-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_6/scaffold_6_413747-631153

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.23842_t
Valid prediction for snap_scaffold_6-snap.139-T1
Valid prediction for GlimmerHMM_glimmerT_14245-T1
Valid prediction for GeneMark_model.23791_t
Valid prediction for GeneMark_model.23830_t
Valid prediction for GeneMark_model.23800_t
Valid prediction for snap_scaffold_6-snap.115-T1
Couldn't classify 163985, 164219
Sorry, prediction pasa_asmbl_46621.p1 fails validation.
(GTG)	 AG	163985-164219	GT	AGG
(GTT)	 AG	164423-164568	GT	GGG
(GCT)	 AG	164990-165208	TA	GAT
-recovered pasa_asmbl_46621.p1, terminal, 164990, 165208
-recovered pasa_asmbl_46621.p1, internal, 163985, 164219
-recovered pasa_asmbl_46621.p1, internal, 164423, 164568
Valid prediction for snap_scaffold_6-snap.111-T1
Valid prediction for GeneMark_model.23814_t
Valid prediction for snap_scaffold_6-snap.117-T1
Valid prediction for GeneMark_model.23801_t
Valid prediction for GlimmerHMM_glimmerT_14257-T1
Valid prediction for snap_scaffold_6-snap.108-T1
Valid prediction for snap_scaffold_6-snap.106-T1
Valid prediction for GeneMark_model.23816_t
Valid prediction for snap_scaffold_6-snap.119-T1
Valid prediction for snap_scaffold_6-snap.97-T1
Valid prediction for GeneMark_model.23799_t
Valid prediction for GlimmerHMM_glimmerT_14246-T1
Valid prediction for GeneMark_model.23836_t
Valid prediction for GeneMark_model.23810_t
Valid prediction for CodingQuarry_transcript_54758-T1
Valid prediction for snap_scaffold_6-snap.93-T1
Valid prediction for Augustus_model.g9526.t1
Valid prediction for GeneMark_model.23832_t
Valid prediction for GeneMark_model.23822_t
Valid prediction for snap_scaffold_6-snap.113-T1
Valid prediction for snap_scaffold_6-snap.123-T1
Valid prediction for snap_scaffold_6-snap.127-T1
Valid prediction for GeneMark_model.23827_t
Valid prediction for snap_scaffold_6-snap.137-T1
Valid prediction for snap_scaffold_6-snap.102-T1
Valid prediction for GlimmerHMM_glimmerT_14250-T1
Valid prediction for snap_scaffold_6-snap.122-T1
Valid prediction for GeneMark_model.23845_t
Valid prediction for snap_scaffold_6-snap.121-T1
Valid prediction for snap_scaffold_6-snap.135-T1
Valid prediction for Augustus_model.g9525.t1
Valid prediction for GeneMark_model.23793_t
Valid prediction for snap_scaffold_6-snap.134-T1
Valid prediction for GeneMark_model.23797_t
Valid prediction for snap_scaffold_6-snap.138-T1
Couldn't classify 156885, 157112
Sorry, prediction pasa_asmbl_46615.p1 fails validation.
(ATG)	 AT	156419-156631	GT	AGG
(GAG)	 AG	156885-157112	GG	AAG
-recovered pasa_asmbl_46615.p1, initial, 156419, 156631
Valid prediction for snap_scaffold_6-snap.130-T1
Valid prediction for snap_scaffold_6-snap.105-T1
Valid prediction for GeneMark_model.23808_t
Couldn't classify 17714, 17933
Sorry, prediction pasa_asmbl_46612.p1 fails validation.
(CCC)	 CC	17714-17933	GT	AGG
(GGT)	 AG	18180-18334	GC	GAG
-recovered pasa_asmbl_46612.p1, terminal, 18180, 18334
-recovered pasa_asmbl_46612.p1, internal, 18180, 18334
Valid prediction for GeneMark_model.23805_t
Valid prediction for GeneMark_model.23806_t
Valid prediction for Augustus_model.g9520.t1
Valid prediction for GeneMark_model.23818_t
Valid prediction for snap_scaffold_6-snap.107-T1
Valid prediction for GeneMark_model.23821_t
Valid prediction for GeneMark_model.23837_t
Valid prediction for GlimmerHMM_glimmerT_14267-T1
Valid prediction for Augustus_model.g9519.t1
Valid prediction for GeneMark_model.23803_t
Valid prediction for Augustus_model.g9529.t1
Valid prediction for GeneMark_model.23795_t
Valid prediction for snap_scaffold_6-snap.128-T1
Valid prediction for GeneMark_model.23841_t
Couldn't classify 31490, 31569
Sorry, prediction pasa_asmbl_46613.p1 fails validation.
(TCC)	 TC	31490-31569	GT	CGG
(GTT)	 AG	31805-31888	GT	AGG
(GCT)	 AG	32914-33085	GT	AGG
(GTC)	 AG	33872-33976	GT	TGG
(TTG)	 AG	34527-34718	GT	AGG
(ATC)	 AG	35275-35370	GT	AAG
(GTT)	 AG	35794-35883	GT	AGG
(GCT)	 AG	36333-36472	GT	CGG
(GTA)	 AG	36948-37191	GT	AGG
(GTG)	 AG	37620-37774	GT	AGG
(GAC)	 AG	37862-37922	GT	AGG
(GTT)	 AG	38066-38194	GT	AGG
(GTG)	 AG	38570-38676	GT	AGG
(GTG)	 AG	39034-39139	GT	AGG
(GTT)	 AG	39285-39350	GT	AGG
(GTG)	 AG	39685-39819	AC	AGA
-recovered pasa_asmbl_46613.p1, terminal, 39685, 39819
-recovered pasa_asmbl_46613.p1, internal, 31805, 31888
-recovered pasa_asmbl_46613.p1, internal, 32914, 33085
-recovered pasa_asmbl_46613.p1, internal, 33872, 33976
-recovered pasa_asmbl_46613.p1, internal, 34527, 34718
-recovered pasa_asmbl_46613.p1, internal, 35275, 35370
-recovered pasa_asmbl_46613.p1, internal, 35794, 35883
-recovered pasa_asmbl_46613.p1, internal, 36333, 36472
-recovered pasa_asmbl_46613.p1, internal, 36948, 37191
-recovered pasa_asmbl_46613.p1, internal, 37620, 37774
-recovered pasa_asmbl_46613.p1, internal, 37862, 37922
-recovered pasa_asmbl_46613.p1, internal, 38066, 38194
-recovered pasa_asmbl_46613.p1, internal, 38570, 38676
-recovered pasa_asmbl_46613.p1, internal, 39034, 39139
-recovered pasa_asmbl_46613.p1, internal, 39285, 39350
Valid prediction for GeneMark_model.23839_t
Valid prediction for GeneMark_model.23824_t
Valid prediction for snap_scaffold_6-snap.131-T1
Valid prediction for GeneMark_model.23812_t
Valid prediction for snap_scaffold_6-snap.112-T1
Valid prediction for GlimmerHMM_glimmerT_14264-T1
Valid prediction for snap_scaffold_6-snap.101-T1
Valid prediction for GlimmerHMM_glimmerT_14259-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_14262-T1
Valid prediction for snap_scaffold_6-snap.133-T1
Valid prediction for snap_scaffold_6-snap.129-T1
Valid prediction for snap_scaffold_6-snap.124-T1
Valid prediction for GeneMark_model.23828_t
Valid prediction for GlimmerHMM_glimmerT_14255-T1
Valid prediction for Augustus_model.g9530.t1
Valid prediction for GeneMark_model.23840_t
Valid prediction for GlimmerHMM_glimmerT_14248-T1
Valid prediction for snap_scaffold_6-snap.114-T1
Valid prediction for GeneMark_model.23831_t
Valid prediction for GeneMark_model.23802_t
Couldn't classify 32109, 32210
Sorry, prediction pasa_asmbl_47991.p1 fails validation.
(ATG)	 CG	30451-30632	GT	AGG
(GTT)	 AG	31459-31582	GT	TGG
(GTG)	 AG	32109-32210	GG	AGG
-recovered pasa_asmbl_47991.p1, initial, 30451, 30632
-recovered pasa_asmbl_47991.p1, internal, 31459, 31582
Valid prediction for snap_scaffold_6-snap.99-T1
Valid prediction for GlimmerHMM_glimmerT_14260-T1
Valid prediction for Augustus_model.g9527.t1
Valid prediction for GlimmerHMM_glimmerT_14256-T1
Valid prediction for snap_scaffold_6-snap.132-T1
Valid prediction for GeneMark_model.23829_t
Valid prediction for snap_scaffold_6-snap.126-T1
Valid prediction for GlimmerHMM_glimmerT_14258-T1
Valid prediction for GeneMark_model.23834_t
Valid prediction for GlimmerHMM_glimmerT_14254-T1
Valid prediction for GlimmerHMM_glimmerT_14249-T1
Valid prediction for snap_scaffold_6-snap.118-T1
Valid prediction for GlimmerHMM_glimmerT_14253-T1
Valid prediction for Augustus_model.g9531.t1
Valid prediction for Augustus_model.g9521.t1
Valid prediction for GlimmerHMM_glimmerT_14251-T1
Valid prediction for snap_scaffold_6-snap.140-T1
Valid prediction for GeneMark_model.23792_t
Valid prediction for GeneMark_model.23790_t
Valid prediction for snap_scaffold_6-snap.95-T1
Valid prediction for snap_scaffold_6-snap.98-T1
Valid prediction for GeneMark_model.23811_t
Valid prediction for snap_scaffold_6-snap.96-T1
Couldn't classify 39366, 39455
Couldn't classify 42476, 42662
Sorry, prediction pasa_asmbl_49283.p1 fails validation.
(GAC)	 GC	39366-39455	GT	AGG
(GTG)	 AG	40091-40203	GT	AGG
(GAG)	 AG	40502-40631	GT	AGG
(ATC)	 AG	41011-41222	GT	AGG
(TGA)	 AG	41506-41723	GT	AGG
(GGA)	 AG	41965-42070	GT	CGG
(GGA)	 AG	42476-42662	AG	AGA
-recovered pasa_asmbl_49283.p1, internal, 40091, 40203
-recovered pasa_asmbl_49283.p1, internal, 40502, 40631
-recovered pasa_asmbl_49283.p1, internal, 41011, 41222
-recovered pasa_asmbl_49283.p1, internal, 41506, 41723
-recovered pasa_asmbl_49283.p1, internal, 41965, 42070
Valid prediction for snap_scaffold_6-snap.125-T1
Valid prediction for GeneMark_model.23826_t
Valid prediction for snap_scaffold_6-snap.136-T1
Couldn't classify 44594, 44738
Sorry, prediction pasa_asmbl_47988.p1 fails validation.
(ATG)	 CC	43005-43078	GT	AGG
(TGT)	 AG	43290-44194	GT	AGG
(GAT)	 AG	44306-44465	GT	AGG
(ACC)	 AG	44594-44738	GT	AGG
-recovered pasa_asmbl_47988.p1, initial, 43005, 43078
-recovered pasa_asmbl_47988.p1, internal, 43290, 44194
-recovered pasa_asmbl_47988.p1, internal, 44306, 44465
-recovered pasa_asmbl_47988.p1, internal, 44594, 44738
Valid prediction for GeneMark_model.23819_t
Valid prediction for GeneMark_model.23794_t
Valid prediction for GlimmerHMM_glimmerT_14247-T1
Valid prediction for GeneMark_model.23838_t
Valid prediction for snap_scaffold_6-snap.94-T1
Valid prediction for GeneMark_model.23825_t
Valid prediction for GeneMark_model.23847_t
Valid prediction for GlimmerHMM_glimmerT_14263-T1
Valid prediction for GlimmerHMM_glimmerT_14252-T1
Valid prediction for HiQ_model.g9524.t1
Valid prediction for snap_scaffold_6-snap.116-T1
Valid prediction for GeneMark_model.23813_t
Valid prediction for GeneMark_model.23833_t
Valid prediction for GlimmerHMM_glimmerT_14266-T1
Valid prediction for GeneMark_model.23796_t
Valid prediction for GeneMark_model.23817_t
Valid prediction for GeneMark_model.23798_t
Valid prediction for GlimmerHMM_glimmerT_14265-T1
Valid prediction for snap_scaffold_6-snap.109-T1
Valid prediction for Augustus_model.g9528.t1
Valid prediction for snap_scaffold_6-snap.103-T1
Valid prediction for GeneMark_model.23815_t
Valid prediction for snap_scaffold_6-snap.120-T1
Valid prediction for snap_scaffold_6-snap.104-T1
Valid prediction for pasa_asmbl_47984.p1
Valid prediction for GeneMark_model.23804_t
Valid prediction for GlimmerHMM_glimmerT_14268-T1
Valid prediction for GeneMark_model.23820_t
Valid prediction for snap_scaffold_6-snap.100-T1
Valid prediction for GeneMark_model.23844_t
Valid prediction for GeneMark_model.23835_t
Valid prediction for GeneMark_model.23807_t
Valid prediction for GlimmerHMM_glimmerT_14261-T1
Valid prediction for snap_scaffold_6-snap.110-T1
Valid prediction for GeneMark_model.23846_t
Valid prediction for CodingQuarry_transcript_54759-T1
Valid prediction for Augustus_model.g9523.t1
Valid prediction for GeneMark_model.23823_t
Valid prediction for GeneMark_model.23809_t
Couldn't classify 37244, 37271
Sorry, prediction pasa_asmbl_47989.p1 fails validation.
(ATG)	 TC	35158-35304	GT	AGG
(GGT)	 AG	35483-35807	GT	AGG
(AGG)	 AG	36207-36473	GT	GGG
(AAG)	 AG	36909-37020	GT	AGG
(TGA)	 AG	37244-37271	AA	ATA
-recovered pasa_asmbl_47989.p1, initial, 35158, 35304
-recovered pasa_asmbl_47989.p1, internal, 35483, 35807
-recovered pasa_asmbl_47989.p1, internal, 36207, 36473
-recovered pasa_asmbl_47989.p1, internal, 36909, 37020
Valid prediction for Augustus_model.g9522.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 18334, rend_intergenic: 2338  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39819, rend_intergenic: 20919  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46312, rend_intergenic: 45147  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77142, rend_intergenic: 56362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88039, rend_intergenic: 77473  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107812, rend_intergenic: 88909  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123271, rend_intergenic: 107987  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131194, rend_intergenic: 124994  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133636, rend_intergenic: 131949  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135940, rend_intergenic: 134804  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140645, rend_intergenic: 140317  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144324, rend_intergenic: 141282  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147838, rend_intergenic: 144545  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155847, rend_intergenic: 151906  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165208, rend_intergenic: 164469  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177418, rend_intergenic: 171268  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182250, rend_intergenic: 180360  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 187051, rend_intergenic: 183114  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190491, rend_intergenic: 189209  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198982, rend_intergenic: 196550  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 210638, rend_intergenic: 198982  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216078, rend_intergenic: 211835  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 217407
-exon list size: 938


building trellis

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43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.4    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 32 predictions from path traversal
Error with prediction: snap lend_intergenic: 18334, rend_intergenic: 2338  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39819, rend_intergenic: 20919  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46312, rend_intergenic: 45147  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77142, rend_intergenic: 56362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88039, rend_intergenic: 77473  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107812, rend_intergenic: 88909  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123271, rend_intergenic: 107987  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131194, rend_intergenic: 124994  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133636, rend_intergenic: 131949  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135940, rend_intergenic: 134804  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140645, rend_intergenic: 140317  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144324, rend_intergenic: 141282  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147838, rend_intergenic: 144545  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155847, rend_intergenic: 151906  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165208, rend_intergenic: 164469  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177418, rend_intergenic: 171268  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182250, rend_intergenic: 180360  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 187051, rend_intergenic: 183114  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190491, rend_intergenic: 189209  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198982, rend_intergenic: 196550  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 210638, rend_intergenic: 198982  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216078, rend_intergenic: 211835  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 18 predictions persist after filtering for low support