-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_6/scaffold_6_3421956-3673599

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_6-snap.824-T1
Valid prediction for snap_scaffold_6-snap.846-T1
Valid prediction for GlimmerHMM_glimmerT_14681-T1
Couldn't classify 126053, 126221
Sorry, prediction pasa_asmbl_46795.p1 fails validation.
(ATG)	 TC	120716-120793	GT	AGG
(ATC)	 AG	122195-122292	GT	GCG
(CTG)	 AG	123689-123808	GT	AGG
(CTA)	 AG	126053-126221	GT	GAG
-recovered pasa_asmbl_46795.p1, initial, 120716, 120793
-recovered pasa_asmbl_46795.p1, internal, 122195, 122292
-recovered pasa_asmbl_46795.p1, internal, 123689, 123808
-recovered pasa_asmbl_46795.p1, internal, 126053, 126221
Valid prediction for snap_scaffold_6-snap.815-T1
Valid prediction for GeneMark_model.24909_t
Valid prediction for GeneMark_model.24882_t
Valid prediction for GeneMark_model.24923_t
Valid prediction for GeneMark_model.24862_t
Valid prediction for GeneMark_model.24901_t
Valid prediction for GlimmerHMM_glimmerT_14692-T1
Valid prediction for GeneMark_model.24858_t
Valid prediction for snap_scaffold_6-snap.826-T1
Valid prediction for GeneMark_model.24840_t
Valid prediction for GeneMark_model.24852_t
Valid prediction for GeneMark_model.24913_t
Valid prediction for CodingQuarry_transcript_54850-T1
Valid prediction for HiQ_model.g9775.t1
Valid prediction for snap_scaffold_6-snap.799-T1
Valid prediction for GeneMark_model.24880_t
Valid prediction for snap_scaffold_6-snap.808-T1
Valid prediction for GeneMark_model.24873_t
Valid prediction for GeneMark_model.24867_t
Valid prediction for GeneMark_model.24857_t
Valid prediction for GlimmerHMM_glimmerT_14687-T1
Valid prediction for pasa_asmbl_46793.p1
Valid prediction for GlimmerHMM_glimmerT_14682-T1
Valid prediction for GeneMark_model.24910_t
Valid prediction for GeneMark_model.24912_t
Valid prediction for GeneMark_model.24914_t
Valid prediction for snap_scaffold_6-snap.830-T1
Valid prediction for GeneMark_model.24888_t
Valid prediction for snap_scaffold_6-snap.802-T1
Valid prediction for GeneMark_model.24897_t
Valid prediction for GlimmerHMM_glimmerT_14677-T1
Valid prediction for snap_scaffold_6-snap.821-T1
Valid prediction for GeneMark_model.24890_t
Valid prediction for GeneMark_model.24878_t
Valid prediction for GeneMark_model.24899_t
Couldn't classify 129608, 129934
Sorry, prediction pasa_asmbl_47896.p2 fails validation.
(CTC)	 CC	129608-129934	AT	GAA
Valid prediction for Augustus_model.g9779.t1
Valid prediction for snap_scaffold_6-snap.838-T1
Valid prediction for GeneMark_model.24845_t
Valid prediction for Augustus_model.g9778.t1
Valid prediction for GeneMark_model.24869_t
Valid prediction for GeneMark_model.24866_t
Valid prediction for snap_scaffold_6-snap.833-T1
Valid prediction for GeneMark_model.24843_t
Valid prediction for GeneMark_model.24895_t
Valid prediction for GlimmerHMM_glimmerT_14680-T1
Valid prediction for GeneMark_model.24838_t
Valid prediction for snap_scaffold_6-snap.835-T1
Valid prediction for snap_scaffold_6-snap.804-T1
Valid prediction for GlimmerHMM_glimmerT_14685-T1
Valid prediction for snap_scaffold_6-snap.813-T1
Valid prediction for GlimmerHMM_glimmerT_14679-T1
Valid prediction for GlimmerHMM_glimmerT_14664-T1
Valid prediction for GeneMark_model.24848_t
Valid prediction for GeneMark_model.24883_t
Valid prediction for snap_scaffold_6-snap.819-T1
Valid prediction for GeneMark_model.24861_t
Valid prediction for GlimmerHMM_glimmerT_14674-T1
Valid prediction for GeneMark_model.24872_t
Valid prediction for snap_scaffold_6-snap.796-T1
Valid prediction for GeneMark_model.24903_t
Valid prediction for GlimmerHMM_glimmerT_14693-T1
Valid prediction for GlimmerHMM_glimmerT_14694-T1
Valid prediction for GeneMark_model.24836_t
Valid prediction for GlimmerHMM_glimmerT_14672-T1
Valid prediction for GeneMark_model.24854_t
Valid prediction for GeneMark_model.24920_t
Valid prediction for GeneMark_model.24876_t
Valid prediction for GeneMark_model.24892_t
Valid prediction for GeneMark_model.24916_t
Valid prediction for snap_scaffold_6-snap.794-T1
Valid prediction for Augustus_model.g9789.t1
Valid prediction for snap_scaffold_6-snap.806-T1
Valid prediction for GeneMark_model.24842_t
Valid prediction for snap_scaffold_6-snap.800-T1
Valid prediction for snap_scaffold_6-snap.837-T1
Valid prediction for snap_scaffold_6-snap.812-T1
Valid prediction for GeneMark_model.24850_t
Valid prediction for GeneMark_model.24918_t
Valid prediction for Augustus_model.g9787.t1
Valid prediction for GeneMark_model.24905_t
Valid prediction for snap_scaffold_6-snap.841-T1
Valid prediction for GlimmerHMM_glimmerT_14689-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_6-snap.805-T1
Valid prediction for GeneMark_model.24865_t
Valid prediction for snap_scaffold_6-snap.817-T1
Valid prediction for snap_scaffold_6-snap.828-T1
Valid prediction for GeneMark_model.24856_t
Valid prediction for GeneMark_model.24853_t
Valid prediction for Augustus_model.g9772.t1
Valid prediction for GlimmerHMM_glimmerT_14666-T1
Valid prediction for GeneMark_model.24834_t
Couldn't classify 107268, 107363
Sorry, prediction pasa_asmbl_48216.p1 fails validation.
(TTG)	 AG	107268-107363	GT	GAG
(TTT)	 AG	107912-107994	GT	AGG
(GAA)	 AG	108407-108557	CC	AAC
-recovered pasa_asmbl_48216.p1, terminal, 108407, 108557
-recovered pasa_asmbl_48216.p1, internal, 107268, 107363
-recovered pasa_asmbl_48216.p1, internal, 107912, 107994
Valid prediction for CodingQuarry_transcript_54852-T1
Valid prediction for snap_scaffold_6-snap.822-T1
Valid prediction for snap_scaffold_6-snap.801-T1
Valid prediction for snap_scaffold_6-snap.847-T1
Valid prediction for GlimmerHMM_glimmerT_14668-T1
Valid prediction for GeneMark_model.24906_t
Valid prediction for GlimmerHMM_glimmerT_14675-T1
Valid prediction for Augustus_model.g9788.t1
Valid prediction for GlimmerHMM_glimmerT_14667-T1
Couldn't classify 232619, 232639
Sorry, prediction pasa_asmbl_48209.p1 fails validation.
(AAC)	 AC	232619-232639	GT	AGG
(GCT)	 AG	232726-232815	GT	AGG
(CCG)	 AG	233456-233677	TC	AGT
-recovered pasa_asmbl_48209.p1, terminal, 233456, 233677
-recovered pasa_asmbl_48209.p1, internal, 232726, 232815
Valid prediction for snap_scaffold_6-snap.797-T1
Valid prediction for CodingQuarry_transcript_54853-T1
Valid prediction for GeneMark_model.24851_t
Valid prediction for snap_scaffold_6-snap.810-T1
Valid prediction for snap_scaffold_6-snap.840-T1
Valid prediction for GeneMark_model.24921_t
Valid prediction for GeneMark_model.24884_t
Valid prediction for GlimmerHMM_glimmerT_14670-T1
Valid prediction for GeneMark_model.24893_t
Valid prediction for GeneMark_model.24875_t
Valid prediction for snap_scaffold_6-snap.795-T1
Valid prediction for snap_scaffold_6-snap.825-T1
Valid prediction for snap_scaffold_6-snap.834-T1
Valid prediction for GeneMark_model.24889_t
Valid prediction for GeneMark_model.24849_t
Valid prediction for pasa_asmbl_48219.p1
Valid prediction for GeneMark_model.24870_t
Valid prediction for snap_scaffold_6-snap.809-T1
Valid prediction for GlimmerHMM_glimmerT_14665-T1
Valid prediction for GeneMark_model.24844_t
Valid prediction for GeneMark_model.24860_t
Couldn't classify 103000, 103389
Sorry, prediction pasa_asmbl_48217.p1 fails validation.
(AAC)	 AC	103000-103389	GG	TAG
Valid prediction for snap_scaffold_6-snap.820-T1
Valid prediction for GeneMark_model.24847_t
Valid prediction for GeneMark_model.24874_t
Valid prediction for snap_scaffold_6-snap.823-T1
Valid prediction for GeneMark_model.24881_t
Valid prediction for GlimmerHMM_glimmerT_14684-T1
Valid prediction for snap_scaffold_6-snap.829-T1
Valid prediction for snap_scaffold_6-snap.814-T1
Valid prediction for GeneMark_model.24894_t
Valid prediction for Augustus_model.g9783.t1
Valid prediction for GeneMark_model.24902_t
Valid prediction for snap_scaffold_6-snap.842-T1
Valid prediction for GeneMark_model.24885_t
Valid prediction for snap_scaffold_6-snap.803-T1
Valid prediction for snap_scaffold_6-snap.818-T1
Valid prediction for snap_scaffold_6-snap.816-T1
Valid prediction for GeneMark_model.24839_t
Couldn't classify 146989, 147016
Sorry, prediction pasa_asmbl_49313.p2 fails validation.
(ACC)	 CC	146989-147016	GT	AGG
(GCT)	 AG	147319-147626	GG	GAG
-recovered pasa_asmbl_49313.p2, terminal, 147319, 147626
Valid prediction for snap_scaffold_6-snap.843-T1
Valid prediction for GlimmerHMM_glimmerT_14690-T1
Valid prediction for snap_scaffold_6-snap.831-T1
Valid prediction for Augustus_model.g9785.t1
Valid prediction for GeneMark_model.24911_t
Valid prediction for snap_scaffold_6-snap.827-T1
Valid prediction for HiQ_model.g9776.t1
Valid prediction for GeneMark_model.24898_t
Valid prediction for GeneMark_model.24917_t
Valid prediction for GlimmerHMM_glimmerT_14678-T1
Valid prediction for snap_scaffold_6-snap.845-T1
Valid prediction for GlimmerHMM_glimmerT_14683-T1
Valid prediction for GeneMark_model.24871_t
Valid prediction for Augustus_model.g9774.t1
Valid prediction for GeneMark_model.24841_t
Valid prediction for GeneMark_model.24922_t
Valid prediction for GeneMark_model.24859_t
Valid prediction for GeneMark_model.24833_t
Valid prediction for Augustus_model.g9782.t1
Valid prediction for GeneMark_model.24868_t
Valid prediction for Augustus_model.g9784.t1
Couldn't classify 146777, 146973
Sorry, prediction pasa_asmbl_48211.p1 fails validation.
(ATG)	 CC	140794-141224	GT	AGG
(GTC)	 AG	141461-141621	GT	CTG
(CTA)	 AG	143363-143475	GT	AGG
(GAG)	 AG	144502-144615	GT	AGG
(CCT)	 AG	145589-145685	GT	TGG
(GTG)	 AG	146124-146264	GT	AGG
(GTA)	 AG	146378-146407	GT	CGG
(GTG)	 AG	146777-146973	CC	CCC
-recovered pasa_asmbl_48211.p1, initial, 140794, 141224
-recovered pasa_asmbl_48211.p1, internal, 141461, 141621
-recovered pasa_asmbl_48211.p1, internal, 143363, 143475
-recovered pasa_asmbl_48211.p1, internal, 144502, 144615
-recovered pasa_asmbl_48211.p1, internal, 145589, 145685
-recovered pasa_asmbl_48211.p1, internal, 146124, 146264
-recovered pasa_asmbl_48211.p1, internal, 146378, 146407
Valid prediction for GeneMark_model.24846_t
Valid prediction for Augustus_model.g9777.t1
Valid prediction for Augustus_model.g9773.t1
Valid prediction for snap_scaffold_6-snap.836-T1
Valid prediction for GlimmerHMM_glimmerT_14695-T1
Valid prediction for GeneMark_model.24904_t
Valid prediction for snap_scaffold_6-snap.839-T1
Valid prediction for snap_scaffold_6-snap.798-T1
Valid prediction for GeneMark_model.24879_t
Valid prediction for GeneMark_model.24915_t
Valid prediction for GlimmerHMM_glimmerT_14671-T1
Valid prediction for GeneMark_model.24919_t
Valid prediction for GeneMark_model.24908_t
Valid prediction for GeneMark_model.24896_t
Valid prediction for GeneMark_model.24835_t
Valid prediction for GeneMark_model.24891_t
Valid prediction for snap_scaffold_6-snap.807-T1
Valid prediction for snap_scaffold_6-snap.832-T1
Valid prediction for GlimmerHMM_glimmerT_14696-T1
Valid prediction for GeneMark_model.24855_t
Valid prediction for snap_scaffold_6-snap.844-T1
Valid prediction for GlimmerHMM_glimmerT_14673-T1
Valid prediction for GeneMark_model.24877_t
Valid prediction for GlimmerHMM_glimmerT_14686-T1
Valid prediction for Augustus_model.g9786.t1
Valid prediction for GeneMark_model.24900_t
Valid prediction for Augustus_model.g9791.t1
Valid prediction for GeneMark_model.24864_t
Valid prediction for snap_scaffold_6-snap.811-T1
Valid prediction for Augustus_model.g9790.t1
Valid prediction for GlimmerHMM_glimmerT_14697-T1
Valid prediction for GlimmerHMM_glimmerT_14691-T1
Valid prediction for GlimmerHMM_glimmerT_14688-T1
Valid prediction for HiQ_model.g9781.t1
Valid prediction for GeneMark_model.24887_t
Valid prediction for GlimmerHMM_glimmerT_14676-T1
Valid prediction for Augustus_model.g9780.t1
Valid prediction for CodingQuarry_transcript_54851-T1
Valid prediction for GlimmerHMM_glimmerT_14669-T1
Valid prediction for GeneMark_model.24863_t
Couldn't classify 241893, 241986
Couldn't classify 242116, 242195
Sorry, prediction CodingQuarry_transcript_54849-T1 fails validation.
(ATG)	 CA	241893-241986	CC	GAC
(GGA)	 GA	242116-242195	GG	GAG
Valid prediction for GeneMark_model.24837_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9752, rend_intergenic: 7521  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24289, rend_intergenic: 9872  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42407, rend_intergenic: 24347  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42715, rend_intergenic: 42475  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75125, rend_intergenic: 43403  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98927, rend_intergenic: 98086  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106644, rend_intergenic: 102214  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112465, rend_intergenic: 106777  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132071, rend_intergenic: 113880  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141904, rend_intergenic: 132462  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143038, rend_intergenic: 142499  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147436, rend_intergenic: 143101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160266, rend_intergenic: 154227  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175466, rend_intergenic: 164295  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181401, rend_intergenic: 177349  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186264, rend_intergenic: 182087  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 196693, rend_intergenic: 188712  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203138, rend_intergenic: 200781  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216176, rend_intergenic: 204912  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217327, rend_intergenic: 216268  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217992, rend_intergenic: 217384  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 220068, rend_intergenic: 219035  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 221579, rend_intergenic: 220307  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 231106, rend_intergenic: 224261  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232124, rend_intergenic: 231746  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236720, rend_intergenic: 232272  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 244918, rend_intergenic: 240335  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 247007, rend_intergenic: 246681  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 166663, rend_intergenic: 166660  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 251644
-exon list size: 1125


building trellis

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28.0    
28.1    
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28.7    
28.7    
28.8    
28.9    
29.0    
29.1    
29.2    
29.3    
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29.5    
29.6    
29.7    
29.8    
29.9    
30.0    
30.1    
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30.3    
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30.5    
30.6    
30.7    
30.8    
30.9    
31.0    
31.1    
31.1    
31.2    
31.3    
31.4    
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31.6    
31.7    
31.8    
31.9    
31.9    
32.0    
32.1    
32.2    
32.3    
32.4    
32.5    
32.6    
32.7    
32.7    
32.8    
32.9    
33.0    
33.1    
33.2    
33.3    
33.4    
33.5    
33.5    
33.6    
33.7    
33.8    
33.9    
34.0    
34.1    
34.2    
34.3    
34.3    
34.4    
34.5    
34.6    
34.7    
34.8    
34.9    
35.0    
35.0    
35.1    
35.2    
35.3    
35.4    
35.5    
35.6    
35.7    
35.8    
35.8    
35.9    
36.0    
36.1    
36.2    
36.3    
36.4    
36.5    
36.6    
36.6    
36.7    
36.8    
36.9    
37.0    
37.1    
37.2    
37.3    
37.4    
37.4    
37.5    
37.6    
37.7    
37.8    
37.9    
38.0    
38.1    
38.2    
38.2    
38.3    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.0    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
39.8    
39.9    
40.0    
40.1    
40.2    
40.3    
40.4    
40.5    
40.6    
40.6    
40.7    
40.8    
40.9    
41.0    
41.1    
41.2    
41.3    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.1    
42.1    
42.2    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
42.9    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.3    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
46.9    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.6    
99.7    
99.8    
99.9    
-found 53 predictions from path traversal
Error with prediction: snap lend_intergenic: 9752, rend_intergenic: 7521  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24289, rend_intergenic: 9872  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42407, rend_intergenic: 24347  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42715, rend_intergenic: 42475  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75125, rend_intergenic: 43403  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98927, rend_intergenic: 98086  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106644, rend_intergenic: 102214  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112465, rend_intergenic: 106777  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132071, rend_intergenic: 113880  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141904, rend_intergenic: 132462  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143038, rend_intergenic: 142499  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147436, rend_intergenic: 143101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160266, rend_intergenic: 154227  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175466, rend_intergenic: 164295  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181401, rend_intergenic: 177349  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186264, rend_intergenic: 182087  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 196693, rend_intergenic: 188712  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203138, rend_intergenic: 200781  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216176, rend_intergenic: 204912  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217327, rend_intergenic: 216268  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217992, rend_intergenic: 217384  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 220068, rend_intergenic: 219035  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 221579, rend_intergenic: 220307  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 231106, rend_intergenic: 224261  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232124, rend_intergenic: 231746  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236720, rend_intergenic: 232272  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 244918, rend_intergenic: 240335  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 247007, rend_intergenic: 246681  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 166663, rend_intergenic: 166660  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 23 predictions persist after filtering for low support