-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_6/scaffold_6_9747493-9965794

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.26334_t
Valid prediction for GeneMark_model.26330_t
Valid prediction for snap_scaffold_6-snap.2125-T1
Valid prediction for CodingQuarry_transcript_55031-T1
Valid prediction for snap_scaffold_6-snap.2118-T1
Valid prediction for GlimmerHMM_glimmerT_15661-T1
Valid prediction for Augustus_model.g10467.t1
Valid prediction for GeneMark_model.26354_t
Valid prediction for GeneMark_model.26347_t
Valid prediction for Augustus_model.g10464.t1
Valid prediction for GeneMark_model.26338_t
Valid prediction for GeneMark_model.26372_t
Valid prediction for snap_scaffold_6-snap.2144-T1
Valid prediction for HiQ_model.g10471.t1
Valid prediction for GlimmerHMM_glimmerT_15664-T1
Valid prediction for CodingQuarry_transcript_55032-T1
Valid prediction for snap_scaffold_6-snap.2105-T1
Valid prediction for GlimmerHMM_glimmerT_15648-T1
Valid prediction for GeneMark_model.26343_t
Valid prediction for GlimmerHMM_glimmerT_15657-T1
Valid prediction for GeneMark_model.26352_t
Valid prediction for CodingQuarry_transcript_55034-T1
Valid prediction for snap_scaffold_6-snap.2130-T1
Valid prediction for snap_scaffold_6-snap.2116-T1
Valid prediction for snap_scaffold_6-snap.2122-T1
Valid prediction for snap_scaffold_6-snap.2098-T1
Valid prediction for GeneMark_model.26364_t
Valid prediction for snap_scaffold_6-snap.2111-T1
Valid prediction for pasa_asmbl_47179.p1
Valid prediction for GeneMark_model.26361_t
Valid prediction for Augustus_model.g10465.t1
Valid prediction for GlimmerHMM_glimmerT_15655-T1
Valid prediction for snap_scaffold_6-snap.2108-T1
Valid prediction for CodingQuarry_transcript_55037-T1
Valid prediction for pasa_asmbl_47177.p1
Valid prediction for GlimmerHMM_glimmerT_15667-T1
Valid prediction for Augustus_model.g10480.t1
Valid prediction for pasa_asmbl_47186.p1
Valid prediction for snap_scaffold_6-snap.2114-T1
Valid prediction for snap_scaffold_6-snap.2134-T1
Valid prediction for Augustus_model.g10469.t1
Valid prediction for snap_scaffold_6-snap.2121-T1
Valid prediction for Augustus_model.g10458.t1
Valid prediction for HiQ_model.g10475.t1
Valid prediction for snap_scaffold_6-snap.2115-T1
Valid prediction for GlimmerHMM_glimmerT_15647-T1
Valid prediction for snap_scaffold_6-snap.2106-T1
Valid prediction for GeneMark_model.26345_t
Valid prediction for HiQ_model.g10468.t1
Valid prediction for snap_scaffold_6-snap.2131-T1
Couldn't classify 8458, 8536
Couldn't classify 9303, 9466
Sorry, prediction pasa_asmbl_47172.p1 fails validation.
(CAC)	 CT	8458-8536	GT	TGG
(CTC)	 AG	8791-8957	GT	CGG
(GTG)	 AG	9090-9189	GT	AGG
(GAG)	 AG	9303-9466	AA	CCA
add_exon() Sorry, pasa_asmbl_47172.p1 9090-9189-terminal-3 is invalid.
-recovered pasa_asmbl_47172.p1, terminal, 9090, 9189
-recovered pasa_asmbl_47172.p1, internal, 8791, 8957
-recovered pasa_asmbl_47172.p1, internal, 9090, 9189
Valid prediction for GeneMark_model.26367_t
Valid prediction for GeneMark_model.26359_t
Valid prediction for GlimmerHMM_glimmerT_15663-T1
Valid prediction for Augustus_model.g10474.t1
Valid prediction for Augustus_model.g10466.t1
Valid prediction for GeneMark_model.26328_t
Valid prediction for snap_scaffold_6-snap.2107-T1
Couldn't classify 22432, 22586
Sorry, prediction pasa_asmbl_47175.p1 fails validation.
(ACC)	 AG	22432-22586	GT	AGG
(GAT)	 AG	22736-22825	GT	GTG
(GAT)	 AG	22931-23068	GT	AGG
(ACA)	 AG	23179-23268	GT	AGG
(GTA)	 AG	23424-23536	GT	AGG
(GGA)	 AG	24489-24569	GT	GGG
(GAG)	 AG	25269-25408	GA	AAG
-recovered pasa_asmbl_47175.p1, terminal, 23179, 23268
-recovered pasa_asmbl_47175.p1, terminal, 25269, 25408
-recovered pasa_asmbl_47175.p1, internal, 22432, 22586
-recovered pasa_asmbl_47175.p1, internal, 22736, 22825
-recovered pasa_asmbl_47175.p1, internal, 22931, 23068
-recovered pasa_asmbl_47175.p1, internal, 23179, 23268
-recovered pasa_asmbl_47175.p1, internal, 23424, 23536
-recovered pasa_asmbl_47175.p1, internal, 24489, 24569
Valid prediction for HiQ_model.g10460.t1
Valid prediction for snap_scaffold_6-snap.2123-T1
Valid prediction for GeneMark_model.26346_t
Valid prediction for GeneMark_model.26350_t
Valid prediction for snap_scaffold_6-snap.2100-T1
Couldn't classify 157605, 159053
Sorry, prediction pasa_asmbl_47182.p1 fails validation.
(CAA)	 TT	157605-159053	AG	GAA
Valid prediction for snap_scaffold_6-snap.2129-T1
Valid prediction for snap_scaffold_6-snap.2140-T1
Valid prediction for GlimmerHMM_glimmerT_15660-T1
Valid prediction for Augustus_model.g10470.t1
Valid prediction for CodingQuarry_transcript_55035-T1
Valid prediction for GeneMark_model.26342_t
Valid prediction for GlimmerHMM_glimmerT_15653-T1
Valid prediction for CodingQuarry_transcript_55030-T1
Valid prediction for GeneMark_model.26362_t
Valid prediction for snap_scaffold_6-snap.2132-T1
Valid prediction for GlimmerHMM_glimmerT_15671-T1
Valid prediction for snap_scaffold_6-snap.2119-T1
Valid prediction for snap_scaffold_6-snap.2117-T1
Valid prediction for GlimmerHMM_glimmerT_15656-T1
Valid prediction for snap_scaffold_6-snap.2142-T1
Valid prediction for snap_scaffold_6-snap.2120-T1
Valid prediction for GeneMark_model.26368_t
Valid prediction for GlimmerHMM_glimmerT_15676-T1
Valid prediction for Augustus_model.g10461.t1
Valid prediction for GlimmerHMM_glimmerT_15659-T1
Valid prediction for GlimmerHMM_glimmerT_15665-T1
Valid prediction for snap_scaffold_6-snap.2113-T1
Valid prediction for snap_scaffold_6-snap.2135-T1
Valid prediction for HiQ_model.g10463.t1
Valid prediction for CodingQuarry_transcript_55033-T1
Valid prediction for GeneMark_model.26370_t
Valid prediction for GeneMark_model.26332_t
Valid prediction for GeneMark_model.26357_t
Valid prediction for CodingQuarry_transcript_55036-T1
Valid prediction for GlimmerHMM_glimmerT_15675-T1
Valid prediction for GeneMark_model.26340_t
Valid prediction for Augustus_model.g10483.t1
Valid prediction for GlimmerHMM_glimmerT_15658-T1
Valid prediction for pasa_asmbl_47180.p1
Valid prediction for CodingQuarry_transcript_55027-T1
Valid prediction for HiQ_model.g10477.t1
Valid prediction for Augustus_model.g10482.t1
Valid prediction for GlimmerHMM_glimmerT_15654-T1
Valid prediction for GlimmerHMM_glimmerT_15645-T1
Valid prediction for snap_scaffold_6-snap.2138-T1
Couldn't classify 213435, 213550
Sorry, prediction pasa_asmbl_47192.p1 fails validation.
(ATG)	 GG	207289-207419	GT	CGG
(GAC)	 AG	207794-207999	GT	GGG
(ATG)	 AG	208531-208557	GT	AGG
(AGA)	 AG	208753-209040	GT	AGG
(CTC)	 AG	210704-210784	GT	TTG
(GTG)	 AG	211696-211806	GT	AGG
(GCT)	 AG	212037-212156	GT	AGG
(GCA)	 AG	212439-212532	GT	CGG
(GTG)	 AG	212960-213018	GT	GGG
(CTC)	 AG	213435-213550	CC	TCC
-recovered pasa_asmbl_47192.p1, initial, 207289, 207419
add_exon() Sorry, pasa_asmbl_47192.p1 208531-208557-initial-1 is invalid.
-recovered pasa_asmbl_47192.p1, initial, 208531, 208557
-recovered pasa_asmbl_47192.p1, terminal, 208531, 208557
-recovered pasa_asmbl_47192.p1, internal, 207794, 207999
-recovered pasa_asmbl_47192.p1, internal, 208531, 208557
-recovered pasa_asmbl_47192.p1, internal, 208753, 209040
-recovered pasa_asmbl_47192.p1, internal, 210704, 210784
-recovered pasa_asmbl_47192.p1, internal, 211696, 211806
-recovered pasa_asmbl_47192.p1, internal, 212037, 212156
-recovered pasa_asmbl_47192.p1, internal, 212439, 212532
-recovered pasa_asmbl_47192.p1, internal, 212960, 213018
Valid prediction for GeneMark_model.26366_t
Valid prediction for GeneMark_model.26360_t
Valid prediction for GlimmerHMM_glimmerT_15649-T1
Valid prediction for GlimmerHMM_glimmerT_15677-T1
Valid prediction for GeneMark_model.26336_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for HiQ_model.g10459.t1
Valid prediction for snap_scaffold_6-snap.2109-T1
Valid prediction for HiQ_model.g10479.t1
Valid prediction for GeneMark_model.26353_t
Valid prediction for snap_scaffold_6-snap.2099-T1
Valid prediction for snap_scaffold_6-snap.2137-T1
Valid prediction for GlimmerHMM_glimmerT_15646-T1
Valid prediction for GeneMark_model.26329_t
Valid prediction for GeneMark_model.26363_t
Valid prediction for snap_scaffold_6-snap.2139-T1
Valid prediction for snap_scaffold_6-snap.2124-T1
Valid prediction for Augustus_model.g10473.t1
Valid prediction for GeneMark_model.26335_t
Couldn't classify 108310, 108416
Sorry, prediction pasa_asmbl_49379.p1 fails validation.
(GAT)	 AG	108310-108416	GT	AGG
(TCA)	 AG	108678-108819	GT	AGG
(GTC)	 AG	109043-109115	GT	AGG
(GCT)	 AG	111713-111804	GT	TGG
(GCA)	 AG	113206-113302	GT	AGG
(ATT)	 AG	113425-113552	GT	CTG
(ACA)	 AG	114120-114212	GT	AGG
(GTT)	 AG	114733-114798	GT	AGG
(ATC)	 AG	114976-115164	GT	AGG
(GAG)	 AG	115286-115402	GT	AGG
(AAT)	 AG	115521-115570	GT	GGG
(GAG)	 AG	115712-115839	GT	AGG
(AGT)	 AG	116151-116208	GT	GAG
(GTC)	 AG	116406-116463	AC	AGA
-recovered pasa_asmbl_49379.p1, terminal, 116406, 116463
-recovered pasa_asmbl_49379.p1, internal, 108310, 108416
-recovered pasa_asmbl_49379.p1, internal, 108678, 108819
-recovered pasa_asmbl_49379.p1, internal, 109043, 109115
-recovered pasa_asmbl_49379.p1, internal, 111713, 111804
-recovered pasa_asmbl_49379.p1, internal, 113206, 113302
-recovered pasa_asmbl_49379.p1, internal, 113425, 113552
-recovered pasa_asmbl_49379.p1, internal, 114120, 114212
-recovered pasa_asmbl_49379.p1, internal, 114733, 114798
-recovered pasa_asmbl_49379.p1, internal, 114976, 115164
-recovered pasa_asmbl_49379.p1, internal, 115286, 115402
-recovered pasa_asmbl_49379.p1, internal, 115521, 115570
-recovered pasa_asmbl_49379.p1, internal, 115712, 115839
-recovered pasa_asmbl_49379.p1, internal, 116151, 116208
Valid prediction for GlimmerHMM_glimmerT_15662-T1
Valid prediction for GeneMark_model.26339_t
Valid prediction for snap_scaffold_6-snap.2104-T1
Valid prediction for snap_scaffold_6-snap.2133-T1
Valid prediction for GeneMark_model.26371_t
Valid prediction for GlimmerHMM_glimmerT_15651-T1
Valid prediction for CodingQuarry_transcript_55039-T1
Valid prediction for GlimmerHMM_glimmerT_15668-T1
Valid prediction for snap_scaffold_6-snap.2145-T1
Valid prediction for GlimmerHMM_glimmerT_15670-T1
Valid prediction for GlimmerHMM_glimmerT_15650-T1
Valid prediction for CodingQuarry_transcript_55028-T1
Valid prediction for Augustus_model.g10476.t1
Valid prediction for GlimmerHMM_glimmerT_15674-T1
Valid prediction for GeneMark_model.26356_t
Valid prediction for pasa_asmbl_48571.p1
Valid prediction for snap_scaffold_6-snap.2112-T1
Valid prediction for GeneMark_model.26337_t
Valid prediction for snap_scaffold_6-snap.2128-T1
Valid prediction for snap_scaffold_6-snap.2127-T1
Valid prediction for Augustus_model.g10481.t1
Valid prediction for GlimmerHMM_glimmerT_15673-T1
Valid prediction for GeneMark_model.26344_t
Valid prediction for snap_scaffold_6-snap.2103-T1
Couldn't classify 204704, 204748
Sorry, prediction pasa_asmbl_48570.p1 fails validation.
(GAC)	 CA	204704-204748	GT	GAG
(AGG)	 AG	205255-205356	GT	CCG
(GGA)	 AG	205444-205515	GT	CGG
(ATT)	 AG	205780-205876	GT	CGG
(GCG)	 AG	206083-206270	GT	GGG
(GGT)	 AG	206425-206530	GT	TGG
(AGG)	 AG	207015-207241	AC	GAA
-recovered pasa_asmbl_48570.p1, terminal, 207015, 207241
-recovered pasa_asmbl_48570.p1, internal, 205255, 205356
-recovered pasa_asmbl_48570.p1, internal, 205444, 205515
-recovered pasa_asmbl_48570.p1, internal, 205780, 205876
-recovered pasa_asmbl_48570.p1, internal, 206083, 206270
-recovered pasa_asmbl_48570.p1, internal, 206425, 206530
Valid prediction for snap_scaffold_6-snap.2126-T1
Valid prediction for GlimmerHMM_glimmerT_15672-T1
Valid prediction for GlimmerHMM_glimmerT_15652-T1
Valid prediction for GeneMark_model.26355_t
Valid prediction for GeneMark_model.26341_t
Valid prediction for snap_scaffold_6-snap.2141-T1
Valid prediction for snap_scaffold_6-snap.2102-T1
Valid prediction for GeneMark_model.26333_t
Valid prediction for snap_scaffold_6-snap.2101-T1
Valid prediction for snap_scaffold_6-snap.2136-T1
Valid prediction for GeneMark_model.26365_t
Couldn't classify 30892, 31070
Sorry, prediction pasa_asmbl_48574.p1 fails validation.
(GCC)	 AC	30892-31070	GT	AAG
(AAT)	 AG	31373-31490	GT	AGG
(TAT)	 AG	32128-32201	GT	ACG
(TCT)	 AG	32297-32354	GT	CGG
(CGG)	 AG	32459-32531	GT	AGG
(ATC)	 AG	32629-32774	AG	GAA
-recovered pasa_asmbl_48574.p1, terminal, 32629, 32774
-recovered pasa_asmbl_48574.p1, internal, 31373, 31490
-recovered pasa_asmbl_48574.p1, internal, 32128, 32201
-recovered pasa_asmbl_48574.p1, internal, 32297, 32354
-recovered pasa_asmbl_48574.p1, internal, 32459, 32531
Valid prediction for GeneMark_model.26358_t
Valid prediction for HiQ_model.g10472.t1
Valid prediction for GlimmerHMM_glimmerT_15666-T1
Couldn't classify 48257, 49756
Sorry, prediction pasa_asmbl_48573.p1 fails validation.
(AGG)	 CA	48257-49756	GA	GAG
Valid prediction for GeneMark_model.26331_t
Valid prediction for Augustus_model.g10462.t1
Valid prediction for GeneMark_model.26369_t
Valid prediction for GeneMark_model.26351_t
Valid prediction for snap_scaffold_6-snap.2110-T1
Valid prediction for GlimmerHMM_glimmerT_15669-T1
Valid prediction for Augustus_model.g10478.t1
Valid prediction for snap_scaffold_6-snap.2143-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 25408, rend_intergenic: 20508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52972, rend_intergenic: 46905  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107640, rend_intergenic: 102980  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110059, rend_intergenic: 108835  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181643, rend_intergenic: 176859  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 204654, rend_intergenic: 201580  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207423, rend_intergenic: 204790  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208983, rend_intergenic: 207663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217697, rend_intergenic: 209233  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 218302
-exon list size: 720


building trellis

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48.2    
48.3    
48.5    
48.6    
48.8    
48.9    
49.0    
49.2    
49.3    
49.4    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.6    
50.7    
50.8    
51.0    
51.1    
51.2    
51.4    
51.5    
51.7    
51.8    
51.9    
52.1    
52.2    
52.4    
52.5    
52.6    
52.8    
52.9    
53.0    
53.2    
53.3    
53.5    
53.6    
53.7    
53.9    
54.0    
54.2    
54.3    
54.4    
54.6    
54.7    
54.8    
55.0    
55.1    
55.3    
55.4    
55.5    
55.7    
55.8    
56.0    
56.1    
56.2    
56.4    
56.5    
56.6    
56.8    
56.9    
57.1    
57.2    
57.3    
57.5    
57.6    
57.8    
57.9    
58.0    
58.2    
58.3    
58.4    
58.6    
58.7    
58.9    
59.0    
59.1    
59.3    
59.4    
59.6    
59.7    
59.8    
60.0    
60.1    
60.2    
60.4    
60.5    
60.7    
60.8    
60.9    
61.1    
61.2    
61.4    
61.5    
61.6    
61.8    
61.9    
62.0    
62.2    
62.3    
62.5    
62.6    
62.7    
62.9    
63.0    
63.2    
63.3    
63.4    
63.6    
63.7    
63.9    
64.0    
64.1    
64.3    
64.4    
64.5    
64.7    
64.8    
65.0    
65.1    
65.2    
65.4    
65.5    
65.7    
65.8    
65.9    
66.1    
66.2    
66.3    
66.5    
66.6    
66.8    
66.9    
67.0    
67.2    
67.3    
67.5    
67.6    
67.7    
67.9    
68.0    
68.1    
68.3    
68.4    
68.6    
68.7    
68.8    
69.0    
69.1    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.1    
70.2    
70.4    
70.5    
70.6    
70.8    
70.9    
71.1    
71.2    
71.3    
71.5    
71.6    
71.7    
71.9    
72.0    
72.2    
72.3    
72.4    
72.6    
72.7    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.7    
73.8    
74.0    
74.1    
74.2    
74.4    
74.5    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.5    
75.6    
75.8    
75.9    
76.0    
76.2    
76.3    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.3    
77.4    
77.6    
77.7    
77.8    
78.0    
78.1    
78.3    
78.4    
78.5    
78.7    
78.8    
78.9    
79.1    
79.2    
79.4    
79.5    
79.6    
79.8    
79.9    
80.1    
80.2    
80.3    
80.5    
80.6    
80.7    
80.9    
81.0    
81.2    
81.3    
81.4    
81.6    
81.7    
81.9    
82.0    
82.1    
82.3    
82.4    
82.5    
82.7    
82.8    
83.0    
83.1    
83.2    
83.4    
83.5    
83.7    
83.8    
83.9    
84.1    
84.2    
84.3    
84.5    
84.6    
84.8    
84.9    
85.0    
85.2    
85.3    
85.5    
85.6    
85.7    
85.9    
86.0    
86.1    
86.3    
86.4    
86.6    
86.7    
86.8    
87.0    
87.1    
87.3    
87.4    
87.5    
87.7    
87.8    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.8    
88.9    
89.1    
89.2    
89.3    
89.5    
89.6    
89.8    
89.9    
90.0    
90.2    
90.3    
90.4    
90.6    
90.7    
90.9    
91.0    
91.1    
91.3    
91.4    
91.6    
91.7    
91.8    
92.0    
92.1    
92.2    
92.4    
92.5    
92.7    
92.8    
92.9    
93.1    
93.2    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.2    
94.3    
94.5    
94.6    
94.7    
94.9    
95.0    
95.2    
95.3    
95.4    
95.6    
95.7    
95.8    
96.0    
96.1    
96.3    
96.4    
96.5    
96.7    
96.8    
97.0    
97.1    
97.2    
97.4    
97.5    
97.6    
97.8    
97.9    
98.1    
98.2    
98.3    
98.5    
98.6    
98.8    
98.9    
99.0    
99.2    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 36 predictions from path traversal
Error with prediction: snap lend_intergenic: 25408, rend_intergenic: 20508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52972, rend_intergenic: 46905  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107640, rend_intergenic: 102980  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110059, rend_intergenic: 108835  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181643, rend_intergenic: 176859  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 204654, rend_intergenic: 201580  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207423, rend_intergenic: 204790  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208983, rend_intergenic: 207663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217697, rend_intergenic: 209233  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 30 predictions persist after filtering for low support