-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_7/scaffold_7_14444989-14695217

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.31753_t
Valid prediction for GlimmerHMM_glimmerT_18935-T1
Valid prediction for GlimmerHMM_glimmerT_18930-T1
Valid prediction for GeneMark_model.31769_t
Valid prediction for Augustus_model.g12815.t1
Valid prediction for Augustus_model.g12800.t1
Valid prediction for GeneMark_model.31759_t
Valid prediction for GeneMark_model.31747_t
Valid prediction for Augustus_model.g12816.t1
Valid prediction for snap_scaffold_7-snap.2774-T1
Valid prediction for GeneMark_model.31745_t
Valid prediction for GeneMark_model.31773_t
Valid prediction for Augustus_model.g12796.t1
Valid prediction for GeneMark_model.31801_t
Valid prediction for GeneMark_model.31750_t
Valid prediction for GeneMark_model.31787_t
Valid prediction for GeneMark_model.31775_t
Valid prediction for snap_scaffold_7-snap.2745-T1
Valid prediction for Augustus_model.g12810.t1
Valid prediction for GeneMark_model.31777_t
Valid prediction for snap_scaffold_7-snap.2744-T1
Valid prediction for GlimmerHMM_glimmerT_18937-T1
Valid prediction for snap_scaffold_7-snap.2787-T1
Valid prediction for GeneMark_model.31763_t
Valid prediction for snap_scaffold_7-snap.2762-T1
Valid prediction for GlimmerHMM_glimmerT_18933-T1
Valid prediction for GeneMark_model.31799_t
Valid prediction for GeneMark_model.31781_t
Valid prediction for GeneMark_model.31742_t
Valid prediction for GeneMark_model.31761_t
Valid prediction for GeneMark_model.31785_t
Valid prediction for Augustus_model.g12812.t1
Valid prediction for snap_scaffold_7-snap.2770-T1
Valid prediction for GeneMark_model.31808_t
Valid prediction for GeneMark_model.31771_t
Valid prediction for GlimmerHMM_glimmerT_18924-T1
Valid prediction for Augustus_model.g12795.t1
Valid prediction for snap_scaffold_7-snap.2778-T1
Valid prediction for snap_scaffold_7-snap.2766-T1
Valid prediction for Augustus_model.g12805.t1
Valid prediction for snap_scaffold_7-snap.2747-T1
Valid prediction for GeneMark_model.31740_t
Valid prediction for GlimmerHMM_glimmerT_18940-T1
Valid prediction for GlimmerHMM_glimmerT_18944-T1
Valid prediction for GlimmerHMM_glimmerT_18945-T1
Valid prediction for GeneMark_model.31765_t
Valid prediction for Augustus_model.g12808.t1
Valid prediction for Augustus_model.g12802.t1
Valid prediction for GeneMark_model.31812_t
Valid prediction for snap_scaffold_7-snap.2783-T1
Valid prediction for GeneMark_model.31806_t
Valid prediction for snap_scaffold_7-snap.2754-T1
Valid prediction for snap_scaffold_7-snap.2779-T1
Valid prediction for GeneMark_model.31744_t
Valid prediction for snap_scaffold_7-snap.2764-T1
Valid prediction for GeneMark_model.31748_t
Valid prediction for GlimmerHMM_glimmerT_18929-T1
Valid prediction for GlimmerHMM_glimmerT_18922-T1
Valid prediction for snap_scaffold_7-snap.2742-T1
Valid prediction for GeneMark_model.31767_t
Valid prediction for GlimmerHMM_glimmerT_18947-T1
Valid prediction for snap_scaffold_7-snap.2756-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_7-snap.2752-T1
Valid prediction for snap_scaffold_7-snap.2738-T1
Valid prediction for GeneMark_model.31804_t
Valid prediction for GeneMark_model.31751_t
Valid prediction for snap_scaffold_7-snap.2785-T1
Valid prediction for snap_scaffold_7-snap.2740-T1
Valid prediction for GeneMark_model.31783_t
Valid prediction for GlimmerHMM_glimmerT_18941-T1
Valid prediction for snap_scaffold_7-snap.2769-T1
Valid prediction for GeneMark_model.31790_t
Valid prediction for GeneMark_model.31779_t
Valid prediction for Augustus_model.g12811.t1
Valid prediction for snap_scaffold_7-snap.2750-T1
Valid prediction for snap_scaffold_7-snap.2758-T1
Valid prediction for GeneMark_model.31757_t
Valid prediction for GeneMark_model.31796_t
Valid prediction for snap_scaffold_7-snap.2777-T1
Valid prediction for GeneMark_model.31749_t
Valid prediction for GeneMark_model.31793_t
Valid prediction for GeneMark_model.31810_t
Valid prediction for Augustus_model.g12807.t1
Valid prediction for snap_scaffold_7-snap.2743-T1
Valid prediction for snap_scaffold_7-snap.2771-T1
Valid prediction for GlimmerHMM_glimmerT_18925-T1
Valid prediction for GeneMark_model.31795_t
Valid prediction for snap_scaffold_7-snap.2737-T1
Valid prediction for GlimmerHMM_glimmerT_18934-T1
Valid prediction for snap_scaffold_7-snap.2749-T1
Valid prediction for GeneMark_model.31756_t
Valid prediction for GeneMark_model.31786_t
Valid prediction for snap_scaffold_7-snap.2773-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_7-snap.2757-T1
Valid prediction for Augustus_model.g12813.t1
Valid prediction for GeneMark_model.31780_t
Valid prediction for snap_scaffold_7-snap.2782-T1
Valid prediction for GeneMark_model.31764_t
Valid prediction for GeneMark_model.31772_t
Valid prediction for pasa_asmbl_50154.p1
Valid prediction for GeneMark_model.31807_t
Valid prediction for GeneMark_model.31805_t
Valid prediction for GeneMark_model.31813_t
Valid prediction for GeneMark_model.31741_t
Valid prediction for Augustus_model.g12803.t1
Couldn't classify 30437, 30817
Sorry, prediction pasa_asmbl_51282.p1 fails validation.
(ATG)	 AA	30437-30817	GG	GGG
Valid prediction for snap_scaffold_7-snap.2759-T1
Valid prediction for snap_scaffold_7-snap.2781-T1
Valid prediction for GeneMark_model.31794_t
Valid prediction for GlimmerHMM_glimmerT_18942-T1
Valid prediction for GeneMark_model.31743_t
Valid prediction for HiQ_model.g12797.t1
Valid prediction for snap_scaffold_7-snap.2784-T1
Valid prediction for GeneMark_model.31791_t
Valid prediction for Augustus_model.g12806.t1
Valid prediction for snap_scaffold_7-snap.2751-T1
Valid prediction for GlimmerHMM_glimmerT_18936-T1
Valid prediction for GeneMark_model.31754_t
Valid prediction for snap_scaffold_7-snap.2761-T1
Valid prediction for Augustus_model.g12798.t1
Valid prediction for GeneMark_model.31766_t
Valid prediction for GlimmerHMM_glimmerT_18923-T1
Valid prediction for GlimmerHMM_glimmerT_18943-T1
Valid prediction for snap_scaffold_7-snap.2748-T1
Valid prediction for Augustus_model.g12801.t1
Valid prediction for GlimmerHMM_glimmerT_18928-T1
Valid prediction for GeneMark_model.31802_t
Valid prediction for GeneMark_model.31788_t
Valid prediction for GlimmerHMM_glimmerT_18946-T1
Valid prediction for GeneMark_model.31770_t
Valid prediction for GlimmerHMM_glimmerT_18938-T1
Valid prediction for snap_scaffold_7-snap.2741-T1
Valid prediction for snap_scaffold_7-snap.2786-T1
Valid prediction for GeneMark_model.31800_t
Valid prediction for snap_scaffold_7-snap.2746-T1
Valid prediction for GlimmerHMM_glimmerT_18939-T1
Valid prediction for snap_scaffold_7-snap.2776-T1
Valid prediction for GeneMark_model.31758_t
Valid prediction for snap_scaffold_7-snap.2760-T1
Valid prediction for GeneMark_model.31809_t
Valid prediction for Augustus_model.g12804.t1
Valid prediction for GeneMark_model.31803_t
Valid prediction for GeneMark_model.31789_t
Valid prediction for snap_scaffold_7-snap.2775-T1
Valid prediction for Augustus_model.g12814.t1
Valid prediction for snap_scaffold_7-snap.2772-T1
Valid prediction for GeneMark_model.31792_t
Valid prediction for GeneMark_model.31784_t
Valid prediction for GlimmerHMM_glimmerT_18926-T1
Valid prediction for CodingQuarry_transcript_57568-T1
Valid prediction for GeneMark_model.31797_t
Valid prediction for GeneMark_model.31778_t
Valid prediction for GeneMark_model.31774_t
Valid prediction for GlimmerHMM_glimmerT_18927-T1
Valid prediction for snap_scaffold_7-snap.2755-T1
Valid prediction for GeneMark_model.31768_t
Valid prediction for GeneMark_model.31798_t
Valid prediction for GeneMark_model.31760_t
Valid prediction for GlimmerHMM_glimmerT_18931-T1
Valid prediction for GeneMark_model.31782_t
Valid prediction for Augustus_model.g12809.t1
Valid prediction for snap_scaffold_7-snap.2763-T1
Couldn't classify 147814, 147960
Sorry, prediction pasa_asmbl_50156.p1 fails validation.
(GGC)	 TA	147814-147960	GT	AGG
(GTG)	 AG	148294-148381	GT	TGG
(GCA)	 AG	149699-149817	GT	AGG
(GTT)	 AG	149940-150142	GT	AGG
(AGT)	 AG	151362-151468	GT	CTG
(TGT)	 AG	153706-153853	GT	AGG
(TGA)	 AG	154205-154410	GT	TGG
(GAC)	 AG	154645-154835	GT	CGG
(CCC)	 AG	155947-156060	GT	AGG
(GCC)	 AG	156251-156723	GT	AGG
(GTC)	 AG	156988-157078	GT	TCG
(AAT)	 AG	157210-157312	GT	AGG
(AGC)	 AG	157536-157697	GT	AGG
(GTG)	 AG	158130-158278	AC	AGA
-recovered pasa_asmbl_50156.p1, terminal, 158130, 158278
-recovered pasa_asmbl_50156.p1, internal, 148294, 148381
-recovered pasa_asmbl_50156.p1, internal, 149699, 149817
-recovered pasa_asmbl_50156.p1, internal, 149940, 150142
-recovered pasa_asmbl_50156.p1, internal, 151362, 151468
-recovered pasa_asmbl_50156.p1, internal, 153706, 153853
-recovered pasa_asmbl_50156.p1, internal, 154205, 154410
-recovered pasa_asmbl_50156.p1, internal, 154645, 154835
-recovered pasa_asmbl_50156.p1, internal, 155947, 156060
-recovered pasa_asmbl_50156.p1, internal, 156251, 156723
-recovered pasa_asmbl_50156.p1, internal, 156988, 157078
-recovered pasa_asmbl_50156.p1, internal, 157210, 157312
-recovered pasa_asmbl_50156.p1, internal, 157536, 157697
Valid prediction for snap_scaffold_7-snap.2768-T1
Valid prediction for GeneMark_model.31755_t
Valid prediction for GeneMark_model.31762_t
Valid prediction for snap_scaffold_7-snap.2753-T1
Valid prediction for GeneMark_model.31811_t
Valid prediction for snap_scaffold_7-snap.2780-T1
Valid prediction for snap_scaffold_7-snap.2765-T1
Valid prediction for snap_scaffold_7-snap.2739-T1
Valid prediction for snap_scaffold_7-snap.2767-T1
Valid prediction for Augustus_model.g12799.t1
Valid prediction for GeneMark_model.31746_t
Valid prediction for GlimmerHMM_glimmerT_18932-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 57502, rend_intergenic: 55207  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79233, rend_intergenic: 73743  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91890, rend_intergenic: 91714  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93991, rend_intergenic: 91952  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98910, rend_intergenic: 96799  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103178, rend_intergenic: 100084  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104626, rend_intergenic: 104182  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115695, rend_intergenic: 104770  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124638, rend_intergenic: 122218  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125565, rend_intergenic: 125166  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130271, rend_intergenic: 126331  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 159750, rend_intergenic: 134153  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162633, rend_intergenic: 160027  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169051, rend_intergenic: 163000  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175036, rend_intergenic: 172493  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190591, rend_intergenic: 179536  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203608, rend_intergenic: 191140  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219709, rend_intergenic: 203748  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 222188, rend_intergenic: 220067  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 238998, rend_intergenic: 228570  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 246526, rend_intergenic: 239115  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 250229
-exon list size: 923


building trellis

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57.5    
57.6    
57.7    
57.8    
57.9    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 44 predictions from path traversal
Error with prediction: snap lend_intergenic: 57502, rend_intergenic: 55207  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79233, rend_intergenic: 73743  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91890, rend_intergenic: 91714  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93991, rend_intergenic: 91952  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98910, rend_intergenic: 96799  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103178, rend_intergenic: 100084  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104626, rend_intergenic: 104182  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115695, rend_intergenic: 104770  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124638, rend_intergenic: 122218  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125565, rend_intergenic: 125166  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130271, rend_intergenic: 126331  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 159750, rend_intergenic: 134153  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162633, rend_intergenic: 160027  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169051, rend_intergenic: 163000  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175036, rend_intergenic: 172493  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190591, rend_intergenic: 179536  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203608, rend_intergenic: 191140  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219709, rend_intergenic: 203748  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 222188, rend_intergenic: 220067  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 238998, rend_intergenic: 228570  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 246526, rend_intergenic: 239115  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 17 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 34209
-exon list size: 44


building trellis

2.2    
4.3    
6.5    
8.7    
10.9    
13.0    
15.2    
17.4    
19.6    
21.7    
23.9    
26.1    
28.3    
30.4    
32.6    
34.8    
37.0    
39.1    
41.3    
43.5    
45.7    
47.8    
50.0    
52.2    
54.3    
56.5    
58.7    
60.9    
63.0    
65.2    
67.4    
69.6    
71.7    
73.9    
76.1    
78.3    
80.4    
82.6    
84.8    
87.0    
89.1    
91.3    
93.5    
95.7    
97.8    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 27976
-exon list size: 30


building trellis

3.1    
6.2    
9.4    
12.5    
15.6    
18.8    
21.9    
25.0    
28.1    
31.2    
34.4    
37.5    
40.6    
43.8    
46.9    
50.0    
53.1    
56.2    
59.4    
62.5    
65.6    
68.8    
71.9    
75.0    
78.1    
81.2    
84.4    
87.5    
90.6    
93.8    
96.9    
-found 2 predictions from path traversal
GOT 5prime partial gene.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 239623 - 250229
-exon list size: 31


building trellis

3.0    
6.1    
9.1    
12.1    
15.2    
18.2    
21.2    
24.2    
27.3    
30.3    
33.3    
36.4    
39.4    
42.4    
45.5    
48.5    
51.5    
54.5    
57.6    
60.6    
63.6    
66.7    
69.7    
72.7    
75.8    
78.8    
81.8    
84.8    
87.9    
90.9    
93.9    
97.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support