-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_6/scaffold_6_18183418-18451982 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_6-snap.3865-T1 Valid prediction for GlimmerHMM_glimmerT_16944-T1 Valid prediction for snap_scaffold_6-snap.3892-T1 Valid prediction for GeneMark_model.28470_t Valid prediction for snap_scaffold_6-snap.3867-T1 Valid prediction for GeneMark_model.28404_t Valid prediction for snap_scaffold_6-snap.3868-T1 Valid prediction for GeneMark_model.28419_t Valid prediction for GeneMark_model.28406_t Valid prediction for GeneMark_model.28430_t Valid prediction for snap_scaffold_6-snap.3887-T1 Valid prediction for snap_scaffold_6-snap.3889-T1 Valid prediction for GeneMark_model.28403_t Valid prediction for GeneMark_model.28393_t Valid prediction for GeneMark_model.28475_t Valid prediction for GeneMark_model.28400_t Couldn't classify 37126, 37267 Couldn't classify 45714, 45767 Sorry, prediction pasa_asmbl_47764.p1 fails validation. (ATA) AG 37126-37267 GT AGG (CCT) AG 37551-37705 GT AGG (GGA) AG 38167-38241 GT AGG (ATC) AG 40168-40272 GT CGG (GTG) AG 40625-40759 GT AGG (TAT) AG 41491-41599 GT TGG (GTA) AG 42370-42436 GT AGG (GTT) AG 44351-44437 GT AGG (CCT) AG 45308-45455 GT TGG (ACG) AG 45714-45767 AA AGA -recovered pasa_asmbl_47764.p1, internal, 37126, 37267 -recovered pasa_asmbl_47764.p1, internal, 37551, 37705 -recovered pasa_asmbl_47764.p1, internal, 38167, 38241 -recovered pasa_asmbl_47764.p1, internal, 40168, 40272 -recovered pasa_asmbl_47764.p1, internal, 40625, 40759 -recovered pasa_asmbl_47764.p1, internal, 41491, 41599 -recovered pasa_asmbl_47764.p1, internal, 42370, 42436 -recovered pasa_asmbl_47764.p1, internal, 44351, 44437 -recovered pasa_asmbl_47764.p1, internal, 45308, 45455 Valid prediction for snap_scaffold_6-snap.3906-T1 Valid prediction for GeneMark_model.28465_t Valid prediction for GeneMark_model.28461_t Valid prediction for snap_scaffold_6-snap.3915-T1 Valid prediction for GeneMark_model.28439_t Valid prediction for GlimmerHMM_glimmerT_16973-T1 Valid prediction for GeneMark_model.28447_t Valid prediction for snap_scaffold_6-snap.3883-T1 Valid prediction for GeneMark_model.28425_t Valid prediction for snap_scaffold_6-snap.3878-T1 Sorry, intron length (8) is less than minimum required (10) Valid prediction for GeneMark_model.28436_t Valid prediction for GeneMark_model.28423_t Valid prediction for snap_scaffold_6-snap.3864-T1 Valid prediction for snap_scaffold_6-snap.3901-T1 Valid prediction for GeneMark_model.28389_t Valid prediction for GlimmerHMM_glimmerT_16956-T1 Valid prediction for GeneMark_model.28411_t Valid prediction for snap_scaffold_6-snap.3881-T1 Valid prediction for snap_scaffold_6-snap.3871-T1 Valid prediction for snap_scaffold_6-snap.3879-T1 Valid prediction for snap_scaffold_6-snap.3912-T1 Valid prediction for GeneMark_model.28401_t Valid prediction for snap_scaffold_6-snap.3926-T1 Valid prediction for GeneMark_model.28431_t Valid prediction for GeneMark_model.28391_t Valid prediction for snap_scaffold_6-snap.3908-T1 Valid prediction for GeneMark_model.28397_t Valid prediction for GeneMark_model.28454_t Valid prediction for GeneMark_model.28398_t Valid prediction for snap_scaffold_6-snap.3898-T1 Sorry, intron length (8) is less than minimum required (10) Valid prediction for Augustus_model.g11387.t1 Valid prediction for GeneMark_model.28441_t Valid prediction for GeneMark_model.28433_t Valid prediction for snap_scaffold_6-snap.3886-T1 Valid prediction for GeneMark_model.28413_t Valid prediction for GeneMark_model.28473_t Valid prediction for GlimmerHMM_glimmerT_16976-T1 Valid prediction for GlimmerHMM_glimmerT_16946-T1 Valid prediction for GlimmerHMM_glimmerT_16962-T1 Valid prediction for GeneMark_model.28395_t Valid prediction for snap_scaffold_6-snap.3870-T1 Valid prediction for GlimmerHMM_glimmerT_16954-T1 Valid prediction for GeneMark_model.28415_t Valid prediction for snap_scaffold_6-snap.3863-T1 Valid prediction for GlimmerHMM_glimmerT_16961-T1 Valid prediction for snap_scaffold_6-snap.3895-T1 Valid prediction for GlimmerHMM_glimmerT_16941-T1 Valid prediction for snap_scaffold_6-snap.3918-T1 Valid prediction for GeneMark_model.28472_t Valid prediction for GeneMark_model.28457_t Valid prediction for snap_scaffold_6-snap.3890-T1 Valid prediction for GeneMark_model.28417_t Valid prediction for snap_scaffold_6-snap.3921-T1 Valid prediction for GeneMark_model.28427_t Valid prediction for Augustus_model.g11388.t1 Valid prediction for snap_scaffold_6-snap.3866-T1 Valid prediction for snap_scaffold_6-snap.3922-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for snap_scaffold_6-snap.3891-T1 Valid prediction for GlimmerHMM_glimmerT_16952-T1 Valid prediction for GeneMark_model.28408_t Valid prediction for snap_scaffold_6-snap.3924-T1 Valid prediction for snap_scaffold_6-snap.3874-T1 Valid prediction for GeneMark_model.28421_t Valid prediction for snap_scaffold_6-snap.3873-T1 Valid prediction for GeneMark_model.28467_t Valid prediction for GlimmerHMM_glimmerT_16948-T1 Valid prediction for GeneMark_model.28409_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g11391.t1 Valid prediction for GlimmerHMM_glimmerT_16955-T1 Valid prediction for Augustus_model.g11390.t1 Valid prediction for GeneMark_model.28426_t Valid prediction for GlimmerHMM_glimmerT_16971-T1 Valid prediction for GeneMark_model.28455_t Valid prediction for GlimmerHMM_glimmerT_16972-T1 Valid prediction for Augustus_model.g11398.t1 Valid prediction for GeneMark_model.28452_t Valid prediction for GeneMark_model.28410_t Valid prediction for Augustus_model.g11399.t1 Valid prediction for Augustus_model.g11402.t1 Valid prediction for snap_scaffold_6-snap.3900-T1 Valid prediction for GeneMark_model.28442_t Valid prediction for GeneMark_model.28432_t Couldn't classify 79177, 79728 Sorry, prediction pasa_asmbl_49181.p1 fails validation. (ATG) TT 79177-79728 TC ATT Valid prediction for GlimmerHMM_glimmerT_16963-T1 Valid prediction for GlimmerHMM_glimmerT_16942-T1 Valid prediction for Augustus_model.g11392.t1 Valid prediction for GeneMark_model.28418_t Valid prediction for GeneMark_model.28471_t Valid prediction for Augustus_model.g11401.t1 Couldn't classify 97648, 98757 Sorry, prediction pasa_asmbl_49172.p1 fails validation. (TCG) CC 97648-98757 GG GAG Valid prediction for GeneMark_model.28394_t Couldn't classify 96331, 96957 Sorry, prediction pasa_asmbl_49173.p1 fails validation. (TTG) AA 96331-96957 CC AGC Valid prediction for GeneMark_model.28469_t Valid prediction for snap_scaffold_6-snap.3862-T1 Valid prediction for GeneMark_model.28468_t Valid prediction for snap_scaffold_6-snap.3899-T1 Valid prediction for GlimmerHMM_glimmerT_16967-T1 Valid prediction for GlimmerHMM_glimmerT_16953-T1 Valid prediction for GlimmerHMM_glimmerT_16959-T1 Valid prediction for GeneMark_model.28407_t Valid prediction for GeneMark_model.28435_t Valid prediction for GeneMark_model.28422_t Valid prediction for snap_scaffold_6-snap.3919-T1 Valid prediction for GlimmerHMM_glimmerT_16960-T1 Valid prediction for Augustus_model.g11394.t1 Valid prediction for snap_scaffold_6-snap.3880-T1 Valid prediction for snap_scaffold_6-snap.3888-T1 Valid prediction for GlimmerHMM_glimmerT_16977-T1 Valid prediction for GeneMark_model.28412_t Valid prediction for GlimmerHMM_glimmerT_16943-T1 Couldn't classify 83839, 84303 Sorry, prediction pasa_asmbl_49176.p1 fails validation. (AAA) AT 83839-84303 CC GAC Valid prediction for GlimmerHMM_glimmerT_16965-T1 Valid prediction for snap_scaffold_6-snap.3920-T1 Valid prediction for GlimmerHMM_glimmerT_16978-T1 Valid prediction for GlimmerHMM_glimmerT_16957-T1 Valid prediction for GeneMark_model.28414_t Valid prediction for GlimmerHMM_glimmerT_16970-T1 Valid prediction for snap_scaffold_6-snap.3896-T1 Valid prediction for snap_scaffold_6-snap.3884-T1 Valid prediction for GeneMark_model.28390_t Valid prediction for GeneMark_model.28460_t Valid prediction for GeneMark_model.28440_t Valid prediction for GeneMark_model.28405_t Valid prediction for GlimmerHMM_glimmerT_16947-T1 Valid prediction for snap_scaffold_6-snap.3869-T1 Valid prediction for snap_scaffold_6-snap.3885-T1 Valid prediction for Augustus_model.g11389.t1 Couldn't classify 232291, 232404 Couldn't classify 234884, 235021 Sorry, prediction pasa_asmbl_49169.p1 fails validation. (GAG) AG 232291-232404 GT TGG (ATC) AG 232934-233022 GT AAG (GGT) AG 233422-233539 GT TGG (TCT) AG 233793-233885 GT AGG (GTC) AG 234884-235021 GT GGG -recovered pasa_asmbl_49169.p1, internal, 232291, 232404 -recovered pasa_asmbl_49169.p1, internal, 232934, 233022 -recovered pasa_asmbl_49169.p1, internal, 233422, 233539 -recovered pasa_asmbl_49169.p1, internal, 233793, 233885 -recovered pasa_asmbl_49169.p1, internal, 234884, 235021 Valid prediction for snap_scaffold_6-snap.3876-T1 Valid prediction for snap_scaffold_6-snap.3893-T1 Valid prediction for snap_scaffold_6-snap.3897-T1 Couldn't classify 93976, 94986 Sorry, prediction pasa_asmbl_49175.p1 fails validation. (AGG) CC 93976-94986 GA CTG Valid prediction for Augustus_model.g11393.t1 Valid prediction for GeneMark_model.28428_t Valid prediction for snap_scaffold_6-snap.3913-T1 Valid prediction for GeneMark_model.28444_t Valid prediction for snap_scaffold_6-snap.3882-T1 Valid prediction for CodingQuarry_transcript_55279-T1 Valid prediction for snap_scaffold_6-snap.3916-T1 Valid prediction for GeneMark_model.28474_t Valid prediction for GlimmerHMM_glimmerT_16968-T1 Valid prediction for CodingQuarry_transcript_55278-T1 Valid prediction for GeneMark_model.28424_t Valid prediction for GlimmerHMM_glimmerT_16945-T1 Valid prediction for pasa_asmbl_49170.p1 Valid prediction for GeneMark_model.28416_t Valid prediction for GeneMark_model.28437_t Valid prediction for GeneMark_model.28450_t Valid prediction for GeneMark_model.28459_t Valid prediction for Augustus_model.g11395.t1 Valid prediction for GlimmerHMM_glimmerT_16966-T1 Valid prediction for GeneMark_model.28456_t Valid prediction for GeneMark_model.28445_t Valid prediction for Augustus_model.g11396.t1 Valid prediction for GeneMark_model.28464_t Valid prediction for GeneMark_model.28458_t Valid prediction for snap_scaffold_6-snap.3909-T1 Valid prediction for snap_scaffold_6-snap.3904-T1 Valid prediction for GlimmerHMM_glimmerT_16950-T1 Valid prediction for GlimmerHMM_glimmerT_16974-T1 Valid prediction for GlimmerHMM_glimmerT_16975-T1 Valid prediction for GlimmerHMM_glimmerT_16964-T1 Valid prediction for Augustus_model.g11397.t1 Couldn't classify 83092, 83727 Sorry, prediction pasa_asmbl_49177.p1 fails validation. (ATG) GT 83092-83727 AG AGA Valid prediction for snap_scaffold_6-snap.3902-T1 Valid prediction for GeneMark_model.28453_t Valid prediction for snap_scaffold_6-snap.3907-T1 Valid prediction for snap_scaffold_6-snap.3925-T1 Valid prediction for snap_scaffold_6-snap.3923-T1 Valid prediction for GlimmerHMM_glimmerT_16958-T1 Valid prediction for GeneMark_model.28396_t Valid prediction for GeneMark_model.28462_t Valid prediction for snap_scaffold_6-snap.3894-T1 Valid prediction for Augustus_model.g11400.t1 Valid prediction for snap_scaffold_6-snap.3914-T1 Valid prediction for GeneMark_model.28402_t Valid prediction for GeneMark_model.28434_t Valid prediction for snap_scaffold_6-snap.3917-T1 Valid prediction for snap_scaffold_6-snap.3905-T1 Valid prediction for GlimmerHMM_glimmerT_16951-T1 Valid prediction for snap_scaffold_6-snap.3872-T1 Couldn't classify 18794, 18876 Couldn't classify 19099, 19336 Sorry, prediction pasa_asmbl_49183.p1 fails validation. (ATC) AC 18794-18876 GT CGG (TTA) AG 19099-19336 AG GTA Valid prediction for snap_scaffold_6-snap.3903-T1 Valid prediction for GeneMark_model.28399_t Valid prediction for GlimmerHMM_glimmerT_16969-T1 Couldn't classify 95581, 96096 Sorry, prediction pasa_asmbl_49174.p1 fails validation. (CAG) AG 95581-96096 CC GGC Valid prediction for GeneMark_model.28388_t Valid prediction for snap_scaffold_6-snap.3911-T1 Valid prediction for GlimmerHMM_glimmerT_16940-T1 Valid prediction for GlimmerHMM_glimmerT_16949-T1 Valid prediction for snap_scaffold_6-snap.3877-T1 Valid prediction for GeneMark_model.28446_t Valid prediction for Augustus_model.g11385.t1 Valid prediction for GeneMark_model.28392_t Valid prediction for GeneMark_model.28429_t Valid prediction for snap_scaffold_6-snap.3875-T1 Valid prediction for snap_scaffold_6-snap.3910-T1 Valid prediction for GeneMark_model.28466_t Valid prediction for GeneMark_model.28420_t Couldn't classify 237674, 237710 Couldn't classify 242168, 242277 Sorry, prediction pasa_asmbl_49167.p1 fails validation. (CAG) AA 237674-237710 GT AGG (ACT) AG 239391-239533 GT AGG (CGT) AG 239726-239827 GT AGG (ATC) AG 240118-240225 GT AGG (GAG) AG 240994-241114 GT CCG (AGA) AG 242168-242277 AC TGA -recovered pasa_asmbl_49167.p1, internal, 239391, 239533 -recovered pasa_asmbl_49167.p1, internal, 239726, 239827 -recovered pasa_asmbl_49167.p1, internal, 240118, 240225 -recovered pasa_asmbl_49167.p1, internal, 240994, 241114 Valid prediction for GeneMark_model.28463_t Valid prediction for CodingQuarry_transcript_55280-T1 Valid prediction for Augustus_model.g11386.t1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 44805, rend_intergenic: 3423 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46281, rend_intergenic: 45069 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56733, rend_intergenic: 50047 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 63992, rend_intergenic: 61737 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74138, rend_intergenic: 64522 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85103, rend_intergenic: 76096 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 87109, rend_intergenic: 86531 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 99770, rend_intergenic: 91769 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 106454, rend_intergenic: 99792 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108976, rend_intergenic: 106454 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 117991, rend_intergenic: 109442 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 118717, rend_intergenic: 118195 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136518, rend_intergenic: 120543 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145973, rend_intergenic: 137762 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 152806, rend_intergenic: 146146 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 164264, rend_intergenic: 157264 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 167765, rend_intergenic: 164421 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 178526, rend_intergenic: 175815 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 193675, rend_intergenic: 191916 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 194641, rend_intergenic: 194185 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 195822, rend_intergenic: 195011 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203010, rend_intergenic: 196222 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 208639, rend_intergenic: 208278 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213408, rend_intergenic: 210198 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 221280, rend_intergenic: 220318 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 244661, rend_intergenic: 224027 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 250757, rend_intergenic: 244678 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 257586, rend_intergenic: 253524 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 261800, rend_intergenic: 260337 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 267802, rend_intergenic: 262183 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 268565 -exon list size: 1285 building trellis 0.1 0.2 0.2 0.3 0.4 0.5 0.5 0.6 0.7 0.8 0.9 0.9 1.0 1.1 1.2 1.2 1.3 1.4 1.5 1.6 1.6 1.7 1.8 1.9 1.9 2.0 2.1 2.2 2.3 2.3 2.4 2.5 2.6 2.6 2.7 2.8 2.9 3.0 3.0 3.1 3.2 3.3 3.3 3.4 3.5 3.6 3.7 3.7 3.8 3.9 4.0 4.0 4.1 4.2 4.3 4.4 4.4 4.5 4.6 4.7 4.7 4.8 4.9 5.0 5.1 5.1 5.2 5.3 5.4 5.4 5.5 5.6 5.7 5.7 5.8 5.9 6.0 6.1 6.1 6.2 6.3 6.4 6.4 6.5 6.6 6.7 6.8 6.8 6.9 7.0 7.1 7.1 7.2 7.3 7.4 7.5 7.5 7.6 7.7 7.8 7.8 7.9 8.0 8.1 8.2 8.2 8.3 8.4 8.5 8.5 8.6 8.7 8.8 8.9 8.9 9.0 9.1 9.2 9.2 9.3 9.4 9.5 9.6 9.6 9.7 9.8 9.9 9.9 10.0 10.1 10.2 10.3 10.3 10.4 10.5 10.6 10.6 10.7 10.8 10.9 11.0 11.0 11.1 11.2 11.3 11.3 11.4 11.5 11.6 11.7 11.7 11.8 11.9 12.0 12.0 12.1 12.2 12.3 12.4 12.4 12.5 12.6 12.7 12.7 12.8 12.9 13.0 13.1 13.1 13.2 13.3 13.4 13.4 13.5 13.6 13.7 13.8 13.8 13.9 14.0 14.1 14.1 14.2 14.3 14.4 14.5 14.5 14.6 14.7 14.8 14.8 14.9 15.0 15.1 15.2 15.2 15.3 15.4 15.5 15.5 15.6 15.7 15.8 15.9 15.9 16.0 16.1 16.2 16.2 16.3 16.4 16.5 16.6 16.6 16.7 16.8 16.9 16.9 17.0 17.1 17.2 17.2 17.3 17.4 17.5 17.6 17.6 17.7 17.8 17.9 17.9 18.0 18.1 18.2 18.3 18.3 18.4 18.5 18.6 18.6 18.7 18.8 18.9 19.0 19.0 19.1 19.2 19.3 19.3 19.4 19.5 19.6 19.7 19.7 19.8 19.9 20.0 20.0 20.1 20.2 20.3 20.4 20.4 20.5 20.6 20.7 20.7 20.8 20.9 21.0 21.1 21.1 21.2 21.3 21.4 21.4 21.5 21.6 21.7 21.8 21.8 21.9 22.0 22.1 22.1 22.2 22.3 22.4 22.5 22.5 22.6 22.7 22.8 22.8 22.9 23.0 23.1 23.2 23.2 23.3 23.4 23.5 23.5 23.6 23.7 23.8 23.9 23.9 24.0 24.1 24.2 24.2 24.3 24.4 24.5 24.6 24.6 24.7 24.8 24.9 24.9 25.0 25.1 25.2 25.3 25.3 25.4 25.5 25.6 25.6 25.7 25.8 25.9 26.0 26.0 26.1 26.2 26.3 26.3 26.4 26.5 26.6 26.7 26.7 26.8 26.9 27.0 27.0 27.1 27.2 27.3 27.4 27.4 27.5 27.6 27.7 27.7 27.8 27.9 28.0 28.0 28.1 28.2 28.3 28.4 28.4 28.5 28.6 28.7 28.7 28.8 28.9 29.0 29.1 29.1 29.2 29.3 29.4 29.4 29.5 29.6 29.7 29.8 29.8 29.9 30.0 30.1 30.1 30.2 30.3 30.4 30.5 30.5 30.6 30.7 30.8 30.8 30.9 31.0 31.1 31.2 31.2 31.3 31.4 31.5 31.5 31.6 31.7 31.8 31.9 31.9 32.0 32.1 32.2 32.2 32.3 32.4 32.5 32.6 32.6 32.7 32.8 32.9 32.9 33.0 33.1 33.2 33.3 33.3 33.4 33.5 33.6 33.6 33.7 33.8 33.9 34.0 34.0 34.1 34.2 34.3 34.3 34.4 34.5 34.6 34.7 34.7 34.8 34.9 35.0 35.0 35.1 35.2 35.3 35.4 35.4 35.5 35.6 35.7 35.7 35.8 35.9 36.0 36.1 36.1 36.2 36.3 36.4 36.4 36.5 36.6 36.7 36.8 36.8 36.9 37.0 37.1 37.1 37.2 37.3 37.4 37.5 37.5 37.6 37.7 37.8 37.8 37.9 38.0 38.1 38.2 38.2 38.3 38.4 38.5 38.5 38.6 38.7 38.8 38.9 38.9 39.0 39.1 39.2 39.2 39.3 39.4 39.5 39.5 39.6 39.7 39.8 39.9 39.9 40.0 40.1 40.2 40.2 40.3 40.4 40.5 40.6 40.6 40.7 40.8 40.9 40.9 41.0 41.1 41.2 41.3 41.3 41.4 41.5 41.6 41.6 41.7 41.8 41.9 42.0 42.0 42.1 42.2 42.3 42.3 42.4 42.5 42.6 42.7 42.7 42.8 42.9 43.0 43.0 43.1 43.2 43.3 43.4 43.4 43.5 43.6 43.7 43.7 43.8 43.9 44.0 44.1 44.1 44.2 44.3 44.4 44.4 44.5 44.6 44.7 44.8 44.8 44.9 45.0 45.1 45.1 45.2 45.3 45.4 45.5 45.5 45.6 45.7 45.8 45.8 45.9 46.0 46.1 46.2 46.2 46.3 46.4 46.5 46.5 46.6 46.7 46.8 46.9 46.9 47.0 47.1 47.2 47.2 47.3 47.4 47.5 47.6 47.6 47.7 47.8 47.9 47.9 48.0 48.1 48.2 48.3 48.3 48.4 48.5 48.6 48.6 48.7 48.8 48.9 49.0 49.0 49.1 49.2 49.3 49.3 49.4 49.5 49.6 49.7 49.7 49.8 49.9 50.0 50.0 50.1 50.2 50.3 50.3 50.4 50.5 50.6 50.7 50.7 50.8 50.9 51.0 51.0 51.1 51.2 51.3 51.4 51.4 51.5 51.6 51.7 51.7 51.8 51.9 52.0 52.1 52.1 52.2 52.3 52.4 52.4 52.5 52.6 52.7 52.8 52.8 52.9 53.0 53.1 53.1 53.2 53.3 53.4 53.5 53.5 53.6 53.7 53.8 53.8 53.9 54.0 54.1 54.2 54.2 54.3 54.4 54.5 54.5 54.6 54.7 54.8 54.9 54.9 55.0 55.1 55.2 55.2 55.3 55.4 55.5 55.6 55.6 55.7 55.8 55.9 55.9 56.0 56.1 56.2 56.3 56.3 56.4 56.5 56.6 56.6 56.7 56.8 56.9 57.0 57.0 57.1 57.2 57.3 57.3 57.4 57.5 57.6 57.7 57.7 57.8 57.9 58.0 58.0 58.1 58.2 58.3 58.4 58.4 58.5 58.6 58.7 58.7 58.8 58.9 59.0 59.1 59.1 59.2 59.3 59.4 59.4 59.5 59.6 59.7 59.8 59.8 59.9 60.0 60.1 60.1 60.2 60.3 60.4 60.5 60.5 60.6 60.7 60.8 60.8 60.9 61.0 61.1 61.1 61.2 61.3 61.4 61.5 61.5 61.6 61.7 61.8 61.8 61.9 62.0 62.1 62.2 62.2 62.3 62.4 62.5 62.5 62.6 62.7 62.8 62.9 62.9 63.0 63.1 63.2 63.2 63.3 63.4 63.5 63.6 63.6 63.7 63.8 63.9 63.9 64.0 64.1 64.2 64.3 64.3 64.4 64.5 64.6 64.6 64.7 64.8 64.9 65.0 65.0 65.1 65.2 65.3 65.3 65.4 65.5 65.6 65.7 65.7 65.8 65.9 66.0 66.0 66.1 66.2 66.3 66.4 66.4 66.5 66.6 66.7 66.7 66.8 66.9 67.0 67.1 67.1 67.2 67.3 67.4 67.4 67.5 67.6 67.7 67.8 67.8 67.9 68.0 68.1 68.1 68.2 68.3 68.4 68.5 68.5 68.6 68.7 68.8 68.8 68.9 69.0 69.1 69.2 69.2 69.3 69.4 69.5 69.5 69.6 69.7 69.8 69.9 69.9 70.0 70.1 70.2 70.2 70.3 70.4 70.5 70.6 70.6 70.7 70.8 70.9 70.9 71.0 71.1 71.2 71.3 71.3 71.4 71.5 71.6 71.6 71.7 71.8 71.9 72.0 72.0 72.1 72.2 72.3 72.3 72.4 72.5 72.6 72.6 72.7 72.8 72.9 73.0 73.0 73.1 73.2 73.3 73.3 73.4 73.5 73.6 73.7 73.7 73.8 73.9 74.0 74.0 74.1 74.2 74.3 74.4 74.4 74.5 74.6 74.7 74.7 74.8 74.9 75.0 75.1 75.1 75.2 75.3 75.4 75.4 75.5 75.6 75.7 75.8 75.8 75.9 76.0 76.1 76.1 76.2 76.3 76.4 76.5 76.5 76.6 76.7 76.8 76.8 76.9 77.0 77.1 77.2 77.2 77.3 77.4 77.5 77.5 77.6 77.7 77.8 77.9 77.9 78.0 78.1 78.2 78.2 78.3 78.4 78.5 78.6 78.6 78.7 78.8 78.9 78.9 79.0 79.1 79.2 79.3 79.3 79.4 79.5 79.6 79.6 79.7 79.8 79.9 80.0 80.0 80.1 80.2 80.3 80.3 80.4 80.5 80.6 80.7 80.7 80.8 80.9 81.0 81.0 81.1 81.2 81.3 81.4 81.4 81.5 81.6 81.7 81.7 81.8 81.9 82.0 82.1 82.1 82.2 82.3 82.4 82.4 82.5 82.6 82.7 82.8 82.8 82.9 83.0 83.1 83.1 83.2 83.3 83.4 83.4 83.5 83.6 83.7 83.8 83.8 83.9 84.0 84.1 84.1 84.2 84.3 84.4 84.5 84.5 84.6 84.7 84.8 84.8 84.9 85.0 85.1 85.2 85.2 85.3 85.4 85.5 85.5 85.6 85.7 85.8 85.9 85.9 86.0 86.1 86.2 86.2 86.3 86.4 86.5 86.6 86.6 86.7 86.8 86.9 86.9 87.0 87.1 87.2 87.3 87.3 87.4 87.5 87.6 87.6 87.7 87.8 87.9 88.0 88.0 88.1 88.2 88.3 88.3 88.4 88.5 88.6 88.7 88.7 88.8 88.9 89.0 89.0 89.1 89.2 89.3 89.4 89.4 89.5 89.6 89.7 89.7 89.8 89.9 90.0 90.1 90.1 90.2 90.3 90.4 90.4 90.5 90.6 90.7 90.8 90.8 90.9 91.0 91.1 91.1 91.2 91.3 91.4 91.5 91.5 91.6 91.7 91.8 91.8 91.9 92.0 92.1 92.2 92.2 92.3 92.4 92.5 92.5 92.6 92.7 92.8 92.9 92.9 93.0 93.1 93.2 93.2 93.3 93.4 93.5 93.6 93.6 93.7 93.8 93.9 93.9 94.0 94.1 94.2 94.3 94.3 94.4 94.5 94.6 94.6 94.7 94.8 94.9 94.9 95.0 95.1 95.2 95.3 95.3 95.4 95.5 95.6 95.6 95.7 95.8 95.9 96.0 96.0 96.1 96.2 96.3 96.3 96.4 96.5 96.6 96.7 96.7 96.8 96.9 97.0 97.0 97.1 97.2 97.3 97.4 97.4 97.5 97.6 97.7 97.7 97.8 97.9 98.0 98.1 98.1 98.2 98.3 98.4 98.4 98.5 98.6 98.7 98.8 98.8 98.9 99.0 99.1 99.1 99.2 99.3 99.4 99.5 99.5 99.6 99.7 99.8 99.8 99.9 -found 51 predictions from path traversal Error with prediction: snap lend_intergenic: 44805, rend_intergenic: 3423 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46281, rend_intergenic: 45069 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56733, rend_intergenic: 50047 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 63992, rend_intergenic: 61737 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74138, rend_intergenic: 64522 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85103, rend_intergenic: 76096 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 87109, rend_intergenic: 86531 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 99770, rend_intergenic: 91769 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 106454, rend_intergenic: 99792 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108976, rend_intergenic: 106454 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 117991, rend_intergenic: 109442 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 118717, rend_intergenic: 118195 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136518, rend_intergenic: 120543 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145973, rend_intergenic: 137762 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 152806, rend_intergenic: 146146 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 164264, rend_intergenic: 157264 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 167765, rend_intergenic: 164421 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 178526, rend_intergenic: 175815 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 193675, rend_intergenic: 191916 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 194641, rend_intergenic: 194185 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 195822, rend_intergenic: 195011 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203010, rend_intergenic: 196222 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 208639, rend_intergenic: 208278 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213408, rend_intergenic: 210198 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 221280, rend_intergenic: 220318 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 244661, rend_intergenic: 224027 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 250757, rend_intergenic: 244678 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 257586, rend_intergenic: 253524 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 261800, rend_intergenic: 260337 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 267802, rend_intergenic: 262183 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 30 predictions persist after filtering for low support