-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_6/scaffold_6_14446049-14646787

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_6-snap.3026-T1
Valid prediction for Augustus_model.g11025.t1
Valid prediction for GlimmerHMM_glimmerT_16338-T1
Valid prediction for GeneMark_model.27258_t
Valid prediction for GeneMark_model.27277_t
Valid prediction for GeneMark_model.27261_t
Couldn't classify 98070, 98498
Sorry, prediction pasa_asmbl_47561.p1 fails validation.
(CAC)	 CA	98070-98498	CT	AGC
Valid prediction for GeneMark_model.27278_t
Valid prediction for Augustus_model.g11013.t1
Valid prediction for snap_scaffold_6-snap.3061-T1
Valid prediction for GeneMark_model.27252_t
Valid prediction for GeneMark_model.27271_t
Valid prediction for snap_scaffold_6-snap.3046-T1
Valid prediction for snap_scaffold_6-snap.3030-T1
Valid prediction for snap_scaffold_6-snap.3065-T1
Couldn't classify 64488, 64904
Sorry, prediction pasa_asmbl_47557.p3 fails validation.
(ATG)	 GG	64488-64904	GG	CAG
Valid prediction for snap_scaffold_6-snap.3021-T1
Valid prediction for GeneMark_model.27288_t
Valid prediction for GeneMark_model.27308_t
Valid prediction for GlimmerHMM_glimmerT_16358-T1
Valid prediction for snap_scaffold_6-snap.3060-T1
Valid prediction for Augustus_model.g11011.t1
Valid prediction for Augustus_model.g11020.t1
Valid prediction for snap_scaffold_6-snap.3017-T1
Valid prediction for GeneMark_model.27300_t
Valid prediction for Augustus_model.g11026.t1
Valid prediction for GlimmerHMM_glimmerT_16343-T1
Valid prediction for GlimmerHMM_glimmerT_16349-T1
Valid prediction for GlimmerHMM_glimmerT_16335-T1
Valid prediction for snap_scaffold_6-snap.3027-T1
Valid prediction for GeneMark_model.27290_t
Valid prediction for GlimmerHMM_glimmerT_16356-T1
Couldn't classify 146533, 146608
Couldn't classify 148372, 148495
Sorry, prediction pasa_asmbl_47566.p1 fails validation.
(GGG)	 CA	146533-146608	GT	GAG
(CTC)	 AG	147215-147335	GT	AGG
(CTC)	 AG	148372-148495	GA	TGG
-recovered pasa_asmbl_47566.p1, internal, 147215, 147335
Valid prediction for GlimmerHMM_glimmerT_16341-T1
Valid prediction for GeneMark_model.27276_t
Valid prediction for GlimmerHMM_glimmerT_16337-T1
Valid prediction for snap_scaffold_6-snap.3022-T1
Valid prediction for GeneMark_model.27293_t
Valid prediction for GlimmerHMM_glimmerT_16350-T1
Valid prediction for GeneMark_model.27250_t
Valid prediction for GeneMark_model.27304_t
Valid prediction for CodingQuarry_transcript_55193-T1
Valid prediction for snap_scaffold_6-snap.3020-T1
Valid prediction for snap_scaffold_6-snap.3049-T1
Valid prediction for GeneMark_model.27274_t
Valid prediction for GeneMark_model.27267_t
Valid prediction for GeneMark_model.27310_t
Valid prediction for GeneMark_model.27269_t
Valid prediction for snap_scaffold_6-snap.3023-T1
Valid prediction for CodingQuarry_transcript_55192-T1
Valid prediction for GeneMark_model.27257_t
Valid prediction for snap_scaffold_6-snap.3048-T1
Valid prediction for GeneMark_model.27283_t
Valid prediction for GeneMark_model.27268_t
Valid prediction for snap_scaffold_6-snap.3045-T1
Valid prediction for snap_scaffold_6-snap.3037-T1
Valid prediction for GeneMark_model.27305_t
Valid prediction for snap_scaffold_6-snap.3051-T1
Valid prediction for Augustus_model.g11014.t1
Valid prediction for snap_scaffold_6-snap.3031-T1
Valid prediction for snap_scaffold_6-snap.3032-T1
Valid prediction for Augustus_model.g11023.t1
Valid prediction for snap_scaffold_6-snap.3062-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for Augustus_model.g11010.t1
Valid prediction for snap_scaffold_6-snap.3055-T1
Valid prediction for snap_scaffold_6-snap.3028-T1
Valid prediction for GlimmerHMM_glimmerT_16342-T1
Valid prediction for snap_scaffold_6-snap.3041-T1
Valid prediction for GeneMark_model.27280_t
Valid prediction for GeneMark_model.27255_t
Valid prediction for GlimmerHMM_glimmerT_16340-T1
Valid prediction for GeneMark_model.27286_t
Valid prediction for GeneMark_model.27295_t
Valid prediction for GeneMark_model.27253_t
Valid prediction for GlimmerHMM_glimmerT_16360-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_16361-T1
Valid prediction for GlimmerHMM_glimmerT_16354-T1
Valid prediction for GlimmerHMM_glimmerT_16332-T1
Valid prediction for snap_scaffold_6-snap.3040-T1
Valid prediction for GlimmerHMM_glimmerT_16363-T1
Valid prediction for snap_scaffold_6-snap.3058-T1
Valid prediction for GeneMark_model.27263_t
Valid prediction for GlimmerHMM_glimmerT_16336-T1
Valid prediction for GeneMark_model.27273_t
Valid prediction for GeneMark_model.27299_t
Valid prediction for GeneMark_model.27291_t
Valid prediction for snap_scaffold_6-snap.3054-T1
Valid prediction for CodingQuarry_transcript_55196-T1
Valid prediction for snap_scaffold_6-snap.3033-T1
Valid prediction for pasa_asmbl_48954.p2
Valid prediction for GeneMark_model.27287_t
Valid prediction for GlimmerHMM_glimmerT_16353-T1
Valid prediction for Augustus_model.g11007.t1
Valid prediction for GeneMark_model.27297_t
Valid prediction for snap_scaffold_6-snap.3034-T1
Valid prediction for Augustus_model.g11017.t1
Valid prediction for GlimmerHMM_glimmerT_16348-T1
Valid prediction for GlimmerHMM_glimmerT_16352-T1
Valid prediction for GeneMark_model.27260_t
Valid prediction for snap_scaffold_6-snap.3018-T1
Valid prediction for snap_scaffold_6-snap.3043-T1
Valid prediction for Augustus_model.g11022.t1
Valid prediction for GeneMark_model.27309_t
Valid prediction for Augustus_model.g11021.t1
Valid prediction for GlimmerHMM_glimmerT_16351-T1
Valid prediction for GeneMark_model.27284_t
Valid prediction for GeneMark_model.27302_t
Valid prediction for Augustus_model.g11018.t1
Valid prediction for GeneMark_model.27285_t
Valid prediction for GeneMark_model.27296_t
Valid prediction for snap_scaffold_6-snap.3064-T1
Valid prediction for snap_scaffold_6-snap.3053-T1
Valid prediction for GlimmerHMM_glimmerT_16346-T1
Couldn't classify 196695, 197110
Sorry, prediction pasa_asmbl_48943.p1 fails validation.
(TGT)	 AC	196695-197110	GT	AAG
(AGA)	 AG	197281-197590	CC	AAC
-recovered pasa_asmbl_48943.p1, terminal, 197281, 197590
Valid prediction for Augustus_model.g11012.t1
Valid prediction for GeneMark_model.27270_t
Valid prediction for GeneMark_model.27266_t
Valid prediction for GlimmerHMM_glimmerT_16347-T1
Valid prediction for GeneMark_model.27256_t
Valid prediction for GlimmerHMM_glimmerT_16339-T1
Valid prediction for GeneMark_model.27289_t
Valid prediction for Augustus_model.g11009.t1
Valid prediction for GeneMark_model.27279_t
Valid prediction for snap_scaffold_6-snap.3035-T1
Valid prediction for HiQ_model.g11029.t1
Valid prediction for GlimmerHMM_glimmerT_16359-T1
Valid prediction for snap_scaffold_6-snap.3029-T1
Valid prediction for snap_scaffold_6-snap.3019-T1
Valid prediction for GeneMark_model.27311_t
Valid prediction for snap_scaffold_6-snap.3042-T1
Valid prediction for snap_scaffold_6-snap.3059-T1
Valid prediction for GeneMark_model.27303_t
Valid prediction for GeneMark_model.27275_t
Valid prediction for GeneMark_model.27281_t
Valid prediction for CodingQuarry_transcript_55197-T1
Valid prediction for GeneMark_model.27251_t
Valid prediction for Augustus_model.g11019.t1
Couldn't classify 17472, 17598
Sorry, prediction pasa_asmbl_48957.p1 fails validation.
(ATG)	 AG	7131-7223	GT	AGG
(CTG)	 AG	7530-7874	GT	AGG
(GAG)	 AG	8132-8255	GT	AGG
(AGC)	 AG	8627-8798	GT	AGG
(GGG)	 AG	9573-9785	GT	AGG
(GAC)	 AG	10285-10429	GT	GGG
(TTC)	 AG	10704-10910	GT	AGG
(GCA)	 AG	11226-11330	GT	AGG
(GAG)	 AG	11450-11602	GT	AGG
(CTG)	 AG	11992-12240	GT	AGG
(ATG)	 AG	12479-12691	GT	ACG
(GTC)	 AG	13057-13269	GT	AGG
(GTG)	 AG	14233-14394	GT	AGG
(GCC)	 AG	14602-14730	GT	AGG
(GAC)	 AG	14832-14920	GT	AAG
(GTC)	 AG	15084-15207	GT	AGG
(GTG)	 AG	15563-15771	GT	AAG
(GGA)	 AG	16445-16553	GT	AGG
(ATG)	 AG	16724-16896	GT	AGG
(ACG)	 AG	17472-17598	GA	ACG
-recovered pasa_asmbl_48957.p1, initial, 7131, 7223
-recovered pasa_asmbl_48957.p1, initial, 12479, 12691
-recovered pasa_asmbl_48957.p1, initial, 16724, 16896
-recovered pasa_asmbl_48957.p1, internal, 7131, 7223
-recovered pasa_asmbl_48957.p1, internal, 7530, 7874
-recovered pasa_asmbl_48957.p1, internal, 8132, 8255
-recovered pasa_asmbl_48957.p1, internal, 8627, 8798
-recovered pasa_asmbl_48957.p1, internal, 9573, 9785
-recovered pasa_asmbl_48957.p1, internal, 10285, 10429
-recovered pasa_asmbl_48957.p1, internal, 10704, 10910
-recovered pasa_asmbl_48957.p1, internal, 11226, 11330
-recovered pasa_asmbl_48957.p1, internal, 11450, 11602
-recovered pasa_asmbl_48957.p1, internal, 11992, 12240
-recovered pasa_asmbl_48957.p1, internal, 12479, 12691
-recovered pasa_asmbl_48957.p1, internal, 13057, 13269
-recovered pasa_asmbl_48957.p1, internal, 14233, 14394
-recovered pasa_asmbl_48957.p1, internal, 14602, 14730
-recovered pasa_asmbl_48957.p1, internal, 14832, 14920
-recovered pasa_asmbl_48957.p1, internal, 15084, 15207
-recovered pasa_asmbl_48957.p1, internal, 15563, 15771
-recovered pasa_asmbl_48957.p1, internal, 16445, 16553
-recovered pasa_asmbl_48957.p1, internal, 16724, 16896
Valid prediction for GeneMark_model.27292_t
Valid prediction for snap_scaffold_6-snap.3050-T1
Valid prediction for GlimmerHMM_glimmerT_16355-T1
Valid prediction for snap_scaffold_6-snap.3047-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for Augustus_model.g11008.t1
Valid prediction for GeneMark_model.27265_t
Valid prediction for GeneMark_model.27294_t
Valid prediction for snap_scaffold_6-snap.3057-T1
Valid prediction for snap_scaffold_6-snap.3038-T1
Valid prediction for GeneMark_model.27272_t
Valid prediction for Augustus_model.g11024.t1
Valid prediction for GeneMark_model.27254_t
Valid prediction for GlimmerHMM_glimmerT_16345-T1
Valid prediction for GeneMark_model.27307_t
Valid prediction for GeneMark_model.27262_t
Valid prediction for GeneMark_model.27264_t
Valid prediction for Augustus_model.g11015.t1
Valid prediction for GlimmerHMM_glimmerT_16333-T1
Valid prediction for snap_scaffold_6-snap.3039-T1
Valid prediction for snap_scaffold_6-snap.3025-T1
Valid prediction for snap_scaffold_6-snap.3024-T1
Valid prediction for snap_scaffold_6-snap.3056-T1
Valid prediction for Augustus_model.g11028.t1
Valid prediction for GeneMark_model.27298_t
Valid prediction for GlimmerHMM_glimmerT_16357-T1
Valid prediction for GlimmerHMM_glimmerT_16362-T1
Valid prediction for Augustus_model.g11027.t1
Valid prediction for snap_scaffold_6-snap.3052-T1
Valid prediction for Augustus_model.g11016.t1
Valid prediction for snap_scaffold_6-snap.3044-T1
Sorry, intron length (4) is less than minimum required (10)
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.27282_t
Valid prediction for GlimmerHMM_glimmerT_16344-T1
Valid prediction for GeneMark_model.27259_t
Couldn't classify 22874, 22970
Sorry, prediction pasa_asmbl_48953.p1 fails validation.
(GGT)	 AG	22874-22970	GT	GGG
(GAG)	 AG	23061-23191	GT	AGG
(CAA)	 AG	23310-23459	GT	GGG
(TTA)	 AG	24284-24397	GA	GAG
-recovered pasa_asmbl_48953.p1, terminal, 24284, 24397
-recovered pasa_asmbl_48953.p1, internal, 22874, 22970
-recovered pasa_asmbl_48953.p1, internal, 23061, 23191
-recovered pasa_asmbl_48953.p1, internal, 23310, 23459
Valid prediction for snap_scaffold_6-snap.3063-T1
Valid prediction for GlimmerHMM_glimmerT_16334-T1
Valid prediction for snap_scaffold_6-snap.3036-T1
Valid prediction for GeneMark_model.27306_t
Valid prediction for snap_scaffold_6-snap.3066-T1
Valid prediction for GeneMark_model.27301_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9928, rend_intergenic: 5996  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 22306, rend_intergenic: 19199  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32172, rend_intergenic: 29274  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41672, rend_intergenic: 40422  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46734, rend_intergenic: 41858  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57843, rend_intergenic: 47912  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77391, rend_intergenic: 76848  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84904, rend_intergenic: 77696  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95456, rend_intergenic: 86143  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100949, rend_intergenic: 95691  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102137, rend_intergenic: 101331  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110131, rend_intergenic: 104167  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144106, rend_intergenic: 115401  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147381, rend_intergenic: 146172  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162329, rend_intergenic: 147559  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166329, rend_intergenic: 163260  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179517, rend_intergenic: 177067  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 195806, rend_intergenic: 183615  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 200739
-exon list size: 991


building trellis

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42.2    
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42.5    
42.6    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 51 predictions from path traversal
Error with prediction: snap lend_intergenic: 9928, rend_intergenic: 5996  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 22306, rend_intergenic: 19199  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32172, rend_intergenic: 29274  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41672, rend_intergenic: 40422  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46734, rend_intergenic: 41858  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57843, rend_intergenic: 47912  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77391, rend_intergenic: 76848  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84904, rend_intergenic: 77696  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95456, rend_intergenic: 86143  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100949, rend_intergenic: 95691  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102137, rend_intergenic: 101331  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110131, rend_intergenic: 104167  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144106, rend_intergenic: 115401  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147381, rend_intergenic: 146172  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162329, rend_intergenic: 147559  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166329, rend_intergenic: 163260  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179517, rend_intergenic: 177067  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 195806, rend_intergenic: 183615  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 23 predictions persist after filtering for low support