
(CTG)	 AG	26733-26818	GT	CTG
(GAT)	 AG	26995-27047	GT	GTG
(AGC)	 AG	27158-27188	GT	AGG
(GAA)	 AG	27329-27370	AT	AGA
add_exon() Sorry, pasa_asmbl_50546.p1 26408-26481-terminal-2 is invalid.
-recovered pasa_asmbl_50546.p1, terminal, 26408, 26481
-recovered pasa_asmbl_50546.p1, terminal, 27329, 27370
-recovered pasa_asmbl_50546.p1, internal, 26058, 26116
-recovered pasa_asmbl_50546.p1, internal, 26213, 26316
-recovered pasa_asmbl_50546.p1, internal, 26408, 26481
-recovered pasa_asmbl_50546.p1, internal, 26733, 26818
-recovered pasa_asmbl_50546.p1, internal, 26995, 27047
-recovered pasa_asmbl_50546.p1, internal, 27158, 27188
Valid prediction for GeneMark_model.29481_t
Valid prediction for GeneMark_model.29483_t
Valid prediction for Augustus_model.g11721.t1
Valid prediction for GeneMark_model.29457_t
Valid prediction for GlimmerHMM_glimmerT_17490-T1
Valid prediction for Augustus_model.g11700.t1
Valid prediction for GeneMark_model.29459_t
Valid prediction for GeneMark_model.29484_t
Valid prediction for snap_scaffold_7-snap.680-T1
Couldn't classify 20948, 21115
Sorry, prediction pasa_asmbl_50544.p1 fails validation.
(ACA)	 GC	20948-21115	GT	ATG
(ACC)	 AG	21913-21973	GT	AGG
(TTG)	 AG	22080-22171	GT	AGG
(GAG)	 AG	22383-22517	GT	ACG
(AAA)	 AG	22634-22687	GT	CGG
(GAC)	 AG	22806-22980	GT	CGG
(TGA)	 AG	23305-23366	GT	TAG
(TTC)	 AG	23880-24095	TG	AGT
-recovered pasa_asmbl_50544.p1, terminal, 23880, 24095
-recovered pasa_asmbl_50544.p1, internal, 21913, 21973
-recovered pasa_asmbl_50544.p1, internal, 22080, 22171
-recovered pasa_asmbl_50544.p1, internal, 22383, 22517
-recovered pasa_asmbl_50544.p1, internal, 22634, 22687
-recovered pasa_asmbl_50544.p1, internal, 22806, 22980
-recovered pasa_asmbl_50544.p1, internal, 23305, 23366
Valid prediction for GeneMark_model.29486_t
Valid prediction for GlimmerHMM_glimmerT_17492-T1
Valid prediction for snap_scaffold_7-snap.706-T1
Valid prediction for snap_scaffold_7-snap.651-T1
Valid prediction for GeneMark_model.29473_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g11712.t1
Valid prediction for snap_scaffold_7-snap.666-T1
Valid prediction for Augustus_model.g11706.t1
Valid prediction for GeneMark_model.29455_t
Valid prediction for GeneMark_model.29485_t
Valid prediction for snap_scaffold_7-snap.696-T1
Valid prediction for pasa_asmbl_49584.p1
Valid prediction for GlimmerHMM_glimmerT_17493-T1
Valid prediction for GeneMark_model.29475_t
Valid prediction for snap_scaffold_7-snap.681-T1
Valid prediction for Augustus_model.g11719.t1
Valid prediction for GlimmerHMM_glimmerT_17494-T1
Valid prediction for snap_scaffold_7-snap.657-T1
Valid prediction for snap_scaffold_7-snap.685-T1
Valid prediction for snap_scaffold_7-snap.658-T1
Valid prediction for GeneMark_model.29470_t
Valid prediction for snap_scaffold_7-snap.671-T1
Valid prediction for snap_scaffold_7-snap.652-T1
Valid prediction for snap_scaffold_7-snap.667-T1
Valid prediction for GeneMark_model.29489_t
Valid prediction for snap_scaffold_7-snap.691-T1
Valid prediction for GeneMark_model.29447_t
Valid prediction for snap_scaffold_7-snap.703-T1
Valid prediction for snap_scaffold_7-snap.656-T1
Valid prediction for GeneMark_model.29464_t
Valid prediction for GlimmerHMM_glimmerT_17506-T1
Valid prediction for snap_scaffold_7-snap.702-T1
Valid prediction for Augustus_model.g11717.t1
Valid prediction for GlimmerHMM_glimmerT_17481-T1
Valid prediction for snap_scaffold_7-snap.659-T1
Valid prediction for snap_scaffold_7-snap.692-T1
Valid prediction for snap_scaffold_7-snap.677-T1
Valid prediction for Augustus_model.g11713.t1
Valid prediction for GlimmerHMM_glimmerT_17488-T1
Valid prediction for snap_scaffold_7-snap.673-T1
Valid prediction for CodingQuarry_transcript_57296-T1
Valid prediction for Augustus_model.g11701.t1
Valid prediction for snap_scaffold_7-snap.669-T1
Valid prediction for snap_scaffold_7-snap.679-T1
Valid prediction for GeneMark_model.29480_t
Valid prediction for snap_scaffold_7-snap.662-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_17489-T1
Valid prediction for GeneMark_model.29468_t
Valid prediction for GlimmerHMM_glimmerT_17508-T1
Valid prediction for snap_scaffold_7-snap.682-T1
Valid prediction for GeneMark_model.29452_t
Valid prediction for HiQ_model.g11716.t1
Valid prediction for snap_scaffold_7-snap.676-T1
Valid prediction for HiQ_model.g11707.t1
Valid prediction for GeneMark_model.29449_t
Valid prediction for pasa_asmbl_49585.p3
Valid prediction for GeneMark_model.29472_t
Valid prediction for GlimmerHMM_glimmerT_17495-T1
Valid prediction for snap_scaffold_7-snap.647-T1
Valid prediction for snap_scaffold_7-snap.694-T1
Valid prediction for snap_scaffold_7-snap.698-T1
Valid prediction for snap_scaffold_7-snap.689-T1
Valid prediction for snap_scaffold_7-snap.668-T1
Valid prediction for Augustus_model.g11703.t1
Valid prediction for Augustus_model.g11714.t1
Valid prediction for GeneMark_model.29477_t
Valid prediction for snap_scaffold_7-snap.670-T1
Valid prediction for snap_scaffold_7-snap.665-T1
Valid prediction for GlimmerHMM_glimmerT_17499-T1
Valid prediction for snap_scaffold_7-snap.663-T1
Valid prediction for snap_scaffold_7-snap.687-T1
Valid prediction for GeneMark_model.29461_t
Valid prediction for GlimmerHMM_glimmerT_17500-T1
Valid prediction for GeneMark_model.29491_t
Valid prediction for GeneMark_model.29465_t
Valid prediction for snap_scaffold_7-snap.650-T1
Valid prediction for GlimmerHMM_glimmerT_17487-T1
Valid prediction for GlimmerHMM_glimmerT_17503-T1
Valid prediction for GeneMark_model.29463_t
Valid prediction for Augustus_model.g11702.t1
Valid prediction for snap_scaffold_7-snap.678-T1
Valid prediction for GeneMark_model.29458_t
Valid prediction for GlimmerHMM_glimmerT_17496-T1
Valid prediction for snap_scaffold_7-snap.648-T1
Valid prediction for GlimmerHMM_glimmerT_17497-T1
Valid prediction for GlimmerHMM_glimmerT_17482-T1
Valid prediction for snap_scaffold_7-snap.704-T1
Valid prediction for snap_scaffold_7-snap.700-T1
Valid prediction for snap_scaffold_7-snap.653-T1
Valid prediction for GlimmerHMM_glimmerT_17501-T1
Valid prediction for GeneMark_model.29487_t
Valid prediction for snap_scaffold_7-snap.664-T1
Valid prediction for GeneMark_model.29460_t
Valid prediction for CodingQuarry_transcript_57297-T1
Valid prediction for Augustus_model.g11710.t1
Valid prediction for GeneMark_model.29474_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 6925, rend_intergenic: 3857  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 8255, rend_intergenic: 7021  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 9917, rend_intergenic: 8432  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 11302, rend_intergenic: 10531  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17735, rend_intergenic: 11563  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19655, rend_intergenic: 18372  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28431, rend_intergenic: 23945  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91124, rend_intergenic: 89322  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104247, rend_intergenic: 94901  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 126723, rend_intergenic: 123597  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134159, rend_intergenic: 127803  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141999, rend_intergenic: 139841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149443, rend_intergenic: 142202  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165751, rend_intergenic: 158599  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172174, rend_intergenic: 168101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178829, rend_intergenic: 174811  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181730, rend_intergenic: 180135  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 183610, rend_intergenic: 182044  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 187135, rend_intergenic: 183698  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192938, rend_intergenic: 189608  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199407, rend_intergenic: 193793  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 209650
-exon list size: 714


building trellis

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56.3    
56.4    
56.6    
56.7    
56.8    
57.0    
57.1    
57.3    
57.4    
57.5    
57.7    
57.8    
58.0    
58.1    
58.2    
58.4    
58.5    
58.7    
58.8    
58.9    
59.1    
59.2    
59.4    
59.5    
59.6    
59.8    
59.9    
60.1    
60.2    
60.3    
60.5    
60.6    
60.8    
60.9    
61.0    
61.2    
61.3    
61.5    
61.6    
61.7    
61.9    
62.0    
62.2    
62.3    
62.4    
62.6    
62.7    
62.8    
63.0    
63.1    
63.3    
63.4    
63.5    
63.7    
63.8    
64.0    
64.1    
64.2    
64.4    
64.5    
64.7    
64.8    
64.9    
65.1    
65.2    
65.4    
65.5    
65.6    
65.8    
65.9    
66.1    
66.2    
66.3    
66.5    
66.6    
66.8    
66.9    
67.0    
67.2    
67.3    
67.5    
67.6    
67.7    
67.9    
68.0    
68.2    
68.3    
68.4    
68.6    
68.7    
68.9    
69.0    
69.1    
69.3    
69.4    
69.6    
69.7    
69.8    
70.0    
70.1    
70.3    
70.4    
70.5    
70.7    
70.8    
70.9    
71.1    
71.2    
71.4    
71.5    
71.6    
71.8    
71.9    
72.1    
72.2    
72.3    
72.5    
72.6    
72.8    
72.9    
73.0    
73.2    
73.3    
73.5    
73.6    
73.7    
73.9    
74.0    
74.2    
74.3    
74.4    
74.6    
74.7    
74.9    
75.0    
75.1    
75.3    
75.4    
75.6    
75.7    
75.8    
76.0    
76.1    
76.3    
76.4    
76.5    
76.7    
76.8    
77.0    
77.1    
77.2    
77.4    
77.5    
77.7    
77.8    
77.9    
78.1    
78.2    
78.4    
78.5    
78.6    
78.8    
78.9    
79.1    
79.2    
79.3    
79.5    
79.6    
79.7    
79.9    
80.0    
80.2    
80.3    
80.4    
80.6    
80.7    
80.9    
81.0    
81.1    
81.3    
81.4    
81.6    
81.7    
81.8    
82.0    
82.1    
82.3    
82.4    
82.5    
82.7    
82.8    
83.0    
83.1    
83.2    
83.4    
83.5    
83.7    
83.8    
83.9    
84.1    
84.2    
84.4    
84.5    
84.6    
84.8    
84.9    
85.1    
85.2    
85.3    
85.5    
85.6    
85.8    
85.9    
86.0    
86.2    
86.3    
86.5    
86.6    
86.7    
86.9    
87.0    
87.2    
87.3    
87.4    
87.6    
87.7    
87.8    
88.0    
88.1    
88.3    
88.4    
88.5    
88.7    
88.8    
89.0    
89.1    
89.2    
89.4    
89.5    
89.7    
89.8    
89.9    
90.1    
90.2    
90.4    
90.5    
90.6    
90.8    
90.9    
91.1    
91.2    
91.3    
91.5    
91.6    
91.8    
91.9    
92.0    
92.2    
92.3    
92.5    
92.6    
92.7    
92.9    
93.0    
93.2    
93.3    
93.4    
93.6    
93.7    
93.9    
94.0    
94.1    
94.3    
94.4    
94.6    
94.7    
94.8    
95.0    
95.1    
95.3    
95.4    
95.5    
95.7    
95.8    
95.9    
96.1    
96.2    
96.4    
96.5    
96.6    
96.8    
96.9    
97.1    
97.2    
97.3    
97.5    
97.6    
97.8    
97.9    
98.0    
98.2    
98.3    
98.5    
98.6    
98.7    
98.9    
99.0    
99.2    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 38 predictions from path traversal
Error with prediction: snap lend_intergenic: 6925, rend_intergenic: 3857  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 8255, rend_intergenic: 7021  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 9917, rend_intergenic: 8432  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 11302, rend_intergenic: 10531  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17735, rend_intergenic: 11563  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19655, rend_intergenic: 18372  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28431, rend_intergenic: 23945  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91124, rend_intergenic: 89322  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104247, rend_intergenic: 94901  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 126723, rend_intergenic: 123597  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134159, rend_intergenic: 127803  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141999, rend_intergenic: 139841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149443, rend_intergenic: 142202  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165751, rend_intergenic: 158599  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172174, rend_intergenic: 168101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178829, rend_intergenic: 174811  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181730, rend_intergenic: 180135  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 183610, rend_intergenic: 182044  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 187135, rend_intergenic: 183698  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192938, rend_intergenic: 189608  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199407, rend_intergenic: 193793  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 27 predictions persist after filtering for low support