-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_6/scaffold_6_7214065-7505139

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.25830_t
Valid prediction for GeneMark_model.25834_t
Valid prediction for GlimmerHMM_glimmerT_15297-T1
Valid prediction for snap_scaffold_6-snap.1646-T1
Valid prediction for Augustus_model.g10182.t1
Valid prediction for GlimmerHMM_glimmerT_15275-T1
Valid prediction for snap_scaffold_6-snap.1658-T1
Valid prediction for GlimmerHMM_glimmerT_15264-T1
Valid prediction for GeneMark_model.25784_t
Couldn't classify 132142, 132225
Sorry, prediction pasa_asmbl_47005.p1 fails validation.
(GTC)	 CA	132142-132225	GT	AGG
(CGG)	 AG	134495-134559	GT	AGG
(GAA)	 AG	135560-135626	GT	AGG
(GGG)	 AG	135708-135826	GT	AGG
(AGA)	 AG	136656-136736	GT	AGG
(ACA)	 AG	137110-137222	GT	AGG
(ACA)	 AG	138036-138184	GT	GGG
(AAC)	 AG	138608-138769	GA	AGG
-recovered pasa_asmbl_47005.p1, terminal, 138608, 138769
-recovered pasa_asmbl_47005.p1, internal, 134495, 134559
-recovered pasa_asmbl_47005.p1, internal, 135560, 135626
-recovered pasa_asmbl_47005.p1, internal, 135708, 135826
-recovered pasa_asmbl_47005.p1, internal, 136656, 136736
-recovered pasa_asmbl_47005.p1, internal, 137110, 137222
-recovered pasa_asmbl_47005.p1, internal, 138036, 138184
Valid prediction for GeneMark_model.25777_t
Valid prediction for GeneMark_model.25814_t
Valid prediction for snap_scaffold_6-snap.1666-T1
Valid prediction for GeneMark_model.25827_t
Valid prediction for snap_scaffold_6-snap.1636-T1
Valid prediction for GeneMark_model.25823_t
Valid prediction for GeneMark_model.25801_t
Valid prediction for Augustus_model.g10164.t1
Valid prediction for GeneMark_model.25826_t
Valid prediction for snap_scaffold_6-snap.1660-T1
Valid prediction for snap_scaffold_6-snap.1650-T1
Valid prediction for GeneMark_model.25800_t
Valid prediction for GlimmerHMM_glimmerT_15295-T1
Valid prediction for GeneMark_model.25775_t
Valid prediction for GlimmerHMM_glimmerT_15291-T1
Valid prediction for snap_scaffold_6-snap.1638-T1
Valid prediction for GeneMark_model.25773_t
Valid prediction for CodingQuarry_transcript_54953-T1
Valid prediction for HiQ_model.g10173.t1
Valid prediction for GeneMark_model.25788_t
Couldn't classify 76088, 76212
Sorry, prediction pasa_asmbl_46997.p1 fails validation.
(ATG)	 CC	75343-75973	GT	AGG
(GGT)	 AG	76088-76212	CC	GGC
-recovered pasa_asmbl_46997.p1, initial, 75343, 75973
Valid prediction for GeneMark_model.25828_t
Valid prediction for pasa_asmbl_47001.p1
Valid prediction for CodingQuarry_transcript_54951-T1
Valid prediction for snap_scaffold_6-snap.1626-T1
Valid prediction for GeneMark_model.25835_t
Valid prediction for Augustus_model.g10176.t1
Valid prediction for Augustus_model.g10186.t1
Valid prediction for snap_scaffold_6-snap.1665-T1
Valid prediction for GeneMark_model.25803_t
Valid prediction for GeneMark_model.25796_t
Valid prediction for snap_scaffold_6-snap.1649-T1
Valid prediction for snap_scaffold_6-snap.1670-T1
Valid prediction for GeneMark_model.25772_t
Valid prediction for GlimmerHMM_glimmerT_15282-T1
Valid prediction for snap_scaffold_6-snap.1642-T1
Valid prediction for snap_scaffold_6-snap.1648-T1
Valid prediction for GlimmerHMM_glimmerT_15292-T1
Valid prediction for GeneMark_model.25792_t
Valid prediction for snap_scaffold_6-snap.1661-T1
Valid prediction for snap_scaffold_6-snap.1639-T1
Valid prediction for GlimmerHMM_glimmerT_15262-T1
Valid prediction for snap_scaffold_6-snap.1662-T1
Valid prediction for GeneMark_model.25771_t
Valid prediction for GeneMark_model.25786_t
Valid prediction for GeneMark_model.25797_t
Valid prediction for GeneMark_model.25805_t
Couldn't classify 76273, 76291
Sorry, prediction pasa_asmbl_46999.p3 fails validation.
(GCC)	 CC	76273-76291	GT	AGG
(GCT)	 AG	76489-76859	GT	AGG
-recovered pasa_asmbl_46999.p3, terminal, 76489, 76859
-recovered pasa_asmbl_46999.p3, internal, 76489, 76859
Valid prediction for snap_scaffold_6-snap.1623-T1
Valid prediction for snap_scaffold_6-snap.1628-T1
Valid prediction for GeneMark_model.25791_t
Valid prediction for GeneMark_model.25804_t
Couldn't classify 103759, 104261
Sorry, prediction pasa_asmbl_47003.p1 fails validation.
(TCC)	 CC	103759-104261	GT	AGG
(CAT)	 AG	104397-104662	GT	AGG
(CTG)	 AG	104918-105103	GT	AGG
(TCC)	 AG	105258-105373	GT	AGG
(GTG)	 AG	105555-105686	CG	GAC
-recovered pasa_asmbl_47003.p1, terminal, 105555, 105686
-recovered pasa_asmbl_47003.p1, internal, 104397, 104662
-recovered pasa_asmbl_47003.p1, internal, 104918, 105103
-recovered pasa_asmbl_47003.p1, internal, 105258, 105373
Valid prediction for Augustus_model.g10181.t1
Valid prediction for GeneMark_model.25807_t
Valid prediction for snap_scaffold_6-snap.1663-T1
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for Augustus_model.g10178.t1
Valid prediction for GeneMark_model.25816_t
Valid prediction for GeneMark_model.25779_t
Valid prediction for snap_scaffold_6-snap.1624-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_15270-T1
Valid prediction for GeneMark_model.25812_t
Valid prediction for GeneMark_model.25824_t
Valid prediction for GlimmerHMM_glimmerT_15281-T1
Valid prediction for Augustus_model.g10175.t1
Valid prediction for GeneMark_model.25793_t
Valid prediction for snap_scaffold_6-snap.1644-T1
Valid prediction for GlimmerHMM_glimmerT_15273-T1
Valid prediction for HiQ_model.g10171.t1
Valid prediction for GeneMark_model.25821_t
Valid prediction for GlimmerHMM_glimmerT_15271-T1
Valid prediction for GeneMark_model.25795_t
Valid prediction for Augustus_model.g10172.t1
Valid prediction for GlimmerHMM_glimmerT_15287-T1
Valid prediction for Augustus_model.g10185.t1
Valid prediction for GeneMark_model.25789_t
Valid prediction for GlimmerHMM_glimmerT_15286-T1
Valid prediction for snap_scaffold_6-snap.1637-T1
Valid prediction for snap_scaffold_6-snap.1640-T1
Sorry, intron length (4) is less than minimum required (10)
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for Augustus_model.g10174.t1
Valid prediction for GeneMark_model.25780_t
Valid prediction for GlimmerHMM_glimmerT_15279-T1
Valid prediction for GlimmerHMM_glimmerT_15272-T1
Valid prediction for GeneMark_model.25836_t
Valid prediction for snap_scaffold_6-snap.1651-T1
Valid prediction for GeneMark_model.25832_t
Valid prediction for snap_scaffold_6-snap.1668-T1
Valid prediction for Augustus_model.g10177.t1
Valid prediction for GlimmerHMM_glimmerT_15274-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_6-snap.1630-T1
Valid prediction for GeneMark_model.25831_t
Couldn't classify 67088, 67220
Couldn't classify 68622, 68695
Sorry, prediction pasa_asmbl_48431.p1 fails validation.
(AAG)	 GG	67088-67220	GT	GGG
(AAG)	 AG	68351-68521	GT	CGG
(GTT)	 AG	68622-68695	AC	GTA
-recovered pasa_asmbl_48431.p1, internal, 68351, 68521
Valid prediction for GlimmerHMM_glimmerT_15283-T1
Valid prediction for GlimmerHMM_glimmerT_15285-T1
Valid prediction for GeneMark_model.25778_t
Valid prediction for GeneMark_model.25799_t
Valid prediction for GeneMark_model.25785_t
Valid prediction for CodingQuarry_transcript_54948-T1
Valid prediction for GeneMark_model.25808_t
Valid prediction for snap_scaffold_6-snap.1634-T1
Valid prediction for snap_scaffold_6-snap.1631-T1
Valid prediction for pasa_asmbl_48426.p1
Valid prediction for GlimmerHMM_glimmerT_15293-T1
Valid prediction for HiQ_model.g10167.t1
Couldn't classify 74520, 75440
Sorry, prediction pasa_asmbl_48429.p1 fails validation.
(TCC)	 AC	74520-75440	GA	ACG
Valid prediction for GeneMark_model.25790_t
Valid prediction for GeneMark_model.25810_t
Valid prediction for snap_scaffold_6-snap.1657-T1
Valid prediction for GeneMark_model.25809_t
Valid prediction for Augustus_model.g10184.t1
Valid prediction for GlimmerHMM_glimmerT_15288-T1
Valid prediction for snap_scaffold_6-snap.1647-T1
Valid prediction for snap_scaffold_6-snap.1669-T1
Valid prediction for GlimmerHMM_glimmerT_15276-T1
Valid prediction for GeneMark_model.25794_t
Valid prediction for snap_scaffold_6-snap.1664-T1
Valid prediction for snap_scaffold_6-snap.1654-T1
Valid prediction for GlimmerHMM_glimmerT_15296-T1
Valid prediction for GeneMark_model.25819_t
Valid prediction for Augustus_model.g10165.t1
Valid prediction for Augustus_model.g10187.t1
Valid prediction for GlimmerHMM_glimmerT_15267-T1
Couldn't classify 237693, 237797
Sorry, prediction pasa_asmbl_48423.p1 fails validation.
(ATG)	 AC	234265-234279	GT	AGG
(AGG)	 AG	235499-235646	GT	AGG
(ATT)	 AG	236346-236528	GT	GGG
(ACC)	 AG	236657-236896	GT	GGG
(GCC)	 AG	236992-237074	GT	AGG
(GTG)	 AG	237172-237276	GT	ATG
(ACT)	 AG	237455-237553	GT	TGG
(GAC)	 AG	237693-237797	GA	AGG
-recovered pasa_asmbl_48423.p1, initial, 234265, 234279
-recovered pasa_asmbl_48423.p1, internal, 235499, 235646
-recovered pasa_asmbl_48423.p1, internal, 236346, 236528
-recovered pasa_asmbl_48423.p1, internal, 236657, 236896
-recovered pasa_asmbl_48423.p1, internal, 236992, 237074
-recovered pasa_asmbl_48423.p1, internal, 237172, 237276
-recovered pasa_asmbl_48423.p1, internal, 237455, 237553
Valid prediction for snap_scaffold_6-snap.1629-T1
Valid prediction for GeneMark_model.25815_t
Valid prediction for snap_scaffold_6-snap.1632-T1
Valid prediction for snap_scaffold_6-snap.1627-T1
Valid prediction for snap_scaffold_6-snap.1656-T1
Valid prediction for Augustus_model.g10183.t1
Valid prediction for Augustus_model.g10163.t1
Valid prediction for CodingQuarry_transcript_54949-T1
Valid prediction for GlimmerHMM_glimmerT_15284-T1
Valid prediction for snap_scaffold_6-snap.1655-T1
Couldn't classify 223492, 225091
Sorry, prediction pasa_asmbl_48425.p1 fails validation.
(CGT)	 AT	223492-225091	GT	AGG
(GTG)	 AG	225376-225661	GT	AGG
(GTA)	 AG	225949-226081	GT	AGG
(GAC)	 AG	226190-226474	CA	GAC
add_exon() Sorry, pasa_asmbl_48425.p1 225376-225661-terminal-3 is invalid.
-recovered pasa_asmbl_48425.p1, terminal, 225376, 225661
-recovered pasa_asmbl_48425.p1, terminal, 226190, 226474
-recovered pasa_asmbl_48425.p1, internal, 225376, 225661
-recovered pasa_asmbl_48425.p1, internal, 225949, 226081
Valid prediction for GeneMark_model.25781_t
Valid prediction for snap_scaffold_6-snap.1645-T1
Valid prediction for Augustus_model.g10168.t1
Valid prediction for GlimmerHMM_glimmerT_15294-T1
Valid prediction for GlimmerHMM_glimmerT_15280-T1
Valid prediction for snap_scaffold_6-snap.1635-T1
Valid prediction for GlimmerHMM_glimmerT_15269-T1
Valid prediction for Augustus_model.g10166.t1
Valid prediction for snap_scaffold_6-snap.1652-T1
Valid prediction for GlimmerHMM_glimmerT_15289-T1
Valid prediction for GlimmerHMM_glimmerT_15278-T1
Couldn't classify 69383, 69475
Couldn't classify 74257, 74294
Sorry, prediction pasa_asmbl_48430.p1 fails validation.
(AGT)	 GA	69383-69475	GT	AGG
(CCT)	 AG	69951-70083	GT	AGG
(CTC)	 AG	70358-70472	GT	ATG
(CTA)	 AG	71037-71112	GT	CGG
(GTT)	 AG	73547-73772	GT	GTG
(GTG)	 AG	73939-74085	GT	GGG
(GGA)	 AG	74257-74294	AA	ACA
-recovered pasa_asmbl_48430.p1, internal, 69951, 70083
-recovered pasa_asmbl_48430.p1, internal, 70358, 70472
-recovered pasa_asmbl_48430.p1, internal, 71037, 71112
-recovered pasa_asmbl_48430.p1, internal, 73547, 73772
-recovered pasa_asmbl_48430.p1, internal, 73939, 74085
Valid prediction for GlimmerHMM_glimmerT_15266-T1
Valid prediction for GeneMark_model.25787_t
Valid prediction for GlimmerHMM_glimmerT_15298-T1
Valid prediction for Augustus_model.g10179.t1
Valid prediction for snap_scaffold_6-snap.1641-T1
Valid prediction for GlimmerHMM_glimmerT_15277-T1
Valid prediction for GeneMark_model.25802_t
Valid prediction for snap_scaffold_6-snap.1659-T1
Valid prediction for snap_scaffold_6-snap.1633-T1
Valid prediction for GeneMark_model.25825_t
Valid prediction for GeneMark_model.25774_t
Valid prediction for GeneMark_model.25829_t
Valid prediction for snap_scaffold_6-snap.1625-T1
Valid prediction for GlimmerHMM_glimmerT_15268-T1
Valid prediction for GlimmerHMM_glimmerT_15263-T1
Valid prediction for GeneMark_model.25776_t
Valid prediction for snap_scaffold_6-snap.1643-T1
Valid prediction for GeneMark_model.25811_t
Valid prediction for GeneMark_model.25783_t
Valid prediction for GeneMark_model.25817_t
Valid prediction for GeneMark_model.25833_t
Valid prediction for GeneMark_model.25813_t
Valid prediction for snap_scaffold_6-snap.1653-T1
Valid prediction for Augustus_model.g10180.t1
Valid prediction for GeneMark_model.25820_t
Valid prediction for snap_scaffold_6-snap.1671-T1
Valid prediction for GeneMark_model.25798_t
Valid prediction for GeneMark_model.25782_t
Valid prediction for snap_scaffold_6-snap.1667-T1
Valid prediction for GlimmerHMM_glimmerT_15290-T1
Valid prediction for Augustus_model.g10188.t1
Valid prediction for Augustus_model.g10169.t1
Valid prediction for GeneMark_model.25818_t
Valid prediction for GlimmerHMM_glimmerT_15265-T1
Valid prediction for CodingQuarry_transcript_54950-T1
Valid prediction for GeneMark_model.25822_t
Couldn't classify 238477, 238596
Sorry, prediction pasa_asmbl_48422.p1 fails validation.
(GAG)	 AC	238477-238596	GT	TGG
(GCC)	 AG	238729-238818	GT	AGG
(ATC)	 AG	239092-239232	GC	AGG
(GAG)	 AG	239337-239430	GT	CAG
(GCT)	 AG	239652-239798	GT	AGG
(AGA)	 AG	241523-241629	GT	AGG
(GAC)	 AG	241740-241838	AA	AGA
-recovered pasa_asmbl_48422.p1, terminal, 241740, 241838
-recovered pasa_asmbl_48422.p1, internal, 238729, 238818
-recovered pasa_asmbl_48422.p1, internal, 239092, 239232
-recovered pasa_asmbl_48422.p1, internal, 239337, 239430
-recovered pasa_asmbl_48422.p1, internal, 239652, 239798
-recovered pasa_asmbl_48422.p1, internal, 241523, 241629
Valid prediction for HiQ_model.g10170.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 27059, rend_intergenic: 20350  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41594, rend_intergenic: 40010  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 113846, rend_intergenic: 111534  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114977, rend_intergenic: 114608  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135160, rend_intergenic: 122667  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140043, rend_intergenic: 136603  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 222470, rend_intergenic: 214771  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 237996, rend_intergenic: 224875  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 240837, rend_intergenic: 238294  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 245560, rend_intergenic: 241047  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 258060, rend_intergenic: 246191  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 260254, rend_intergenic: 259309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 264170, rend_intergenic: 260599  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 274820, rend_intergenic: 264175  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 291075
-exon list size: 900


building trellis

0.1    
0.2    
0.3    
0.4    
0.6    
0.7    
0.8    
0.9    
1.0    
1.1    
1.2    
1.3    
1.4    
1.6    
1.7    
1.8    
1.9    
2.0    
2.1    
2.2    
2.3    
2.4    
2.5    
2.7    
2.8    
2.9    
3.0    
3.1    
3.2    
3.3    
3.4    
3.5    
3.7    
3.8    
3.9    
4.0    
4.1    
4.2    
4.3    
4.4    
4.5    
4.7    
4.8    
4.9    
5.0    
5.1    
5.2    
5.3    
5.4    
5.5    
5.7    
5.8    
5.9    
6.0    
6.1    
6.2    
6.3    
6.4    
6.5    
6.7    
6.8    
6.9    
7.0    
7.1    
7.2    
7.3    
7.4    
7.5    
7.6    
7.8    
7.9    
8.0    
8.1    
8.2    
8.3    
8.4    
8.5    
8.6    
8.8    
8.9    
9.0    
9.1    
9.2    
9.3    
9.4    
9.5    
9.6    
9.8    
9.9    
10.0    
10.1    
10.2    
10.3    
10.4    
10.5    
10.6    
10.8    
10.9    
11.0    
11.1    
11.2    
11.3    
11.4    
11.5    
11.6    
11.8    
11.9    
12.0    
12.1    
12.2    
12.3    
12.4    
12.5    
12.6    
12.7    
12.9    
13.0    
13.1    
13.2    
13.3    
13.4    
13.5    
13.6    
13.7    
13.9    
14.0    
14.1    
14.2    
14.3    
14.4    
14.5    
14.6    
14.7    
14.9    
15.0    
15.1    
15.2    
15.3    
15.4    
15.5    
15.6    
15.7    
15.9    
16.0    
16.1    
16.2    
16.3    
16.4    
16.5    
16.6    
16.7    
16.9    
17.0    
17.1    
17.2    
17.3    
17.4    
17.5    
17.6    
17.7    
17.8    
18.0    
18.1    
18.2    
18.3    
18.4    
18.5    
18.6    
18.7    
18.8    
19.0    
19.1    
19.2    
19.3    
19.4    
19.5    
19.6    
19.7    
19.8    
20.0    
20.1    
20.2    
20.3    
20.4    
20.5    
20.6    
20.7    
20.8    
21.0    
21.1    
21.2    
21.3    
21.4    
21.5    
21.6    
21.7    
21.8    
22.0    
22.1    
22.2    
22.3    
22.4    
22.5    
22.6    
22.7    
22.8    
22.9    
23.1    
23.2    
23.3    
23.4    
23.5    
23.6    
23.7    
23.8    
23.9    
24.1    
24.2    
24.3    
24.4    
24.5    
24.6    
24.7    
24.8    
24.9    
25.1    
25.2    
25.3    
25.4    
25.5    
25.6    
25.7    
25.8    
25.9    
26.1    
26.2    
26.3    
26.4    
26.5    
26.6    
26.7    
26.8    
26.9    
27.1    
27.2    
27.3    
27.4    
27.5    
27.6    
27.7    
27.8    
27.9    
28.0    
28.2    
28.3    
28.4    
28.5    
28.6    
28.7    
28.8    
28.9    
29.0    
29.2    
29.3    
29.4    
29.5    
29.6    
29.7    
29.8    
29.9    
30.0    
30.2    
30.3    
30.4    
30.5    
30.6    
30.7    
30.8    
30.9    
31.0    
31.2    
31.3    
31.4    
31.5    
31.6    
31.7    
31.8    
31.9    
32.0    
32.2    
32.3    
32.4    
32.5    
32.6    
32.7    
32.8    
32.9    
33.0    
33.1    
33.3    
33.4    
33.5    
33.6    
33.7    
33.8    
33.9    
34.0    
34.1    
34.3    
34.4    
34.5    
34.6    
34.7    
34.8    
34.9    
35.0    
35.1    
35.3    
35.4    
35.5    
35.6    
35.7    
35.8    
35.9    
36.0    
36.1    
36.3    
36.4    
36.5    
36.6    
36.7    
36.8    
36.9    
37.0    
37.1    
37.3    
37.4    
37.5    
37.6    
37.7    
37.8    
37.9    
38.0    
38.1    
38.2    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.1    
39.2    
39.4    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.2    
40.4    
40.5    
40.6    
40.7    
40.8    
40.9    
41.0    
41.1    
41.2    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.1    
42.2    
42.4    
42.5    
42.6    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.3    
49.4    
49.6    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.4    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.6    
99.7    
99.8    
99.9    
-found 46 predictions from path traversal
Error with prediction: snap lend_intergenic: 27059, rend_intergenic: 20350  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41594, rend_intergenic: 40010  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 113846, rend_intergenic: 111534  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114977, rend_intergenic: 114608  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135160, rend_intergenic: 122667  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140043, rend_intergenic: 136603  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 222470, rend_intergenic: 214771  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 237996, rend_intergenic: 224875  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 240837, rend_intergenic: 238294  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 245560, rend_intergenic: 241047  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 258060, rend_intergenic: 246191  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 260254, rend_intergenic: 259309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 264170, rend_intergenic: 260599  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 274820, rend_intergenic: 264175  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 27 predictions persist after filtering for low support