-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_6/scaffold_6_5655253-5922025

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 4102, 4213
Couldn't classify 7977, 8127
Sorry, prediction pasa_asmbl_46910.p1 fails validation.
(GTC)	 CT	4102-4213	GT	TGG
(TCC)	 AG	4312-4443	GT	AGG
(TGT)	 AG	5035-5203	GT	ATG
(TCG)	 AG	5458-5581	GT	AGG
(GCG)	 AG	5705-5820	GT	AGG
(GCT)	 AG	5922-6009	GT	AGG
(AAA)	 AG	6106-6350	GT	GGG
(GGT)	 AG	7429-7558	GT	AGG
(ATG)	 AG	7690-7823	GT	AGG
(ACA)	 AG	7977-8127	GC	GGG
-recovered pasa_asmbl_46910.p1, initial, 7690, 7823
-recovered pasa_asmbl_46910.p1, internal, 4312, 4443
-recovered pasa_asmbl_46910.p1, internal, 5035, 5203
-recovered pasa_asmbl_46910.p1, internal, 5458, 5581
-recovered pasa_asmbl_46910.p1, internal, 5705, 5820
-recovered pasa_asmbl_46910.p1, internal, 5922, 6009
-recovered pasa_asmbl_46910.p1, internal, 6106, 6350
-recovered pasa_asmbl_46910.p1, internal, 7429, 7558
-recovered pasa_asmbl_46910.p1, internal, 7690, 7823
-recovered pasa_asmbl_46910.p1, internal, 7977, 8127
Valid prediction for Augustus_model.g10030.t1
Valid prediction for GlimmerHMM_glimmerT_15056-T1
Couldn't classify 8456, 8538
Sorry, prediction pasa_asmbl_46911.p1 fails validation.
(TTT)	 AG	8456-8538	GT	CAG
(GGG)	 AG	8674-8783	GT	GGG
(ATG)	 AG	9000-9113	GT	AGG
(ACA)	 AG	9196-9266	GT	CTG
(AAT)	 AG	9374-9465	GT	CGG
(CAT)	 AG	9810-9919	GT	AGG
(AGC)	 AG	10072-10187	AA	AAA
add_exon() Sorry, pasa_asmbl_46911.p1 9000-9113-initial-1 is invalid.
-recovered pasa_asmbl_46911.p1, initial, 9000, 9113
-recovered pasa_asmbl_46911.p1, terminal, 10072, 10187
-recovered pasa_asmbl_46911.p1, internal, 8456, 8538
-recovered pasa_asmbl_46911.p1, internal, 8674, 8783
-recovered pasa_asmbl_46911.p1, internal, 9000, 9113
-recovered pasa_asmbl_46911.p1, internal, 9196, 9266
-recovered pasa_asmbl_46911.p1, internal, 9374, 9465
-recovered pasa_asmbl_46911.p1, internal, 9810, 9919
Valid prediction for GlimmerHMM_glimmerT_15066-T1
Valid prediction for GlimmerHMM_glimmerT_15051-T1
Valid prediction for GeneMark_model.25453_t
Valid prediction for GeneMark_model.25468_t
Valid prediction for snap_scaffold_6-snap.1316-T1
Valid prediction for GeneMark_model.25444_t
Valid prediction for GeneMark_model.25460_t
Valid prediction for GlimmerHMM_glimmerT_15052-T1
Valid prediction for Augustus_model.g10033.t1
Valid prediction for snap_scaffold_6-snap.1304-T1
Valid prediction for pasa_asmbl_46916.p1
Valid prediction for snap_scaffold_6-snap.1309-T1
Valid prediction for GlimmerHMM_glimmerT_15038-T1
Valid prediction for snap_scaffold_6-snap.1322-T1
Couldn't classify 255739, 255852
Couldn't classify 256326, 256382
Sorry, prediction pasa_asmbl_47908.p1 fails validation.
(AAG)	 GC	255739-255852	GT	AGG
(GTG)	 AG	255983-256219	GT	AGG
(GTG)	 AG	256326-256382	CA	GTC
-recovered pasa_asmbl_47908.p1, internal, 255983, 256219
Valid prediction for GlimmerHMM_glimmerT_15060-T1
Valid prediction for CodingQuarry_transcript_54913-T1
Valid prediction for GeneMark_model.25477_t
Valid prediction for snap_scaffold_6-snap.1314-T1
Valid prediction for GlimmerHMM_glimmerT_15041-T1
Valid prediction for GeneMark_model.25450_t
Valid prediction for Augustus_model.g10027.t1
Valid prediction for GlimmerHMM_glimmerT_15054-T1
Valid prediction for GlimmerHMM_glimmerT_15042-T1
Couldn't classify 158112, 158168
Sorry, prediction pasa_asmbl_47858.p1 fails validation.
(ATG)	 CA	157374-157441	GT	CAG
(GTC)	 AG	157707-157746	GT	AGG
(GTG)	 AG	157831-158028	GT	TTG
(GGT)	 AG	158112-158168	AA	GAA
-recovered pasa_asmbl_47858.p1, initial, 157374, 157441
-recovered pasa_asmbl_47858.p1, internal, 157707, 157746
-recovered pasa_asmbl_47858.p1, internal, 157831, 158028
Valid prediction for GlimmerHMM_glimmerT_15044-T1
Valid prediction for Augustus_model.g10024.t1
Valid prediction for GeneMark_model.25472_t
Valid prediction for GeneMark_model.25456_t
Valid prediction for snap_scaffold_6-snap.1310-T1
Valid prediction for snap_scaffold_6-snap.1330-T1
Valid prediction for GlimmerHMM_glimmerT_15049-T1
Valid prediction for Augustus_model.g10017.t1
Valid prediction for snap_scaffold_6-snap.1321-T1
Valid prediction for GlimmerHMM_glimmerT_15048-T1
Valid prediction for GeneMark_model.25479_t
Valid prediction for snap_scaffold_6-snap.1333-T1
Couldn't classify 254307, 254375
Couldn't classify 254705, 254881
Sorry, prediction pasa_asmbl_47929.p1 fails validation.
(CTG)	 TC	254307-254375	GT	AGG
(GAC)	 AG	254478-254558	GT	AGG
(GGT)	 AG	254705-254881	CT	TGC
-recovered pasa_asmbl_47929.p1, internal, 254478, 254558
Valid prediction for snap_scaffold_6-snap.1306-T1
Valid prediction for HiQ_model.g10019.t1
Valid prediction for GeneMark_model.25449_t
Valid prediction for GlimmerHMM_glimmerT_15061-T1
Valid prediction for CodingQuarry_transcript_54915-T1
Couldn't classify 256642, 256735
Couldn't classify 257395, 257484
Sorry, prediction pasa_asmbl_47882.p2 fails validation.
(ATT)	 AG	256642-256735	GT	CGG
(CTC)	 AG	256911-257044	GT	AGG
(ATT)	 AG	257395-257484	CA	GAC
-recovered pasa_asmbl_47882.p2, internal, 256642, 256735
-recovered pasa_asmbl_47882.p2, internal, 256911, 257044
Valid prediction for HiQ_model.g10018.t1
Valid prediction for GeneMark_model.25465_t
Valid prediction for snap_scaffold_6-snap.1317-T1
Valid prediction for GeneMark_model.25473_t
Valid prediction for GlimmerHMM_glimmerT_15067-T1
Valid prediction for Augustus_model.g10016.t1
Valid prediction for CodingQuarry_transcript_54914-T1
Valid prediction for Augustus_model.g10031.t1
Valid prediction for GlimmerHMM_glimmerT_15059-T1
Valid prediction for GeneMark_model.25481_t
Valid prediction for CodingQuarry_transcript_54916-T1
Valid prediction for Augustus_model.g10028.t1
Valid prediction for snap_scaffold_6-snap.1308-T1
Couldn't classify 158916, 159248
Sorry, prediction pasa_asmbl_46919.p1 fails validation.
(CCA)	 TA	158916-159248	GT	TCG
(GGA)	 AG	159372-159615	GT	AGG
(GAT)	 AG	159731-159759	GT	AGG
(GTG)	 AG	159843-159981	GT	CGG
(GGC)	 AG	160081-160239	GT	GGG
(ATG)	 AG	160374-160579	GT	GCG
(GTG)	 AG	160800-160900	GT	AAG
(GTG)	 AG	161011-161192	GT	TGG
(GCA)	 AG	161343-161416	GT	AGG
(CAG)	 AG	161558-161694	GT	ATG
(GTG)	 AG	161777-161882	GT	ATG
(ATT)	 AG	162007-162115	GT	CAG
(TTA)	 AG	162247-162377	GT	GGG
(GCT)	 AG	163077-163240	GT	AGG
(GTT)	 AG	163321-163510	TT	AAT
add_exon() Sorry, pasa_asmbl_46919.p1 160374-160579-initial-1 is invalid.
-recovered pasa_asmbl_46919.p1, initial, 160374, 160579
-recovered pasa_asmbl_46919.p1, terminal, 163321, 163510
-recovered pasa_asmbl_46919.p1, internal, 159372, 159615
-recovered pasa_asmbl_46919.p1, internal, 159731, 159759
-recovered pasa_asmbl_46919.p1, internal, 159843, 159981
-recovered pasa_asmbl_46919.p1, internal, 160081, 160239
-recovered pasa_asmbl_46919.p1, internal, 160374, 160579
-recovered pasa_asmbl_46919.p1, internal, 160800, 160900
-recovered pasa_asmbl_46919.p1, internal, 161011, 161192
-recovered pasa_asmbl_46919.p1, internal, 161343, 161416
-recovered pasa_asmbl_46919.p1, internal, 161558, 161694
-recovered pasa_asmbl_46919.p1, internal, 161777, 161882
-recovered pasa_asmbl_46919.p1, internal, 162007, 162115
-recovered pasa_asmbl_46919.p1, internal, 162247, 162377
-recovered pasa_asmbl_46919.p1, internal, 163077, 163240
Valid prediction for GeneMark_model.25447_t
Valid prediction for GeneMark_model.25443_t
Valid prediction for GeneMark_model.25442_t
Valid prediction for GlimmerHMM_glimmerT_15043-T1
Valid prediction for snap_scaffold_6-snap.1315-T1
Valid prediction for Augustus_model.g10014.t1
Valid prediction for GlimmerHMM_glimmerT_15065-T1
Valid prediction for snap_scaffold_6-snap.1331-T1
Valid prediction for GlimmerHMM_glimmerT_15064-T1
Valid prediction for GlimmerHMM_glimmerT_15047-T1
Valid prediction for Augustus_model.g10015.t1
Valid prediction for snap_scaffold_6-snap.1305-T1
Valid prediction for GlimmerHMM_glimmerT_15045-T1
Couldn't classify 1822, 1908
Couldn't classify 3286, 3398
Sorry, prediction pasa_asmbl_46909.p1 fails validation.
(GAC)	 CA	1822-1908	GT	TGG
(GAT)	 AG	2076-2243	GT	GGG
(TCC)	 AG	2328-2439	GT	AGG
(GGG)	 AG	2584-2742	GT	AGG
(CGT)	 AG	2847-2993	GT	GAG
(CGT)	 AG	3082-3180	GT	AGG
(ACA)	 AG	3286-3398	AT	GCA
-recovered pasa_asmbl_46909.p1, internal, 2076, 2243
-recovered pasa_asmbl_46909.p1, internal, 2328, 2439
-recovered pasa_asmbl_46909.p1, internal, 2584, 2742
-recovered pasa_asmbl_46909.p1, internal, 2847, 2993
-recovered pasa_asmbl_46909.p1, internal, 3082, 3180
Valid prediction for GlimmerHMM_glimmerT_15039-T1
Valid prediction for GeneMark_model.25454_t
Valid prediction for GlimmerHMM_glimmerT_15069-T1
Valid prediction for snap_scaffold_6-snap.1307-T1
Valid prediction for snap_scaffold_6-snap.1319-T1
Valid prediction for Augustus_model.g10022.t1
Couldn't classify 26290, 26362
Sorry, prediction pasa_asmbl_46913.p1 fails validation.
(GTA)	 GA	26290-26362	GT	AGG
(ATC)	 AG	26708-26822	GT	AGG
(GGA)	 AG	26999-27045	GT	AGG
(GAG)	 AG	27131-27213	TC	GAT
add_exon() Sorry, pasa_asmbl_46913.p1 26999-27045-terminal-2 is invalid.
-recovered pasa_asmbl_46913.p1, terminal, 26999, 27045
-recovered pasa_asmbl_46913.p1, terminal, 27131, 27213
-recovered pasa_asmbl_46913.p1, internal, 26708, 26822
-recovered pasa_asmbl_46913.p1, internal, 26999, 27045
Couldn't classify 455, 573
Couldn't classify 1519, 1536
Sorry, prediction pasa_asmbl_46908.p1 fails validation.
(CAG)	 CC	455-573	GT	CAG
(AGG)	 AG	781-910	GT	AGG
(GCC)	 AG	1007-1186	GT	AAG
(AGA)	 AG	1284-1433	GT	AGG
(GGG)	 AG	1519-1536	AC	TGA
-recovered pasa_asmbl_46908.p1, internal, 781, 910
-recovered pasa_asmbl_46908.p1, internal, 1007, 1186
-recovered pasa_asmbl_46908.p1, internal, 1284, 1433
Valid prediction for GlimmerHMM_glimmerT_15063-T1
Valid prediction for snap_scaffold_6-snap.1324-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for GeneMark_model.25463_t
Valid prediction for GeneMark_model.25458_t
Valid prediction for GeneMark_model.25475_t
Valid prediction for GlimmerHMM_glimmerT_15037-T1
Valid prediction for GlimmerHMM_glimmerT_15040-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.25471_t
Valid prediction for GlimmerHMM_glimmerT_15053-T1
Valid prediction for GlimmerHMM_glimmerT_15057-T1
Valid prediction for HiQ_model.g10023.t1
Valid prediction for snap_scaffold_6-snap.1326-T1
Valid prediction for snap_scaffold_6-snap.1329-T1
Valid prediction for snap_scaffold_6-snap.1311-T1
Valid prediction for snap_scaffold_6-snap.1325-T1
Valid prediction for Augustus_model.g10021.t1
Valid prediction for GlimmerHMM_glimmerT_15046-T1
Valid prediction for GeneMark_model.25462_t
Valid prediction for GeneMark_model.25457_t
Valid prediction for GeneMark_model.25451_t
Valid prediction for GeneMark_model.25446_t
Valid prediction for GeneMark_model.25445_t
Valid prediction for snap_scaffold_6-snap.1312-T1
Valid prediction for snap_scaffold_6-snap.1320-T1
Valid prediction for GeneMark_model.25448_t
Valid prediction for Augustus_model.g10029.t1
Valid prediction for GeneMark_model.25455_t
Valid prediction for Augustus_model.g10025.t1
Valid prediction for snap_scaffold_6-snap.1327-T1
Valid prediction for GlimmerHMM_glimmerT_15068-T1
Valid prediction for GeneMark_model.25480_t
Valid prediction for GeneMark_model.25469_t
Couldn't classify 132758, 133411
Sorry, prediction pasa_asmbl_48374.p1 fails validation.
(AGC)	 GC	132758-133411	AG	ACA
Valid prediction for snap_scaffold_6-snap.1323-T1
Valid prediction for GlimmerHMM_glimmerT_15050-T1
Valid prediction for snap_scaffold_6-snap.1334-T1
Couldn't classify 138471, 138613
Couldn't classify 143606, 143771
Sorry, prediction pasa_asmbl_48373.p1 fails validation.
(AGA)	 CT	138471-138613	GT	GTG
(CGA)	 AG	139773-139869	GT	CTG
(CGC)	 AG	141210-141347	GT	TGG
(GAG)	 AG	142972-143507	GT	AGG
(TAG)	 AG	143606-143771	TG	GGT
-recovered pasa_asmbl_48373.p1, internal, 139773, 139869
-recovered pasa_asmbl_48373.p1, internal, 141210, 141347
-recovered pasa_asmbl_48373.p1, internal, 142972, 143507
Valid prediction for GeneMark_model.25476_t
Valid prediction for GeneMark_model.25474_t
Valid prediction for snap_scaffold_6-snap.1318-T1
Valid prediction for Augustus_model.g10020.t1
Valid prediction for GeneMark_model.25466_t
Valid prediction for Augustus_model.g10032.t1
Valid prediction for GlimmerHMM_glimmerT_15055-T1
Valid prediction for snap_scaffold_6-snap.1332-T1
Valid prediction for snap_scaffold_6-snap.1313-T1
Valid prediction for GlimmerHMM_glimmerT_15058-T1
Valid prediction for snap_scaffold_6-snap.1328-T1
Valid prediction for GeneMark_model.25461_t
Valid prediction for GeneMark_model.25478_t
Valid prediction for GeneMark_model.25467_t
Valid prediction for GeneMark_model.25470_t
Valid prediction for GeneMark_model.25464_t
Valid prediction for snap_scaffold_6-snap.1335-T1
Valid prediction for GeneMark_model.25459_t
Valid prediction for Augustus_model.g10026.t1
Valid prediction for GlimmerHMM_glimmerT_15062-T1
Couldn't classify 144075, 144166
Sorry, prediction pasa_asmbl_48371.p2 fails validation.
(CCA)	 AC	144075-144166	GT	AGG
(ACA)	 AG	145845-145994	GT	AGG
(GTA)	 AG	146104-146230	CA	GAC
-recovered pasa_asmbl_48371.p2, terminal, 146104, 146230
-recovered pasa_asmbl_48371.p2, internal, 145845, 145994

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 191543, rend_intergenic: 189071  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192603, rend_intergenic: 192437  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199360, rend_intergenic: 196563  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 202810, rend_intergenic: 202637  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208506, rend_intergenic: 206808  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236772, rend_intergenic: 210604  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 241858, rend_intergenic: 240020  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 246481, rend_intergenic: 242123  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 264338, rend_intergenic: 249188  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 266773
-exon list size: 651


building trellis

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47.5    
47.6    
47.8    
47.9    
48.1    
48.2    
48.4    
48.5    
48.7    
48.9    
49.0    
49.2    
49.3    
49.5    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.5    
50.7    
50.8    
51.0    
51.1    
51.3    
51.5    
51.6    
51.8    
51.9    
52.1    
52.2    
52.4    
52.5    
52.7    
52.8    
53.0    
53.1    
53.3    
53.4    
53.6    
53.8    
53.9    
54.1    
54.2    
54.4    
54.5    
54.7    
54.8    
55.0    
55.1    
55.3    
55.4    
55.6    
55.7    
55.9    
56.0    
56.2    
56.4    
56.5    
56.7    
56.8    
57.0    
57.1    
57.3    
57.4    
57.6    
57.7    
57.9    
58.0    
58.2    
58.3    
58.5    
58.7    
58.8    
59.0    
59.1    
59.3    
59.4    
59.6    
59.7    
59.9    
60.0    
60.2    
60.3    
60.5    
60.6    
60.8    
60.9    
61.1    
61.3    
61.4    
61.6    
61.7    
61.9    
62.0    
62.2    
62.3    
62.5    
62.6    
62.8    
62.9    
63.1    
63.2    
63.4    
63.6    
63.7    
63.9    
64.0    
64.2    
64.3    
64.5    
64.6    
64.8    
64.9    
65.1    
65.2    
65.4    
65.5    
65.7    
65.8    
66.0    
66.2    
66.3    
66.5    
66.6    
66.8    
66.9    
67.1    
67.2    
67.4    
67.5    
67.7    
67.8    
68.0    
68.1    
68.3    
68.5    
68.6    
68.8    
68.9    
69.1    
69.2    
69.4    
69.5    
69.7    
69.8    
70.0    
70.1    
70.3    
70.4    
70.6    
70.8    
70.9    
71.1    
71.2    
71.4    
71.5    
71.7    
71.8    
72.0    
72.1    
72.3    
72.4    
72.6    
72.7    
72.9    
73.0    
73.2    
73.4    
73.5    
73.7    
73.8    
74.0    
74.1    
74.3    
74.4    
74.6    
74.7    
74.9    
75.0    
75.2    
75.3    
75.5    
75.7    
75.8    
76.0    
76.1    
76.3    
76.4    
76.6    
76.7    
76.9    
77.0    
77.2    
77.3    
77.5    
77.6    
77.8    
77.9    
78.1    
78.3    
78.4    
78.6    
78.7    
78.9    
79.0    
79.2    
79.3    
79.5    
79.6    
79.8    
79.9    
80.1    
80.2    
80.4    
80.6    
80.7    
80.9    
81.0    
81.2    
81.3    
81.5    
81.6    
81.8    
81.9    
82.1    
82.2    
82.4    
82.5    
82.7    
82.8    
83.0    
83.2    
83.3    
83.5    
83.6    
83.8    
83.9    
84.1    
84.2    
84.4    
84.5    
84.7    
84.8    
85.0    
85.1    
85.3    
85.5    
85.6    
85.8    
85.9    
86.1    
86.2    
86.4    
86.5    
86.7    
86.8    
87.0    
87.1    
87.3    
87.4    
87.6    
87.7    
87.9    
88.1    
88.2    
88.4    
88.5    
88.7    
88.8    
89.0    
89.1    
89.3    
89.4    
89.6    
89.7    
89.9    
90.0    
90.2    
90.4    
90.5    
90.7    
90.8    
91.0    
91.1    
91.3    
91.4    
91.6    
91.7    
91.9    
92.0    
92.2    
92.3    
92.5    
92.6    
92.8    
93.0    
93.1    
93.3    
93.4    
93.6    
93.7    
93.9    
94.0    
94.2    
94.3    
94.5    
94.6    
94.8    
94.9    
95.1    
95.3    
95.4    
95.6    
95.7    
95.9    
96.0    
96.2    
96.3    
96.5    
96.6    
96.8    
96.9    
97.1    
97.2    
97.4    
97.5    
97.7    
97.9    
98.0    
98.2    
98.3    
98.5    
98.6    
98.8    
98.9    
99.1    
99.2    
99.4    
99.5    
99.7    
99.8    
-found 28 predictions from path traversal
Error with prediction: snap lend_intergenic: 191543, rend_intergenic: 189071  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192603, rend_intergenic: 192437  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199360, rend_intergenic: 196563  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 202810, rend_intergenic: 202637  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208506, rend_intergenic: 206808  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236772, rend_intergenic: 210604  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 241858, rend_intergenic: 240020  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 246481, rend_intergenic: 242123  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 264338, rend_intergenic: 249188  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 18 predictions persist after filtering for low support