-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_674

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 3306, 3523
Sorry, prediction snap_scaffold_674-snap.1-T1 fails validation.
(CTT)	 AG	3306-3523	GT	GGG
-recovered snap_scaffold_674-snap.1-T1, internal, 3306, 3523
Couldn't classify 958, 1056
Sorry, prediction GeneMark_model.108173_t fails validation.
(AGA)	 AG	958-1056	GC	GAG
(GGA)	 AG	1100-1189	GC	GAG
(GAG)	 AG	1244-1409	AG	AGA
-recovered GeneMark_model.108173_t, terminal, 1244, 1409
-recovered GeneMark_model.108173_t, internal, 958, 1056
-recovered GeneMark_model.108173_t, internal, 1100, 1189
Valid prediction for GeneMark_model.108175_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.108174_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 5027
-exon list size: 27


building trellis

3.4    
6.9    
10.3    
13.8    
17.2    
20.7    
24.1    
27.6    
31.0    
34.5    
37.9    
41.4    
44.8    
48.3    
51.7    
55.2    
58.6    
62.1    
65.5    
69.0    
72.4    
75.9    
79.3    
82.8    
86.2    
89.7    
93.1    
96.6    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support