-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_651

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 3580, 3648
Couldn't classify 4790, 4900
Sorry, prediction snap_scaffold_651-snap.1-T1 fails validation.
(AGT)	 AG	3580-3648	GT	TAG
(GTT)	 AG	4790-4900	GT	GTG
-recovered snap_scaffold_651-snap.1-T1, internal, 3580, 3648
-recovered snap_scaffold_651-snap.1-T1, internal, 4790, 4900

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 401, 445
Sorry, prediction GeneMark_model.108132_t fails validation.
(GGG)	 AG	401-445	GT	GAG
(GAG)	 AG	1639-1683	GT	GAG
(AAT)	 AG	1705-1713	GT	GAG
(TGA)	 AG	1743-1769	GT	GAG
(AAT)	 AG	1809-1817	GT	GAG
(AAT)	 AG	1861-1869	GT	GAG
(AAT)	 AG	1937-1945	GT	GAG
(AGA)	 AG	4560-4653	AG	AGA
-recovered GeneMark_model.108132_t, terminal, 4560, 4653
-recovered GeneMark_model.108132_t, internal, 401, 445
-recovered GeneMark_model.108132_t, internal, 1639, 1683
-recovered GeneMark_model.108132_t, internal, 1705, 1713
-recovered GeneMark_model.108132_t, internal, 1743, 1769
-recovered GeneMark_model.108132_t, internal, 1809, 1817
-recovered GeneMark_model.108132_t, internal, 1861, 1869
-recovered GeneMark_model.108132_t, internal, 1937, 1945

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 5136
-exon list size: 18


building trellis

5.0    
10.0    
15.0    
20.0    
25.0    
30.0    
35.0    
40.0    
45.0    
50.0    
55.0    
60.0    
65.0    
70.0    
75.0    
80.0    
85.0    
90.0    
95.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support