-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_7/scaffold_7_17455619-17700210

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for pasa_asmbl_51373.p1
Valid prediction for snap_scaffold_7-snap.3413-T1
Valid prediction for GlimmerHMM_glimmerT_19281-T1
Valid prediction for snap_scaffold_7-snap.3383-T1
Valid prediction for GlimmerHMM_glimmerT_19274-T1
Valid prediction for GeneMark_model.32607_t
Valid prediction for GlimmerHMM_glimmerT_19292-T1
Valid prediction for GeneMark_model.32628_t
Couldn't classify 164577, 165086
Sorry, prediction pasa_asmbl_51371.p1 fails validation.
(TGC)	 CG	164577-165086	CA	AGC
Valid prediction for GlimmerHMM_glimmerT_19285-T1
Valid prediction for snap_scaffold_7-snap.3386-T1
Valid prediction for snap_scaffold_7-snap.3375-T1
Valid prediction for GeneMark_model.32652_t
Valid prediction for GlimmerHMM_glimmerT_19288-T1
Valid prediction for GlimmerHMM_glimmerT_19287-T1
Valid prediction for GeneMark_model.32658_t
Valid prediction for GeneMark_model.32638_t
Valid prediction for GeneMark_model.32632_t
Valid prediction for GeneMark_model.32644_t
Valid prediction for snap_scaffold_7-snap.3395-T1
Valid prediction for GeneMark_model.32619_t
Valid prediction for GlimmerHMM_glimmerT_19301-T1
Valid prediction for snap_scaffold_7-snap.3384-T1
Valid prediction for GeneMark_model.32653_t
Valid prediction for GeneMark_model.32611_t
Valid prediction for GlimmerHMM_glimmerT_19297-T1
Valid prediction for GeneMark_model.32645_t
Valid prediction for GlimmerHMM_glimmerT_19294-T1
Valid prediction for GlimmerHMM_glimmerT_19306-T1
Valid prediction for snap_scaffold_7-snap.3414-T1
Valid prediction for snap_scaffold_7-snap.3378-T1
Valid prediction for snap_scaffold_7-snap.3376-T1
Valid prediction for HiQ_model.g13016.t1
Valid prediction for GlimmerHMM_glimmerT_19299-T1
Valid prediction for snap_scaffold_7-snap.3380-T1
Valid prediction for GlimmerHMM_glimmerT_19278-T1
Valid prediction for GeneMark_model.32636_t
Valid prediction for GeneMark_model.32643_t
Valid prediction for snap_scaffold_7-snap.3366-T1
Valid prediction for snap_scaffold_7-snap.3417-T1
Valid prediction for snap_scaffold_7-snap.3410-T1
Valid prediction for GlimmerHMM_glimmerT_19283-T1
Valid prediction for snap_scaffold_7-snap.3399-T1
Valid prediction for snap_scaffold_7-snap.3408-T1
Valid prediction for Augustus_model.g13009.t1
Couldn't classify 145596, 145648
Couldn't classify 150800, 150843
Sorry, prediction pasa_asmbl_51367.p1 fails validation.
(CGT)	 GT	145596-145648	GT	AAG
(GTG)	 AG	148430-148560	GT	AGG
(ATC)	 AG	148798-148917	GT	AGG
(CGG)	 AG	150800-150843	TG	GCT
-recovered pasa_asmbl_51367.p1, internal, 148430, 148560
-recovered pasa_asmbl_51367.p1, internal, 148798, 148917
Valid prediction for snap_scaffold_7-snap.3421-T1
Valid prediction for Augustus_model.g13010.t1
Valid prediction for GeneMark_model.32656_t
Valid prediction for GeneMark_model.32620_t
Valid prediction for GeneMark_model.32613_t
Valid prediction for GeneMark_model.32616_t
Valid prediction for snap_scaffold_7-snap.3370-T1
Valid prediction for snap_scaffold_7-snap.3412-T1
Valid prediction for GeneMark_model.32598_t
Valid prediction for GeneMark_model.32647_t
Valid prediction for GlimmerHMM_glimmerT_19295-T1
Valid prediction for Augustus_model.g13013.t1
Valid prediction for GeneMark_model.32626_t
Valid prediction for snap_scaffold_7-snap.3391-T1
Valid prediction for GeneMark_model.32602_t
Valid prediction for GeneMark_model.32649_t
Couldn't classify 151522, 151630
Couldn't classify 157360, 157472
Sorry, prediction pasa_asmbl_51370.p1 fails validation.
(GAC)	 TA	151522-151630	GT	AGG
(ACG)	 AG	151982-152095	GT	CAG
(ATA)	 AG	153104-153150	GT	AGG
(GAC)	 AG	153583-153756	GT	AGG
(CTG)	 AG	153860-154010	GT	AGG
(TGA)	 AG	155175-155339	GT	GAG
(ACA)	 AG	156609-156722	GT	CAG
(ACA)	 AG	156964-157077	GT	TCG
(GTG)	 AG	157360-157472	GG	TAG
-recovered pasa_asmbl_51370.p1, internal, 151982, 152095
-recovered pasa_asmbl_51370.p1, internal, 153104, 153150
-recovered pasa_asmbl_51370.p1, internal, 153583, 153756
-recovered pasa_asmbl_51370.p1, internal, 153860, 154010
-recovered pasa_asmbl_51370.p1, internal, 155175, 155339
-recovered pasa_asmbl_51370.p1, internal, 156609, 156722
-recovered pasa_asmbl_51370.p1, internal, 156964, 157077
Valid prediction for snap_scaffold_7-snap.3422-T1
Valid prediction for snap_scaffold_7-snap.3397-T1
Valid prediction for Augustus_model.g13008.t1
Valid prediction for snap_scaffold_7-snap.3400-T1
Valid prediction for snap_scaffold_7-snap.3373-T1
Valid prediction for GlimmerHMM_glimmerT_19296-T1
Valid prediction for snap_scaffold_7-snap.3388-T1
Valid prediction for GlimmerHMM_glimmerT_19290-T1
Valid prediction for GeneMark_model.32624_t
Valid prediction for GeneMark_model.32639_t
Valid prediction for snap_scaffold_7-snap.3393-T1
Valid prediction for GeneMark_model.32622_t
Valid prediction for GeneMark_model.32604_t
Valid prediction for snap_scaffold_7-snap.3367-T1
Valid prediction for GeneMark_model.32634_t
Valid prediction for snap_scaffold_7-snap.3419-T1
Valid prediction for Augustus_model.g13012.t1
Valid prediction for snap_scaffold_7-snap.3392-T1
Valid prediction for GeneMark_model.32617_t
Valid prediction for GeneMark_model.32641_t
Valid prediction for GlimmerHMM_glimmerT_19286-T1
Valid prediction for GlimmerHMM_glimmerT_19271-T1
Valid prediction for CodingQuarry_transcript_57600-T1
Valid prediction for GlimmerHMM_glimmerT_19289-T1
Valid prediction for GlimmerHMM_glimmerT_19305-T1
Valid prediction for snap_scaffold_7-snap.3402-T1
Valid prediction for GeneMark_model.32600_t
Valid prediction for GlimmerHMM_glimmerT_19304-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g13006.t1
Valid prediction for GlimmerHMM_glimmerT_19284-T1
Valid prediction for GlimmerHMM_glimmerT_19293-T1
Valid prediction for HiQ_model.g13015.t1
Valid prediction for Augustus_model.g13011.t1
Valid prediction for GlimmerHMM_glimmerT_19273-T1
Valid prediction for GeneMark_model.32601_t
Valid prediction for GeneMark_model.32609_t
Valid prediction for GeneMark_model.32614_t
Valid prediction for GeneMark_model.32637_t
Valid prediction for GeneMark_model.32621_t
Valid prediction for GeneMark_model.32648_t
Valid prediction for GeneMark_model.32635_t
Couldn't classify 32408, 32489
Sorry, prediction pasa_asmbl_50251.p1 fails validation.
(AAC)	 TC	32408-32489	GT	TGG
(GTT)	 AG	32625-32726	GT	AGG
(GAG)	 AG	32834-32984	GT	AGG
(GTA)	 AG	33066-33132	AA	GAA
-recovered pasa_asmbl_50251.p1, terminal, 33066, 33132
-recovered pasa_asmbl_50251.p1, internal, 32625, 32726
-recovered pasa_asmbl_50251.p1, internal, 32834, 32984
Valid prediction for GeneMark_model.32651_t
Valid prediction for GeneMark_model.32597_t
Valid prediction for GlimmerHMM_glimmerT_19275-T1
Valid prediction for snap_scaffold_7-snap.3381-T1
Valid prediction for GeneMark_model.32612_t
Valid prediction for snap_scaffold_7-snap.3398-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for Augustus_model.g13007.t1
Valid prediction for snap_scaffold_7-snap.3389-T1
Valid prediction for Augustus_model.g13005.t1
Valid prediction for GeneMark_model.32610_t
Valid prediction for GeneMark_model.32605_t
Valid prediction for GlimmerHMM_glimmerT_19272-T1
Valid prediction for snap_scaffold_7-snap.3387-T1
Valid prediction for GlimmerHMM_glimmerT_19300-T1
Valid prediction for snap_scaffold_7-snap.3407-T1
Valid prediction for snap_scaffold_7-snap.3382-T1
Valid prediction for snap_scaffold_7-snap.3418-T1
Valid prediction for GeneMark_model.32606_t
Valid prediction for GeneMark_model.32654_t
Valid prediction for snap_scaffold_7-snap.3365-T1
Valid prediction for snap_scaffold_7-snap.3406-T1
Valid prediction for GeneMark_model.32603_t
Valid prediction for snap_scaffold_7-snap.3405-T1
Valid prediction for GeneMark_model.32623_t
Valid prediction for snap_scaffold_7-snap.3404-T1
Valid prediction for GeneMark_model.32631_t
Valid prediction for snap_scaffold_7-snap.3379-T1
Valid prediction for snap_scaffold_7-snap.3394-T1
Valid prediction for GlimmerHMM_glimmerT_19282-T1
Valid prediction for CodingQuarry_transcript_57598-T1
Valid prediction for GlimmerHMM_glimmerT_19280-T1
Valid prediction for GeneMark_model.32599_t
Valid prediction for GeneMark_model.32640_t
Valid prediction for CodingQuarry_transcript_57599-T1
Valid prediction for GlimmerHMM_glimmerT_19277-T1
Valid prediction for snap_scaffold_7-snap.3416-T1
Valid prediction for GlimmerHMM_glimmerT_19276-T1
Valid prediction for snap_scaffold_7-snap.3420-T1
Valid prediction for GlimmerHMM_glimmerT_19298-T1
Valid prediction for snap_scaffold_7-snap.3401-T1
Valid prediction for GeneMark_model.32646_t
Valid prediction for pasa_asmbl_50252.p1
Valid prediction for GeneMark_model.32642_t
Valid prediction for snap_scaffold_7-snap.3396-T1
Valid prediction for snap_scaffold_7-snap.3390-T1
Valid prediction for snap_scaffold_7-snap.3409-T1
Valid prediction for snap_scaffold_7-snap.3371-T1
Valid prediction for GeneMark_model.32650_t
Valid prediction for snap_scaffold_7-snap.3403-T1
Valid prediction for GeneMark_model.32630_t
Valid prediction for GlimmerHMM_glimmerT_19279-T1
Valid prediction for snap_scaffold_7-snap.3372-T1
Valid prediction for GeneMark_model.32618_t
Valid prediction for snap_scaffold_7-snap.3377-T1
Valid prediction for snap_scaffold_7-snap.3374-T1
Valid prediction for GeneMark_model.32625_t
Valid prediction for snap_scaffold_7-snap.3368-T1
Valid prediction for snap_scaffold_7-snap.3369-T1
Valid prediction for GlimmerHMM_glimmerT_19302-T1
Valid prediction for GlimmerHMM_glimmerT_19291-T1
Valid prediction for GeneMark_model.32657_t
Valid prediction for GeneMark_model.32629_t
Valid prediction for GeneMark_model.32627_t
Valid prediction for GeneMark_model.32633_t
Valid prediction for Augustus_model.g13014.t1
Valid prediction for snap_scaffold_7-snap.3385-T1
Valid prediction for snap_scaffold_7-snap.3423-T1
Valid prediction for GeneMark_model.32655_t
Valid prediction for GeneMark_model.32608_t
Valid prediction for snap_scaffold_7-snap.3411-T1
Valid prediction for GlimmerHMM_glimmerT_19303-T1
Valid prediction for snap_scaffold_7-snap.3415-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 4385, rend_intergenic: 3396  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 13552, rend_intergenic: 9309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21599, rend_intergenic: 19328  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28969, rend_intergenic: 24522  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43003, rend_intergenic: 30635  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48674, rend_intergenic: 46276  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59158, rend_intergenic: 51079  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75216, rend_intergenic: 70566  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75552, rend_intergenic: 75439  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76794, rend_intergenic: 76394  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79734, rend_intergenic: 77018  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85875, rend_intergenic: 81074  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91746, rend_intergenic: 86508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102106, rend_intergenic: 100963  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102765, rend_intergenic: 102627  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106463, rend_intergenic: 104247  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112718, rend_intergenic: 110147  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 118269, rend_intergenic: 113771  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137391, rend_intergenic: 133886  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145696, rend_intergenic: 143419  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162039, rend_intergenic: 146400  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179031, rend_intergenic: 176692  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 180129, rend_intergenic: 179448  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186457, rend_intergenic: 184094  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190283, rend_intergenic: 188097  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 197372, rend_intergenic: 194816  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205794, rend_intergenic: 199612  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 221637, rend_intergenic: 219191  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 244592
-exon list size: 1047


building trellis

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41.7    
41.8    
41.8    
41.9    
42.0    
42.1    
42.2    
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42.8    
42.9    
43.0    
43.1    
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43.7    
43.8    
43.9    
43.9    
44.0    
44.1    
44.2    
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44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
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45.8    
45.9    
45.9    
46.0    
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46.7    
46.8    
46.9    
47.0    
47.1    
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47.3    
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47.6    
47.7    
47.8    
47.9    
48.0    
48.0    
48.1    
48.2    
48.3    
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48.6    
48.7    
48.8    
48.9    
49.0    
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49.8    
49.9    
50.0    
50.0    
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52.0    
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52.8    
52.9    
53.0    
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53.8    
53.9    
54.0    
54.1    
54.1    
54.2    
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54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
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57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
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75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
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88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
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90.6    
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90.8    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
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93.8    
93.9    
94.0    
94.1    
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94.9    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
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95.8    
95.9    
96.0    
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96.2    
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96.6    
96.7    
96.8    
96.9    
96.9    
97.0    
97.1    
97.2    
97.3    
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97.5    
97.6    
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97.9    
98.0    
98.1    
98.2    
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98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 44 predictions from path traversal
Error with prediction: snap lend_intergenic: 4385, rend_intergenic: 3396  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 13552, rend_intergenic: 9309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21599, rend_intergenic: 19328  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28969, rend_intergenic: 24522  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43003, rend_intergenic: 30635  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48674, rend_intergenic: 46276  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59158, rend_intergenic: 51079  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75216, rend_intergenic: 70566  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75552, rend_intergenic: 75439  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76794, rend_intergenic: 76394  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79734, rend_intergenic: 77018  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85875, rend_intergenic: 81074  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91746, rend_intergenic: 86508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102106, rend_intergenic: 100963  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102765, rend_intergenic: 102627  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106463, rend_intergenic: 104247  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112718, rend_intergenic: 110147  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 118269, rend_intergenic: 113771  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137391, rend_intergenic: 133886  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145696, rend_intergenic: 143419  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162039, rend_intergenic: 146400  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179031, rend_intergenic: 176692  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 180129, rend_intergenic: 179448  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186457, rend_intergenic: 184094  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190283, rend_intergenic: 188097  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 197372, rend_intergenic: 194816  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205794, rend_intergenic: 199612  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 221637, rend_intergenic: 219191  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 15 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 231013 - 244592
-exon list size: 5


building trellis

14.3    
28.6    
42.9    
57.1    
71.4    
85.7    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support