-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_7/scaffold_7_17942652-18121628

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_7-snap.3480-T1
Valid prediction for GeneMark_model.32757_t
Valid prediction for GlimmerHMM_glimmerT_19346-T1
Valid prediction for GlimmerHMM_glimmerT_19342-T1
Valid prediction for snap_scaffold_7-snap.3492-T1
Valid prediction for snap_scaffold_7-snap.3501-T1
Valid prediction for snap_scaffold_7-snap.3484-T1
Valid prediction for GeneMark_model.32759_t
Valid prediction for GeneMark_model.32741_t
Valid prediction for GeneMark_model.32753_t
Valid prediction for snap_scaffold_7-snap.3508-T1
Valid prediction for snap_scaffold_7-snap.3482-T1
Valid prediction for GeneMark_model.32775_t
Valid prediction for snap_scaffold_7-snap.3509-T1
Valid prediction for snap_scaffold_7-snap.3478-T1
Valid prediction for GeneMark_model.32751_t
Valid prediction for GeneMark_model.32737_t
Valid prediction for GlimmerHMM_glimmerT_19348-T1
Valid prediction for GeneMark_model.32732_t
Valid prediction for GeneMark_model.32743_t
Valid prediction for snap_scaffold_7-snap.3490-T1
Valid prediction for snap_scaffold_7-snap.3514-T1
Valid prediction for snap_scaffold_7-snap.3506-T1
Valid prediction for GeneMark_model.32769_t
Valid prediction for GeneMark_model.32761_t
Valid prediction for snap_scaffold_7-snap.3504-T1
Valid prediction for snap_scaffold_7-snap.3511-T1
Valid prediction for GeneMark_model.32772_t
Valid prediction for HiQ_model.g13037.t1
Valid prediction for GlimmerHMM_glimmerT_19359-T1
Valid prediction for snap_scaffold_7-snap.3497-T1
Valid prediction for GeneMark_model.32748_t
Valid prediction for snap_scaffold_7-snap.3481-T1
Valid prediction for GeneMark_model.32747_t
Valid prediction for snap_scaffold_7-snap.3494-T1
Valid prediction for GeneMark_model.32777_t
Valid prediction for snap_scaffold_7-snap.3483-T1
Valid prediction for snap_scaffold_7-snap.3476-T1
Valid prediction for snap_scaffold_7-snap.3496-T1
Valid prediction for snap_scaffold_7-snap.3475-T1
Valid prediction for snap_scaffold_7-snap.3503-T1
Valid prediction for GeneMark_model.32763_t
Valid prediction for GeneMark_model.32755_t
Valid prediction for GeneMark_model.32731_t
Valid prediction for snap_scaffold_7-snap.3493-T1
Valid prediction for GlimmerHMM_glimmerT_19344-T1
Valid prediction for GeneMark_model.32779_t
Valid prediction for GeneMark_model.32734_t
Valid prediction for snap_scaffold_7-snap.3500-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.32739_t
Valid prediction for GeneMark_model.32767_t
Valid prediction for GeneMark_model.32765_t
Valid prediction for snap_scaffold_7-snap.3477-T1
Valid prediction for snap_scaffold_7-snap.3488-T1
Couldn't classify 58425, 58625
Sorry, prediction pasa_asmbl_51398.p1 fails validation.
(CAG)	 TG	58425-58625	GT	AGG
(GTG)	 AG	58780-59412	AG	AAA
-recovered pasa_asmbl_51398.p1, terminal, 58780, 59412
Valid prediction for snap_scaffold_7-snap.3487-T1
Valid prediction for GeneMark_model.32750_t
Valid prediction for GeneMark_model.32745_t
Valid prediction for Augustus_model.g13036.t1
Valid prediction for GlimmerHMM_glimmerT_19362-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.32738_t
Valid prediction for GlimmerHMM_glimmerT_19356-T1
Valid prediction for GeneMark_model.32766_t
Valid prediction for GlimmerHMM_glimmerT_19360-T1
Valid prediction for GeneMark_model.32749_t
Valid prediction for GeneMark_model.32752_t
Valid prediction for Augustus_model.g13039.t1
Couldn't classify 107942, 108041
Sorry, prediction pasa_asmbl_50267.p1 fails validation.
(GTG)	 GG	107942-108041	GT	AGG
(TGG)	 AG	109491-109684	GT	AGG
(GAC)	 AG	110446-110541	GT	AGG
(GGC)	 AG	110796-110906	GT	CTG
(ATT)	 AG	110997-111075	GT	CGG
(ATG)	 AG	111449-111632	GT	TGG
(GTC)	 AG	112357-112482	GT	AAG
(TTT)	 AG	112877-113036	GT	AGG
(GGG)	 AG	113164-113220	GT	AGG
(GAC)	 AG	113607-113747	CC	GAC
add_exon() Sorry, pasa_asmbl_50267.p1 111449-111632-initial-1 is invalid.
-recovered pasa_asmbl_50267.p1, initial, 111449, 111632
-recovered pasa_asmbl_50267.p1, terminal, 113607, 113747
-recovered pasa_asmbl_50267.p1, internal, 109491, 109684
-recovered pasa_asmbl_50267.p1, internal, 110446, 110541
-recovered pasa_asmbl_50267.p1, internal, 110796, 110906
-recovered pasa_asmbl_50267.p1, internal, 110997, 111075
-recovered pasa_asmbl_50267.p1, internal, 111449, 111632
-recovered pasa_asmbl_50267.p1, internal, 112357, 112482
-recovered pasa_asmbl_50267.p1, internal, 112877, 113036
-recovered pasa_asmbl_50267.p1, internal, 113164, 113220
Couldn't classify 87471, 87598
Sorry, prediction pasa_asmbl_50271.p1 fails validation.
(ATG)	 GC	85905-85994	GT	CGG
(AGC)	 AG	86923-87112	GT	AGG
(GAG)	 AG	87471-87598	CT	CGC
-recovered pasa_asmbl_50271.p1, initial, 85905, 85994
-recovered pasa_asmbl_50271.p1, internal, 86923, 87112
Valid prediction for GeneMark_model.32778_t
Couldn't classify 10016, 10168
Couldn't classify 11409, 11519
Sorry, prediction CodingQuarry_transcript_57607-T1 fails validation.
(ATG)	 AG	3989-4237	GT	AGG
(AGA)	 AG	4394-4620	GT	GAG
(AGA)	 AG	4892-5187	GT	CGG
(TCT)	 AG	5361-5501	GT	GGG
(GGA)	 AG	5619-5870	GT	CGG
(GTG)	 AG	7045-7245	GT	CAG
(TGA)	 AG	7670-7903	GT	CGG
(GAG)	 AG	8140-8280	GT	TGG
(ATG)	 AG	9424-9552	GT	CGG
(AGG)	 AG	10016-10168	GA	TGG
(AGT)	 CG	11409-11519	GT	AGG
(AGA)	 AG	12420-12647	GT	GTG
(GCA)	 AG	13083-13255	GT	CAG
(GAG)	 AG	14131-14257	GT	AGG
(AAC)	 AG	14818-14989	GT	GGG
(ACA)	 AG	15192-15349	GT	AGG
(GCA)	 AG	15432-15555	GT	AGG
(GGA)	 AG	16823-16935	GT	GGG
(GAC)	 AG	17856-17986	GG	GAG
-recovered CodingQuarry_transcript_57607-T1, initial, 3989, 4237
-recovered CodingQuarry_transcript_57607-T1, initial, 9424, 9552
add_exon() Sorry, CodingQuarry_transcript_57607-T1 4394-4620-terminal-2 is invalid.
-recovered CodingQuarry_transcript_57607-T1, terminal, 4394, 4620
-recovered CodingQuarry_transcript_57607-T1, terminal, 17856, 17986
-recovered CodingQuarry_transcript_57607-T1, internal, 3989, 4237
-recovered CodingQuarry_transcript_57607-T1, internal, 4394, 4620
-recovered CodingQuarry_transcript_57607-T1, internal, 4892, 5187
-recovered CodingQuarry_transcript_57607-T1, internal, 5361, 5501
-recovered CodingQuarry_transcript_57607-T1, internal, 5619, 5870
-recovered CodingQuarry_transcript_57607-T1, internal, 7045, 7245
-recovered CodingQuarry_transcript_57607-T1, internal, 7670, 7903
-recovered CodingQuarry_transcript_57607-T1, internal, 8140, 8280
-recovered CodingQuarry_transcript_57607-T1, internal, 9424, 9552
-recovered CodingQuarry_transcript_57607-T1, internal, 12420, 12647
-recovered CodingQuarry_transcript_57607-T1, internal, 13083, 13255
-recovered CodingQuarry_transcript_57607-T1, internal, 14131, 14257
-recovered CodingQuarry_transcript_57607-T1, internal, 14818, 14989
-recovered CodingQuarry_transcript_57607-T1, internal, 15192, 15349
-recovered CodingQuarry_transcript_57607-T1, internal, 15432, 15555
-recovered CodingQuarry_transcript_57607-T1, internal, 16823, 16935
Valid prediction for GeneMark_model.32754_t
Valid prediction for snap_scaffold_7-snap.3474-T1
Valid prediction for GlimmerHMM_glimmerT_19347-T1
Valid prediction for GlimmerHMM_glimmerT_19361-T1
Valid prediction for Augustus_model.g13042.t1
Valid prediction for pasa_asmbl_50398.p1
Couldn't classify 82715, 82863
Couldn't classify 85764, 85847
Sorry, prediction pasa_asmbl_50272.p1 fails validation.
(GGG)	 CA	82715-82863	GT	AGG
(AAA)	 AG	82995-83061	GT	AGG
(TAC)	 AG	83335-83491	GT	GGG
(ATC)	 AG	84601-84741	GT	AGG
(GGT)	 AG	85321-85538	GT	CGG
(ACG)	 AG	85764-85847	AC	AGA
-recovered pasa_asmbl_50272.p1, internal, 82995, 83061
-recovered pasa_asmbl_50272.p1, internal, 83335, 83491
-recovered pasa_asmbl_50272.p1, internal, 84601, 84741
-recovered pasa_asmbl_50272.p1, internal, 85321, 85538
Valid prediction for GlimmerHMM_glimmerT_19352-T1
Valid prediction for snap_scaffold_7-snap.3485-T1
Valid prediction for GlimmerHMM_glimmerT_19358-T1
Valid prediction for snap_scaffold_7-snap.3513-T1
Valid prediction for GeneMark_model.32776_t
Valid prediction for GeneMark_model.32758_t
Valid prediction for snap_scaffold_7-snap.3495-T1
Valid prediction for GeneMark_model.32762_t
Valid prediction for snap_scaffold_7-snap.3486-T1
Valid prediction for HiQ_model.g13044.t1
Couldn't classify 168759, 168954
Sorry, prediction pasa_asmbl_50264.p1 fails validation.
(GGG)	 CG	168759-168954	GT	AGG
(TGG)	 AG	169331-169441	GT	AGG
(CCC)	 AG	169670-169894	GT	GTG
(CGG)	 AG	170005-170151	GT	AAG
(GTA)	 AG	170411-170556	CA	GAC
-recovered pasa_asmbl_50264.p1, terminal, 170411, 170556
-recovered pasa_asmbl_50264.p1, internal, 169331, 169441
-recovered pasa_asmbl_50264.p1, internal, 169670, 169894
-recovered pasa_asmbl_50264.p1, internal, 170005, 170151
Valid prediction for GeneMark_model.32768_t
Valid prediction for GlimmerHMM_glimmerT_19349-T1
Valid prediction for GeneMark_model.32770_t
Couldn't classify 90671, 90750
Sorry, prediction pasa_asmbl_50270.p1 fails validation.
(AGC)	 CC	90671-90750	GT	AGG
(GTT)	 AG	90894-90991	GT	AGG
(TGG)	 AG	91338-91494	GT	AGG
(ACT)	 AG	91641-91712	GT	AGG
(CCT)	 AG	91971-92109	AG	GAA
-recovered pasa_asmbl_50270.p1, terminal, 91971, 92109
-recovered pasa_asmbl_50270.p1, internal, 90894, 90991
-recovered pasa_asmbl_50270.p1, internal, 91338, 91494
-recovered pasa_asmbl_50270.p1, internal, 91641, 91712
Valid prediction for snap_scaffold_7-snap.3505-T1
Valid prediction for snap_scaffold_7-snap.3498-T1
Couldn't classify 145042, 145074
Couldn't classify 152656, 152733
Sorry, prediction pasa_asmbl_50266.p1 fails validation.
(GTC)	 AG	145042-145074	GT	AGG
(GTG)	 AG	145791-145881	GT	TGG
(TGT)	 AG	146588-146667	GC	AGG
(ACC)	 AG	146816-146907	GT	GTG
(TCA)	 AG	149620-149761	GT	TGG
(GTC)	 AG	152656-152733	TT	AGT
-recovered pasa_asmbl_50266.p1, internal, 145042, 145074
-recovered pasa_asmbl_50266.p1, internal, 145791, 145881
-recovered pasa_asmbl_50266.p1, internal, 146588, 146667
-recovered pasa_asmbl_50266.p1, internal, 146816, 146907
-recovered pasa_asmbl_50266.p1, internal, 149620, 149761
Valid prediction for GeneMark_model.32730_t
Valid prediction for HiQ_model.g13038.t1
Valid prediction for GeneMark_model.32764_t
Valid prediction for GeneMark_model.32771_t
Valid prediction for GlimmerHMM_glimmerT_19357-T1
Valid prediction for snap_scaffold_7-snap.3510-T1
Valid prediction for GeneMark_model.32746_t
Valid prediction for GlimmerHMM_glimmerT_19343-T1
Valid prediction for GlimmerHMM_glimmerT_19355-T1
Valid prediction for GlimmerHMM_glimmerT_19363-T1
Valid prediction for Augustus_model.g13035.t1
Valid prediction for snap_scaffold_7-snap.3473-T1
Valid prediction for snap_scaffold_7-snap.3491-T1
Valid prediction for Augustus_model.g13043.t1
Valid prediction for GlimmerHMM_glimmerT_19345-T1
Valid prediction for snap_scaffold_7-snap.3479-T1
Valid prediction for GeneMark_model.32742_t
Valid prediction for GeneMark_model.32780_t
Valid prediction for CodingQuarry_transcript_57606-T1
Valid prediction for GlimmerHMM_glimmerT_19341-T1
Valid prediction for Augustus_model.g13041.t1
Couldn't classify 67787, 67992
Couldn't classify 68377, 68500
Sorry, prediction pasa_asmbl_50366.p1 fails validation.
(GAC)	 CT	67787-67992	GT	AGG
(GTC)	 AG	68377-68500	GC	AGG
-recovered pasa_asmbl_50366.p1, internal, 68377, 68500
Valid prediction for GeneMark_model.32744_t
Valid prediction for GeneMark_model.32774_t
Valid prediction for GlimmerHMM_glimmerT_19351-T1
Valid prediction for snap_scaffold_7-snap.3499-T1
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_19350-T1
Valid prediction for GeneMark_model.32736_t
Valid prediction for GlimmerHMM_glimmerT_19354-T1
Valid prediction for GeneMark_model.32760_t
Valid prediction for snap_scaffold_7-snap.3502-T1
Valid prediction for snap_scaffold_7-snap.3507-T1
Valid prediction for HiQ_model.g13033.t1
Valid prediction for snap_scaffold_7-snap.3512-T1
Valid prediction for snap_scaffold_7-snap.3489-T1
Valid prediction for Augustus_model.g13034.t1
Valid prediction for GlimmerHMM_glimmerT_19353-T1
Valid prediction for GeneMark_model.32740_t
Valid prediction for GeneMark_model.32756_t
Couldn't classify 167898, 168233
Sorry, prediction pasa_asmbl_50265.p1 fails validation.
(CAA)	 TC	167898-168233	TC	CCT
Valid prediction for GeneMark_model.32735_t
Valid prediction for GeneMark_model.32733_t
Valid prediction for Augustus_model.g13040.t1
Valid prediction for GeneMark_model.32773_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 27728, rend_intergenic: 12337  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40100, rend_intergenic: 28587  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59412, rend_intergenic: 53055  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 87081, rend_intergenic: 84367  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98204, rend_intergenic: 88007  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100252, rend_intergenic: 99999  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108850, rend_intergenic: 100340  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111980, rend_intergenic: 108856  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136712, rend_intergenic: 112320  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145901, rend_intergenic: 137421  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149724, rend_intergenic: 148615  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150357, rend_intergenic: 149735  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154472, rend_intergenic: 150488  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158732, rend_intergenic: 155444  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174989, rend_intergenic: 171842  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 178977
-exon list size: 804


building trellis

0.1    
0.2    
0.4    
0.5    
0.6    
0.7    
0.9    
1.0    
1.1    
1.2    
1.4    
1.5    
1.6    
1.7    
1.9    
2.0    
2.1    
2.2    
2.4    
2.5    
2.6    
2.7    
2.9    
3.0    
3.1    
3.2    
3.3    
3.5    
3.6    
3.7    
3.8    
4.0    
4.1    
4.2    
4.3    
4.5    
4.6    
4.7    
4.8    
5.0    
5.1    
5.2    
5.3    
5.5    
5.6    
5.7    
5.8    
6.0    
6.1    
6.2    
6.3    
6.5    
6.6    
6.7    
6.8    
6.9    
7.1    
7.2    
7.3    
7.4    
7.6    
7.7    
7.8    
7.9    
8.1    
8.2    
8.3    
8.4    
8.6    
8.7    
8.8    
8.9    
9.1    
9.2    
9.3    
9.4    
9.6    
9.7    
9.8    
9.9    
10.0    
10.2    
10.3    
10.4    
10.5    
10.7    
10.8    
10.9    
11.0    
11.2    
11.3    
11.4    
11.5    
11.7    
11.8    
11.9    
12.0    
12.2    
12.3    
12.4    
12.5    
12.7    
12.8    
12.9    
13.0    
13.2    
13.3    
13.4    
13.5    
13.6    
13.8    
13.9    
14.0    
14.1    
14.3    
14.4    
14.5    
14.6    
14.8    
14.9    
15.0    
15.1    
15.3    
15.4    
15.5    
15.6    
15.8    
15.9    
16.0    
16.1    
16.3    
16.4    
16.5    
16.6    
16.7    
16.9    
17.0    
17.1    
17.2    
17.4    
17.5    
17.6    
17.7    
17.9    
18.0    
18.1    
18.2    
18.4    
18.5    
18.6    
18.7    
18.9    
19.0    
19.1    
19.2    
19.4    
19.5    
19.6    
19.7    
19.9    
20.0    
20.1    
20.2    
20.3    
20.5    
20.6    
20.7    
20.8    
21.0    
21.1    
21.2    
21.3    
21.5    
21.6    
21.7    
21.8    
22.0    
22.1    
22.2    
22.3    
22.5    
22.6    
22.7    
22.8    
23.0    
23.1    
23.2    
23.3    
23.4    
23.6    
23.7    
23.8    
23.9    
24.1    
24.2    
24.3    
24.4    
24.6    
24.7    
24.8    
24.9    
25.1    
25.2    
25.3    
25.4    
25.6    
25.7    
25.8    
25.9    
26.1    
26.2    
26.3    
26.4    
26.6    
26.7    
26.8    
26.9    
27.0    
27.2    
27.3    
27.4    
27.5    
27.7    
27.8    
27.9    
28.0    
28.2    
28.3    
28.4    
28.5    
28.7    
28.8    
28.9    
29.0    
29.2    
29.3    
29.4    
29.5    
29.7    
29.8    
29.9    
30.0    
30.1    
30.3    
30.4    
30.5    
30.6    
30.8    
30.9    
31.0    
31.1    
31.3    
31.4    
31.5    
31.6    
31.8    
31.9    
32.0    
32.1    
32.3    
32.4    
32.5    
32.6    
32.8    
32.9    
33.0    
33.1    
33.3    
33.4    
33.5    
33.6    
33.7    
33.9    
34.0    
34.1    
34.2    
34.4    
34.5    
34.6    
34.7    
34.9    
35.0    
35.1    
35.2    
35.4    
35.5    
35.6    
35.7    
35.9    
36.0    
36.1    
36.2    
36.4    
36.5    
36.6    
36.7    
36.8    
37.0    
37.1    
37.2    
37.3    
37.5    
37.6    
37.7    
37.8    
38.0    
38.1    
38.2    
38.3    
38.5    
38.6    
38.7    
38.8    
39.0    
39.1    
39.2    
39.3    
39.5    
39.6    
39.7    
39.8    
40.0    
40.1    
40.2    
40.3    
40.4    
40.6    
40.7    
40.8    
40.9    
41.1    
41.2    
41.3    
41.4    
41.6    
41.7    
41.8    
41.9    
42.1    
42.2    
42.3    
42.4    
42.6    
42.7    
42.8    
42.9    
43.1    
43.2    
43.3    
43.4    
43.5    
43.7    
43.8    
43.9    
44.0    
44.2    
44.3    
44.4    
44.5    
44.7    
44.8    
44.9    
45.0    
45.2    
45.3    
45.4    
45.5    
45.7    
45.8    
45.9    
46.0    
46.2    
46.3    
46.4    
46.5    
46.7    
46.8    
46.9    
47.0    
47.1    
47.3    
47.4    
47.5    
47.6    
47.8    
47.9    
48.0    
48.1    
48.3    
48.4    
48.5    
48.6    
48.8    
48.9    
49.0    
49.1    
49.3    
49.4    
49.5    
49.6    
49.8    
49.9    
50.0    
50.1    
50.2    
50.4    
50.5    
50.6    
50.7    
50.9    
51.0    
51.1    
51.2    
51.4    
51.5    
51.6    
51.7    
51.9    
52.0    
52.1    
52.2    
52.4    
52.5    
52.6    
52.7    
52.9    
53.0    
53.1    
53.2    
53.3    
53.5    
53.6    
53.7    
53.8    
54.0    
54.1    
54.2    
54.3    
54.5    
54.6    
54.7    
54.8    
55.0    
55.1    
55.2    
55.3    
55.5    
55.6    
55.7    
55.8    
56.0    
56.1    
56.2    
56.3    
56.5    
56.6    
56.7    
56.8    
56.9    
57.1    
57.2    
57.3    
57.4    
57.6    
57.7    
57.8    
57.9    
58.1    
58.2    
58.3    
58.4    
58.6    
58.7    
58.8    
58.9    
59.1    
59.2    
59.3    
59.4    
59.6    
59.7    
59.8    
59.9    
60.0    
60.2    
60.3    
60.4    
60.5    
60.7    
60.8    
60.9    
61.0    
61.2    
61.3    
61.4    
61.5    
61.7    
61.8    
61.9    
62.0    
62.2    
62.3    
62.4    
62.5    
62.7    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.5    
63.6    
63.8    
63.9    
64.0    
64.1    
64.3    
64.4    
64.5    
64.6    
64.8    
64.9    
65.0    
65.1    
65.3    
65.4    
65.5    
65.6    
65.8    
65.9    
66.0    
66.1    
66.3    
66.4    
66.5    
66.6    
66.7    
66.9    
67.0    
67.1    
67.2    
67.4    
67.5    
67.6    
67.7    
67.9    
68.0    
68.1    
68.2    
68.4    
68.5    
68.6    
68.7    
68.9    
69.0    
69.1    
69.2    
69.4    
69.5    
69.6    
69.7    
69.9    
70.0    
70.1    
70.2    
70.3    
70.5    
70.6    
70.7    
70.8    
71.0    
71.1    
71.2    
71.3    
71.5    
71.6    
71.7    
71.8    
72.0    
72.1    
72.2    
72.3    
72.5    
72.6    
72.7    
72.8    
73.0    
73.1    
73.2    
73.3    
73.4    
73.6    
73.7    
73.8    
73.9    
74.1    
74.2    
74.3    
74.4    
74.6    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.4    
75.6    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.4    
76.6    
76.7    
76.8    
76.9    
77.0    
77.2    
77.3    
77.4    
77.5    
77.7    
77.8    
77.9    
78.0    
78.2    
78.3    
78.4    
78.5    
78.7    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.5    
79.7    
79.8    
79.9    
80.0    
80.1    
80.3    
80.4    
80.5    
80.6    
80.8    
80.9    
81.0    
81.1    
81.3    
81.4    
81.5    
81.6    
81.8    
81.9    
82.0    
82.1    
82.3    
82.4    
82.5    
82.6    
82.8    
82.9    
83.0    
83.1    
83.3    
83.4    
83.5    
83.6    
83.7    
83.9    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.7    
84.9    
85.0    
85.1    
85.2    
85.4    
85.5    
85.6    
85.7    
85.9    
86.0    
86.1    
86.2    
86.4    
86.5    
86.6    
86.7    
86.8    
87.0    
87.1    
87.2    
87.3    
87.5    
87.6    
87.7    
87.8    
88.0    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.8    
89.0    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.8    
90.0    
90.1    
90.2    
90.3    
90.4    
90.6    
90.7    
90.8    
90.9    
91.1    
91.2    
91.3    
91.4    
91.6    
91.7    
91.8    
91.9    
92.1    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
92.9    
93.1    
93.2    
93.3    
93.4    
93.5    
93.7    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.5    
94.7    
94.8    
94.9    
95.0    
95.2    
95.3    
95.4    
95.5    
95.7    
95.8    
95.9    
96.0    
96.2    
96.3    
96.4    
96.5    
96.7    
96.8    
96.9    
97.0    
97.1    
97.3    
97.4    
97.5    
97.6    
97.8    
97.9    
98.0    
98.1    
98.3    
98.4    
98.5    
98.6    
98.8    
98.9    
99.0    
99.1    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 25 predictions from path traversal
Error with prediction: snap lend_intergenic: 27728, rend_intergenic: 12337  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40100, rend_intergenic: 28587  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59412, rend_intergenic: 53055  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 87081, rend_intergenic: 84367  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98204, rend_intergenic: 88007  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100252, rend_intergenic: 99999  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108850, rend_intergenic: 100340  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111980, rend_intergenic: 108856  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136712, rend_intergenic: 112320  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145901, rend_intergenic: 137421  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149724, rend_intergenic: 148615  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150357, rend_intergenic: 149735  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154472, rend_intergenic: 150488  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158732, rend_intergenic: 155444  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174989, rend_intergenic: 171842  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 17 predictions persist after filtering for low support