-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_7/scaffold_7_16366233-16647287

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_7-snap.3130-T1
Valid prediction for GeneMark_model.32320_t
Valid prediction for GeneMark_model.32282_t
Valid prediction for snap_scaffold_7-snap.3175-T1
Valid prediction for Augustus_model.g12953.t1
Valid prediction for snap_scaffold_7-snap.3140-T1
Valid prediction for GeneMark_model.32301_t
Valid prediction for snap_scaffold_7-snap.3127-T1
Valid prediction for GeneMark_model.32340_t
Valid prediction for GeneMark_model.32287_t
Valid prediction for snap_scaffold_7-snap.3132-T1
Valid prediction for snap_scaffold_7-snap.3142-T1
Valid prediction for snap_scaffold_7-snap.3157-T1
Valid prediction for GeneMark_model.32344_t
Valid prediction for GeneMark_model.32265_t
Valid prediction for GeneMark_model.32277_t
Valid prediction for GeneMark_model.32309_t
Valid prediction for snap_scaffold_7-snap.3161-T1
Valid prediction for GeneMark_model.32333_t
Valid prediction for Augustus_model.g12952.t1
Valid prediction for GeneMark_model.32275_t
Valid prediction for snap_scaffold_7-snap.3145-T1
Valid prediction for GlimmerHMM_glimmerT_19144-T1
Valid prediction for GlimmerHMM_glimmerT_19157-T1
Valid prediction for snap_scaffold_7-snap.3139-T1
Valid prediction for GeneMark_model.32339_t
Valid prediction for GeneMark_model.32337_t
Valid prediction for GlimmerHMM_glimmerT_19153-T1
Valid prediction for GeneMark_model.32316_t
Valid prediction for GeneMark_model.32342_t
Valid prediction for GlimmerHMM_glimmerT_19158-T1
Valid prediction for snap_scaffold_7-snap.3125-T1
Valid prediction for GlimmerHMM_glimmerT_19148-T1
Valid prediction for GeneMark_model.32289_t
Valid prediction for snap_scaffold_7-snap.3152-T1
Valid prediction for GlimmerHMM_glimmerT_19154-T1
Valid prediction for GlimmerHMM_glimmerT_19151-T1
Valid prediction for snap_scaffold_7-snap.3135-T1
Valid prediction for GeneMark_model.32346_t
Valid prediction for snap_scaffold_7-snap.3160-T1
Valid prediction for snap_scaffold_7-snap.3129-T1
Valid prediction for GeneMark_model.32352_t
Valid prediction for snap_scaffold_7-snap.3146-T1
Valid prediction for GlimmerHMM_glimmerT_19139-T1
Valid prediction for GlimmerHMM_glimmerT_19138-T1
Valid prediction for GeneMark_model.32329_t
Valid prediction for snap_scaffold_7-snap.3168-T1
Valid prediction for GeneMark_model.32304_t
Valid prediction for GeneMark_model.32311_t
Valid prediction for GeneMark_model.32338_t
Valid prediction for GlimmerHMM_glimmerT_19143-T1
Valid prediction for GeneMark_model.32279_t
Valid prediction for GeneMark_model.32322_t
Valid prediction for GeneMark_model.32292_t
Valid prediction for GeneMark_model.32269_t
Valid prediction for GeneMark_model.32284_t
Valid prediction for GeneMark_model.32262_t
Valid prediction for GeneMark_model.32290_t
Valid prediction for GeneMark_model.32303_t
Valid prediction for GlimmerHMM_glimmerT_19147-T1
Valid prediction for GeneMark_model.32273_t
Valid prediction for GeneMark_model.32336_t
Valid prediction for snap_scaffold_7-snap.3143-T1
Valid prediction for snap_scaffold_7-snap.3171-T1
Valid prediction for snap_scaffold_7-snap.3138-T1
Valid prediction for snap_scaffold_7-snap.3170-T1
Valid prediction for GeneMark_model.32294_t
Valid prediction for GlimmerHMM_glimmerT_19136-T1
Valid prediction for GeneMark_model.32331_t
Valid prediction for GeneMark_model.32319_t
Valid prediction for GeneMark_model.32314_t
Valid prediction for Augustus_model.g12956.t1
Valid prediction for snap_scaffold_7-snap.3163-T1
Valid prediction for Augustus_model.g12954.t1
Valid prediction for GeneMark_model.32341_t
Valid prediction for snap_scaffold_7-snap.3123-T1
Valid prediction for GeneMark_model.32345_t
Valid prediction for snap_scaffold_7-snap.3154-T1
Valid prediction for GeneMark_model.32326_t
Valid prediction for snap_scaffold_7-snap.3172-T1
Valid prediction for GeneMark_model.32300_t
Valid prediction for GeneMark_model.32324_t
Valid prediction for GlimmerHMM_glimmerT_19152-T1
Valid prediction for GeneMark_model.32286_t
Valid prediction for GeneMark_model.32313_t
Valid prediction for GeneMark_model.32298_t
Valid prediction for snap_scaffold_7-snap.3150-T1
Valid prediction for GlimmerHMM_glimmerT_19156-T1
Valid prediction for snap_scaffold_7-snap.3166-T1
Valid prediction for GeneMark_model.32347_t
Valid prediction for GeneMark_model.32297_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_19146-T1
Valid prediction for GlimmerHMM_glimmerT_19140-T1
Valid prediction for GlimmerHMM_glimmerT_19141-T1
Valid prediction for GeneMark_model.32330_t
Valid prediction for snap_scaffold_7-snap.3153-T1
Valid prediction for Augustus_model.g12957.t1
Valid prediction for snap_scaffold_7-snap.3136-T1
Valid prediction for GeneMark_model.32350_t
Valid prediction for snap_scaffold_7-snap.3149-T1
Valid prediction for GeneMark_model.32263_t
Valid prediction for GeneMark_model.32325_t
Valid prediction for GeneMark_model.32270_t
Valid prediction for GeneMark_model.32302_t
Valid prediction for GeneMark_model.32334_t
Valid prediction for GeneMark_model.32323_t
Valid prediction for GeneMark_model.32306_t
Valid prediction for GlimmerHMM_glimmerT_19135-T1
Valid prediction for snap_scaffold_7-snap.3124-T1
Valid prediction for snap_scaffold_7-snap.3133-T1
Valid prediction for GeneMark_model.32335_t
Valid prediction for GeneMark_model.32274_t
Valid prediction for snap_scaffold_7-snap.3134-T1
Valid prediction for GeneMark_model.32293_t
Valid prediction for GlimmerHMM_glimmerT_19145-T1
Valid prediction for GeneMark_model.32260_t
Valid prediction for snap_scaffold_7-snap.3128-T1
Valid prediction for GeneMark_model.32280_t
Valid prediction for GeneMark_model.32328_t
Valid prediction for GeneMark_model.32317_t
Valid prediction for GeneMark_model.32288_t
Valid prediction for GeneMark_model.32283_t
Valid prediction for snap_scaffold_7-snap.3137-T1
Valid prediction for snap_scaffold_7-snap.3164-T1
Valid prediction for snap_scaffold_7-snap.3158-T1
Valid prediction for GeneMark_model.32318_t
Valid prediction for snap_scaffold_7-snap.3144-T1
Valid prediction for GeneMark_model.32281_t
Valid prediction for GeneMark_model.32312_t
Valid prediction for GeneMark_model.32267_t
Valid prediction for GeneMark_model.32343_t
Valid prediction for GeneMark_model.32348_t
Valid prediction for GeneMark_model.32310_t
Valid prediction for GlimmerHMM_glimmerT_19149-T1
Valid prediction for snap_scaffold_7-snap.3155-T1
Valid prediction for GlimmerHMM_glimmerT_19155-T1
Valid prediction for GeneMark_model.32299_t
Valid prediction for snap_scaffold_7-snap.3169-T1
Valid prediction for snap_scaffold_7-snap.3131-T1
Valid prediction for snap_scaffold_7-snap.3176-T1
Valid prediction for GeneMark_model.32295_t
Valid prediction for GeneMark_model.32278_t
Valid prediction for snap_scaffold_7-snap.3156-T1
Valid prediction for GeneMark_model.32332_t
Valid prediction for GeneMark_model.32285_t
Valid prediction for snap_scaffold_7-snap.3126-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for GeneMark_model.32272_t
Valid prediction for snap_scaffold_7-snap.3167-T1
Valid prediction for GeneMark_model.32321_t
Valid prediction for GeneMark_model.32308_t
Valid prediction for snap_scaffold_7-snap.3159-T1
Valid prediction for snap_scaffold_7-snap.3165-T1
Valid prediction for GeneMark_model.32349_t
Valid prediction for GeneMark_model.32268_t
Valid prediction for GeneMark_model.32296_t
Valid prediction for snap_scaffold_7-snap.3174-T1
Valid prediction for snap_scaffold_7-snap.3148-T1
Valid prediction for GeneMark_model.32271_t
Valid prediction for snap_scaffold_7-snap.3151-T1
Valid prediction for GlimmerHMM_glimmerT_19142-T1
Valid prediction for snap_scaffold_7-snap.3141-T1
Valid prediction for GlimmerHMM_glimmerT_19137-T1
Valid prediction for GlimmerHMM_glimmerT_19150-T1
Valid prediction for snap_scaffold_7-snap.3162-T1
Valid prediction for snap_scaffold_7-snap.3147-T1
Valid prediction for GeneMark_model.32264_t
Valid prediction for Augustus_model.g12955.t1
Valid prediction for GeneMark_model.32261_t
Valid prediction for GeneMark_model.32291_t
Valid prediction for GeneMark_model.32305_t
Valid prediction for GeneMark_model.32315_t
Valid prediction for snap_scaffold_7-snap.3173-T1
Valid prediction for snap_scaffold_7-snap.3178-T1
Valid prediction for GeneMark_model.32276_t
Valid prediction for GeneMark_model.32327_t
Valid prediction for GeneMark_model.32353_t
Valid prediction for snap_scaffold_7-snap.3177-T1
Valid prediction for snap_scaffold_7-snap.3179-T1
Valid prediction for GeneMark_model.32266_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 5256, rend_intergenic: 1656  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20020, rend_intergenic: 9752  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49235, rend_intergenic: 35589  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59958, rend_intergenic: 49595  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67709, rend_intergenic: 60603  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71325, rend_intergenic: 67790  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80704, rend_intergenic: 71550  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103803, rend_intergenic: 87090  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119539, rend_intergenic: 104060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124377, rend_intergenic: 124084  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 126533, rend_intergenic: 125666  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135593, rend_intergenic: 132794  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139582, rend_intergenic: 136486  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149264, rend_intergenic: 140832  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154932, rend_intergenic: 149565  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166002, rend_intergenic: 155282  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173915, rend_intergenic: 168540  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176736, rend_intergenic: 174239  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177085, rend_intergenic: 176793  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 183037, rend_intergenic: 179149  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193993, rend_intergenic: 185670  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 201899, rend_intergenic: 199128  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215630, rend_intergenic: 210663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217642, rend_intergenic: 215779  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 235883, rend_intergenic: 233114  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 238669, rend_intergenic: 235995  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 242973, rend_intergenic: 238771  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 252761, rend_intergenic: 245963  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 266423, rend_intergenic: 264703  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 281055
-exon list size: 1043


building trellis

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54.3    
54.4    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 63 predictions from path traversal
Error with prediction: snap lend_intergenic: 5256, rend_intergenic: 1656  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20020, rend_intergenic: 9752  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49235, rend_intergenic: 35589  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59958, rend_intergenic: 49595  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67709, rend_intergenic: 60603  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71325, rend_intergenic: 67790  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80704, rend_intergenic: 71550  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103803, rend_intergenic: 87090  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119539, rend_intergenic: 104060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124377, rend_intergenic: 124084  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 126533, rend_intergenic: 125666  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135593, rend_intergenic: 132794  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139582, rend_intergenic: 136486  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149264, rend_intergenic: 140832  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154932, rend_intergenic: 149565  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166002, rend_intergenic: 155282  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173915, rend_intergenic: 168540  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176736, rend_intergenic: 174239  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177085, rend_intergenic: 176793  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 183037, rend_intergenic: 179149  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193993, rend_intergenic: 185670  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 201899, rend_intergenic: 199128  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215630, rend_intergenic: 210663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217642, rend_intergenic: 215779  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 235883, rend_intergenic: 233114  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 238669, rend_intergenic: 235995  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 242973, rend_intergenic: 238771  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 252761, rend_intergenic: 245963  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 266423, rend_intergenic: 264703  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 15 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 12194
-exon list size: 44


building trellis

2.2    
4.3    
6.5    
8.7    
10.9    
13.0    
15.2    
17.4    
19.6    
21.7    
23.9    
26.1    
28.3    
30.4    
32.6    
34.8    
37.0    
39.1    
41.3    
43.5    
45.7    
47.8    
50.0    
52.2    
54.3    
56.5    
58.7    
60.9    
63.0    
65.2    
67.4    
69.6    
71.7    
73.9    
76.1    
78.3    
80.4    
82.6    
84.8    
87.0    
89.1    
91.3    
93.5    
95.7    
97.8    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 10832
-exon list size: 35


building trellis

2.7    
5.4    
8.1    
10.8    
13.5    
16.2    
18.9    
21.6    
24.3    
27.0    
29.7    
32.4    
35.1    
37.8    
40.5    
43.2    
45.9    
48.6    
51.4    
54.1    
56.8    
59.5    
62.2    
64.9    
67.6    
70.3    
73.0    
75.7    
78.4    
81.1    
83.8    
86.5    
89.2    
91.9    
94.6    
97.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 10339
-exon list size: 34


building trellis

2.8    
5.6    
8.3    
11.1    
13.9    
16.7    
19.4    
22.2    
25.0    
27.8    
30.6    
33.3    
36.1    
38.9    
41.7    
44.4    
47.2    
50.0    
52.8    
55.6    
58.3    
61.1    
63.9    
66.7    
69.4    
72.2    
75.0    
77.8    
80.6    
83.3    
86.1    
88.9    
91.7    
94.4    
97.2    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 267577 - 281055
-exon list size: 30


building trellis

3.1    
6.2    
9.4    
12.5    
15.6    
18.8    
21.9    
25.0    
28.1    
31.2    
34.4    
37.5    
40.6    
43.8    
46.9    
50.0    
53.1    
56.2    
59.4    
62.5    
65.6    
68.8    
71.9    
75.0    
78.1    
81.2    
84.4    
87.5    
90.6    
93.8    
96.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 267577 - 278203
-exon list size: 24


building trellis

3.8    
7.7    
11.5    
15.4    
19.2    
23.1    
26.9    
30.8    
34.6    
38.5    
42.3    
46.2    
50.0    
53.8    
57.7    
61.5    
65.4    
69.2    
73.1    
76.9    
80.8    
84.6    
88.5    
92.3    
96.2    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 267577 - 278153
-exon list size: 23


building trellis

4.0    
8.0    
12.0    
16.0    
20.0    
24.0    
28.0    
32.0    
36.0    
40.0    
44.0    
48.0    
52.0    
56.0    
60.0    
64.0    
68.0    
72.0    
76.0    
80.0    
84.0    
88.0    
92.0    
96.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 267577 - 278110
-exon list size: 22


building trellis

4.2    
8.3    
12.5    
16.7    
20.8    
25.0    
29.2    
33.3    
37.5    
41.7    
45.8    
50.0    
54.2    
58.3    
62.5    
66.7    
70.8    
75.0    
79.2    
83.3    
87.5    
91.7    
95.8    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 267577 - 278082
-exon list size: 21


building trellis

4.3    
8.7    
13.0    
17.4    
21.7    
26.1    
30.4    
34.8    
39.1    
43.5    
47.8    
52.2    
56.5    
60.9    
65.2    
69.6    
73.9    
78.3    
82.6    
87.0    
91.3    
95.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support