-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_6/scaffold_6_13517759-13745037 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_6-snap.2842-T1 Valid prediction for GeneMark_model.27033_t Valid prediction for Augustus_model.g10913.t1 Valid prediction for GlimmerHMM_glimmerT_16184-T1 Valid prediction for GlimmerHMM_glimmerT_16205-T1 Valid prediction for GeneMark_model.27053_t Valid prediction for pasa_asmbl_47468.p1 Valid prediction for HiQ_model.g10920.t1 Valid prediction for GlimmerHMM_glimmerT_16191-T1 Valid prediction for GlimmerHMM_glimmerT_16173-T1 Valid prediction for snap_scaffold_6-snap.2851-T1 Valid prediction for GlimmerHMM_glimmerT_16196-T1 Valid prediction for GlimmerHMM_glimmerT_16174-T1 Valid prediction for GeneMark_model.27023_t Valid prediction for Augustus_model.g10903.t1 Valid prediction for CodingQuarry_transcript_55160-T1 Valid prediction for snap_scaffold_6-snap.2838-T1 Valid prediction for snap_scaffold_6-snap.2828-T1 Valid prediction for Augustus_model.g10912.t1 Valid prediction for snap_scaffold_6-snap.2818-T1 Valid prediction for GlimmerHMM_glimmerT_16175-T1 Valid prediction for GeneMark_model.27035_t Valid prediction for snap_scaffold_6-snap.2819-T1 Valid prediction for GeneMark_model.27025_t Valid prediction for snap_scaffold_6-snap.2836-T1 Valid prediction for HiQ_model.g10910.t1 Valid prediction for snap_scaffold_6-snap.2849-T1 Valid prediction for snap_scaffold_6-snap.2817-T1 Valid prediction for GeneMark_model.27048_t Valid prediction for snap_scaffold_6-snap.2843-T1 Valid prediction for snap_scaffold_6-snap.2811-T1 Valid prediction for GeneMark_model.27060_t Valid prediction for GeneMark_model.27059_t Valid prediction for snap_scaffold_6-snap.2827-T1 Valid prediction for GlimmerHMM_glimmerT_16197-T1 Couldn't classify 172204, 172236 Sorry, prediction pasa_asmbl_47465.p1 fails validation. (ACC) GA 172204-172236 GT AGG (GGG) AG 173377-173463 GT AGG (GAG) AG 173548-173703 GT GGG (ATT) AG 173829-173892 GT CAG (TTG) AG 174021-174163 GT TGG (AAA) AG 174441-174528 GT CTG (GGT) AG 174661-174776 GT AGG (GAA) AG 174949-175099 GT CAG (GTC) AG 175361-175482 GT ATG (AGA) AG 175591-175674 TT AAT -recovered pasa_asmbl_47465.p1, terminal, 175591, 175674 -recovered pasa_asmbl_47465.p1, internal, 173377, 173463 -recovered pasa_asmbl_47465.p1, internal, 173548, 173703 -recovered pasa_asmbl_47465.p1, internal, 173829, 173892 -recovered pasa_asmbl_47465.p1, internal, 174021, 174163 -recovered pasa_asmbl_47465.p1, internal, 174441, 174528 -recovered pasa_asmbl_47465.p1, internal, 174661, 174776 -recovered pasa_asmbl_47465.p1, internal, 174949, 175099 -recovered pasa_asmbl_47465.p1, internal, 175361, 175482 Valid prediction for GlimmerHMM_glimmerT_16192-T1 Valid prediction for GlimmerHMM_glimmerT_16199-T1 Valid prediction for snap_scaffold_6-snap.2812-T1 Valid prediction for GlimmerHMM_glimmerT_16180-T1 Valid prediction for GeneMark_model.27028_t Valid prediction for GeneMark_model.27041_t Valid prediction for GeneMark_model.27038_t Valid prediction for snap_scaffold_6-snap.2814-T1 Valid prediction for GeneMark_model.27045_t Valid prediction for snap_scaffold_6-snap.2841-T1 Valid prediction for GeneMark_model.27031_t Valid prediction for GeneMark_model.27054_t Valid prediction for GeneMark_model.27037_t Valid prediction for GeneMark_model.27067_t Valid prediction for GeneMark_model.27056_t Valid prediction for Augustus_model.g10896.t1 Valid prediction for GeneMark_model.27021_t Valid prediction for GeneMark_model.27062_t Valid prediction for snap_scaffold_6-snap.2844-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_6-snap.2833-T1 Valid prediction for snap_scaffold_6-snap.2846-T1 Valid prediction for snap_scaffold_6-snap.2825-T1 Valid prediction for GeneMark_model.27030_t Valid prediction for GlimmerHMM_glimmerT_16194-T1 Valid prediction for GlimmerHMM_glimmerT_16202-T1 Valid prediction for Augustus_model.g10917.t1 Valid prediction for GeneMark_model.27042_t Couldn't classify 38164, 38712 Sorry, prediction pasa_asmbl_48873.p1 fails validation. (CAG) CT 38164-38712 CA AGC Couldn't classify 17153, 17241 Sorry, prediction pasa_asmbl_48881.p1 fails validation. (TCC) NN 17153-17241 GT AGG (GTA) AG 17446-17533 GT AGG (GAC) AG 17701-17805 GT AGG (GTG) AG 17953-18101 GT AGG (CTC) AG 18205-18296 GC AGG (GTC) AG 18393-18448 GT AGG (AAG) AG 18590-18988 GG GAG -recovered pasa_asmbl_48881.p1, terminal, 18590, 18988 -recovered pasa_asmbl_48881.p1, internal, 17446, 17533 -recovered pasa_asmbl_48881.p1, internal, 17701, 17805 -recovered pasa_asmbl_48881.p1, internal, 17953, 18101 -recovered pasa_asmbl_48881.p1, internal, 18205, 18296 -recovered pasa_asmbl_48881.p1, internal, 18393, 18448 Valid prediction for snap_scaffold_6-snap.2831-T1 Valid prediction for snap_scaffold_6-snap.2837-T1 Valid prediction for snap_scaffold_6-snap.2850-T1 Valid prediction for GeneMark_model.27029_t Valid prediction for GeneMark_model.27064_t Valid prediction for snap_scaffold_6-snap.2824-T1 Valid prediction for GlimmerHMM_glimmerT_16200-T1 Couldn't classify 159727, 159809 Sorry, prediction pasa_asmbl_48856.p1 fails validation. (CGA) AA 159727-159809 GT AGG (GAT) AG 159973-160105 GT TGG (ATG) AG 161254-161428 GT TGG (CTG) AG 161686-161851 GT AGG (TTA) AG 162114-162295 GT TGG (TTT) AG 162537-162669 GT AAG (GGT) AG 162955-163027 GT AGG (TTG) AG 163279-163372 GT AGG (TTG) AG 163706-163740 CT GAC -recovered pasa_asmbl_48856.p1, initial, 161254, 161428 -recovered pasa_asmbl_48856.p1, terminal, 163706, 163740 -recovered pasa_asmbl_48856.p1, internal, 159973, 160105 -recovered pasa_asmbl_48856.p1, internal, 161254, 161428 -recovered pasa_asmbl_48856.p1, internal, 161686, 161851 -recovered pasa_asmbl_48856.p1, internal, 162114, 162295 -recovered pasa_asmbl_48856.p1, internal, 162537, 162669 -recovered pasa_asmbl_48856.p1, internal, 162955, 163027 -recovered pasa_asmbl_48856.p1, internal, 163279, 163372 Valid prediction for snap_scaffold_6-snap.2840-T1 Valid prediction for GeneMark_model.27066_t Valid prediction for GlimmerHMM_glimmerT_16176-T1 Valid prediction for GeneMark_model.27039_t Couldn't classify 132979, 135466 Sorry, prediction pasa_asmbl_48861.p1 fails validation. (CCC) GC 132979-135466 GT ATG (TGA) AG 135555-135637 GT AGG (ATC) AG 136646-136936 GT AGG (TAC) AG 137465-137593 GT AGG (ATT) AG 138934-139092 TT GAT -recovered pasa_asmbl_48861.p1, terminal, 138934, 139092 -recovered pasa_asmbl_48861.p1, internal, 135555, 135637 -recovered pasa_asmbl_48861.p1, internal, 136646, 136936 -recovered pasa_asmbl_48861.p1, internal, 137465, 137593 Valid prediction for GlimmerHMM_glimmerT_16178-T1 Valid prediction for snap_scaffold_6-snap.2823-T1 Valid prediction for GeneMark_model.27055_t Valid prediction for GeneMark_model.27058_t Valid prediction for CodingQuarry_transcript_55156-T1 Couldn't classify 22060, 23238 Sorry, prediction pasa_asmbl_48879.p1 fails validation. (ATT) AA 22060-23238 CA GAC Valid prediction for Augustus_model.g10905.t1 Valid prediction for pasa_asmbl_48872.p1 Valid prediction for GlimmerHMM_glimmerT_16198-T1 Valid prediction for snap_scaffold_6-snap.2826-T1 Valid prediction for pasa_asmbl_48850.p6 Valid prediction for GeneMark_model.27026_t Valid prediction for CodingQuarry_transcript_55159-T1 Valid prediction for snap_scaffold_6-snap.2815-T1 Valid prediction for CodingQuarry_transcript_55157-T1 Couldn't classify 69407, 69468 Couldn't classify 72050, 72139 Couldn't classify 72856, 72979 Couldn't classify 73980, 74114 Sorry, prediction pasa_asmbl_49292.p1 fails validation. (GTG) AT 69407-69468 GT AGG (GTT) AG 71193-71275 GT GGG (GGA) AG 72050-72139 AT TCA (AGC) AC 72856-72979 GT AGG (GTA) AG 73257-73373 GT CAG (GCC) AG 73505-73574 GT AGG (CTG) AG 73980-74114 GT AGG -recovered pasa_asmbl_49292.p1, internal, 71193, 71275 -recovered pasa_asmbl_49292.p1, internal, 73257, 73373 -recovered pasa_asmbl_49292.p1, internal, 73505, 73574 -recovered pasa_asmbl_49292.p1, internal, 73980, 74114 Couldn't classify 151951, 151973 Sorry, prediction pasa_asmbl_48859.p1 fails validation. (ATG) TT 146823-146894 GT AGG (AGC) AG 149592-149653 GT AGG (CAA) AG 149757-149934 GT ATG (TTC) AG 150592-150772 GT AGG (GGG) AG 151951-151973 CT GGC -recovered pasa_asmbl_48859.p1, initial, 146823, 146894 -recovered pasa_asmbl_48859.p1, internal, 149592, 149653 -recovered pasa_asmbl_48859.p1, internal, 149757, 149934 -recovered pasa_asmbl_48859.p1, internal, 150592, 150772 Valid prediction for snap_scaffold_6-snap.2821-T1 Valid prediction for Augustus_model.g10914.t1 Couldn't classify 166809, 167095 Couldn't classify 169576, 169684 Sorry, prediction CodingQuarry_transcript_55151-T1 fails validation. (ATG) AC 166809-167095 CG GAC (TGA) GA 169576-169684 GT AGG (CAC) AG 170306-170374 GT AGG (ATG) AG 171099-171150 GT AGG (GTG) AG 171263-171299 GT AAG (GAC) AG 171444-171477 TC AAT -recovered CodingQuarry_transcript_55151-T1, initial, 171099, 171150 add_exon() Sorry, CodingQuarry_transcript_55151-T1 171263-171299-terminal-3 is invalid. -recovered CodingQuarry_transcript_55151-T1, terminal, 171263, 171299 -recovered CodingQuarry_transcript_55151-T1, terminal, 171444, 171477 -recovered CodingQuarry_transcript_55151-T1, internal, 170306, 170374 -recovered CodingQuarry_transcript_55151-T1, internal, 171099, 171150 -recovered CodingQuarry_transcript_55151-T1, internal, 171263, 171299 Valid prediction for Augustus_model.g10916.t1 Valid prediction for GlimmerHMM_glimmerT_16201-T1 Valid prediction for GlimmerHMM_glimmerT_16203-T1 Valid prediction for snap_scaffold_6-snap.2830-T1 Valid prediction for Augustus_model.g10897.t1 Valid prediction for GlimmerHMM_glimmerT_16206-T1 Valid prediction for GeneMark_model.27063_t Valid prediction for GlimmerHMM_glimmerT_16190-T1 Valid prediction for GlimmerHMM_glimmerT_16181-T1 Valid prediction for GlimmerHMM_glimmerT_16193-T1 Valid prediction for snap_scaffold_6-snap.2839-T1 Valid prediction for Augustus_model.g10900.t1 Valid prediction for snap_scaffold_6-snap.2848-T1 Valid prediction for GeneMark_model.27020_t Valid prediction for Augustus_model.g10906.t1 Valid prediction for GeneMark_model.27051_t Valid prediction for Augustus_model.g10904.t1 Valid prediction for Augustus_model.g10908.t1 Valid prediction for snap_scaffold_6-snap.2816-T1 Valid prediction for Augustus_model.g10902.t1 Valid prediction for GlimmerHMM_glimmerT_16195-T1 Valid prediction for GeneMark_model.27050_t Valid prediction for pasa_asmbl_48864.p1 Couldn't classify 152034, 152120 Couldn't classify 154628, 154906 Sorry, prediction pasa_asmbl_48858.p1 fails validation. (TCC) CC 152034-152120 GT AGG (GGT) AG 152471-152648 GT GGG (GTA) AG 153405-153469 GT AGG (AGA) AG 153713-153955 GT GGG (GTT) AG 154088-154190 GT AGG (CAA) AG 154301-154419 GT GGG (TAC) AG 154628-154906 GT CCG -recovered pasa_asmbl_48858.p1, internal, 152471, 152648 -recovered pasa_asmbl_48858.p1, internal, 153405, 153469 -recovered pasa_asmbl_48858.p1, internal, 153713, 153955 -recovered pasa_asmbl_48858.p1, internal, 154088, 154190 -recovered pasa_asmbl_48858.p1, internal, 154301, 154419 -recovered pasa_asmbl_48858.p1, internal, 154628, 154906 Valid prediction for GeneMark_model.27043_t Valid prediction for GlimmerHMM_glimmerT_16182-T1 Valid prediction for GeneMark_model.27047_t Valid prediction for HiQ_model.g10901.t1 Valid prediction for snap_scaffold_6-snap.2829-T1 Valid prediction for CodingQuarry_transcript_55154-T1 Valid prediction for GeneMark_model.27027_t Valid prediction for snap_scaffold_6-snap.2834-T1 Valid prediction for GeneMark_model.27024_t Valid prediction for GlimmerHMM_glimmerT_16187-T1 Valid prediction for GeneMark_model.27065_t Couldn't classify 63737, 63897 Couldn't classify 66027, 66165 Sorry, prediction pasa_asmbl_48870.p1 fails validation. (AAC) GC 63737-63897 GT GGG (GGA) AG 64354-64483 GT TGG (GGT) AG 64794-64895 GT GGG (ATC) AG 65021-65280 GT AGG (CGA) AG 66027-66165 CA CCC -recovered pasa_asmbl_48870.p1, internal, 64354, 64483 -recovered pasa_asmbl_48870.p1, internal, 64794, 64895 -recovered pasa_asmbl_48870.p1, internal, 65021, 65280 Valid prediction for GeneMark_model.27032_t Couldn't classify 115703, 116297 Sorry, prediction pasa_asmbl_48863.p1 fails validation. (AGG) AC 115703-116297 GT AGG (CCT) AG 116395-116514 GT CGG (ATG) AG 117120-117217 GT AGG (GAG) AG 117353-117484 GT AGG (GAT) AG 117718-117813 GT AGG (ACG) AG 118091-118225 GC GAG add_exon() Sorry, pasa_asmbl_48863.p1 117120-117217-initial-1 is invalid. -recovered pasa_asmbl_48863.p1, initial, 117120, 117217 -recovered pasa_asmbl_48863.p1, terminal, 118091, 118225 -recovered pasa_asmbl_48863.p1, internal, 116395, 116514 -recovered pasa_asmbl_48863.p1, internal, 117120, 117217 -recovered pasa_asmbl_48863.p1, internal, 117353, 117484 -recovered pasa_asmbl_48863.p1, internal, 117718, 117813 -recovered pasa_asmbl_48863.p1, internal, 118091, 118225 Valid prediction for snap_scaffold_6-snap.2845-T1 Valid prediction for GlimmerHMM_glimmerT_16179-T1 Valid prediction for GlimmerHMM_glimmerT_16185-T1 Couldn't classify 132166, 132840 Sorry, prediction pasa_asmbl_48862.p1 fails validation. (TCT) CC 132166-132840 GC TGG Valid prediction for GlimmerHMM_glimmerT_16189-T1 Valid prediction for Augustus_model.g10919.t1 Valid prediction for GeneMark_model.27052_t Couldn't classify 155484, 155513 Couldn't classify 159386, 159555 Sorry, prediction pasa_asmbl_48857.p1 fails validation. (CAC) AC 155484-155513 GT AGG (CAT) AG 155817-155945 GT TGG (GCG) AG 156837-156966 GT TGG (ATG) AG 157361-157506 GT AAG (TCT) AG 158015-158127 GT AGG (GGA) AG 158812-158922 GT ACG (TGA) AG 159023-159069 GT AGG (ATT) AG 159386-159555 AC CCA -recovered pasa_asmbl_48857.p1, initial, 157361, 157506 -recovered pasa_asmbl_48857.p1, internal, 155817, 155945 -recovered pasa_asmbl_48857.p1, internal, 156837, 156966 -recovered pasa_asmbl_48857.p1, internal, 157361, 157506 -recovered pasa_asmbl_48857.p1, internal, 158015, 158127 -recovered pasa_asmbl_48857.p1, internal, 158812, 158922 -recovered pasa_asmbl_48857.p1, internal, 159023, 159069 Couldn't classify 33481, 33529 Couldn't classify 33643, 33725 Sorry, prediction pasa_asmbl_48877.p1 fails validation. (ATG) AG 30184-30534 GT AGG (GAG) AG 30649-30809 GT AGG (GTG) AG 30923-31015 GT AGG (GCA) AG 31200-31335 GT CGG (GAG) AG 31444-31565 GT AAG (TAA) AG 31788-31901 GT GAG (CAA) AG 32011-32093 GT AGG (ACG) AG 32591-32756 GT AGG (ATT) AG 32872-32953 GT AAG (AGT) AG 33117-33299 GT AGG (GTG) AG 33481-33529 AT CTA (ACA) AC 33643-33725 TA AAT -recovered pasa_asmbl_48877.p1, initial, 30184, 30534 add_exon() Sorry, pasa_asmbl_48877.p1 31788-31901-terminal-1 is invalid. -recovered pasa_asmbl_48877.p1, terminal, 31788, 31901 -recovered pasa_asmbl_48877.p1, internal, 30184, 30534 -recovered pasa_asmbl_48877.p1, internal, 30649, 30809 -recovered pasa_asmbl_48877.p1, internal, 30923, 31015 -recovered pasa_asmbl_48877.p1, internal, 31200, 31335 -recovered pasa_asmbl_48877.p1, internal, 31444, 31565 -recovered pasa_asmbl_48877.p1, internal, 31788, 31901 -recovered pasa_asmbl_48877.p1, internal, 32011, 32093 -recovered pasa_asmbl_48877.p1, internal, 32591, 32756 -recovered pasa_asmbl_48877.p1, internal, 32872, 32953 -recovered pasa_asmbl_48877.p1, internal, 33117, 33299 Valid prediction for snap_scaffold_6-snap.2852-T1 Valid prediction for Augustus_model.g10909.t1 Valid prediction for Augustus_model.g10899.t1 Valid prediction for HiQ_model.g10915.t1 Valid prediction for snap_scaffold_6-snap.2835-T1 Valid prediction for snap_scaffold_6-snap.2847-T1 Valid prediction for snap_scaffold_6-snap.2820-T1 Valid prediction for CodingQuarry_transcript_55152-T1 Valid prediction for HiQ_model.g10907.t1 Valid prediction for GeneMark_model.27022_t Valid prediction for GlimmerHMM_glimmerT_16204-T1 Valid prediction for snap_scaffold_6-snap.2810-T1 Valid prediction for GeneMark_model.27044_t Valid prediction for GeneMark_model.27034_t Couldn't classify 66352, 66489 Couldn't classify 68455, 68595 Sorry, prediction pasa_asmbl_48869.p2 fails validation. (ACT) AG 66352-66489 GT TGG (GTG) AG 66598-66780 GT AGG (GCC) AG 67695-67792 GT AGG (CCC) AG 67936-68167 GT TGG (GCC) AG 68455-68595 GA GGG -recovered pasa_asmbl_48869.p2, internal, 66352, 66489 -recovered pasa_asmbl_48869.p2, internal, 66598, 66780 -recovered pasa_asmbl_48869.p2, internal, 67695, 67792 -recovered pasa_asmbl_48869.p2, internal, 67936, 68167 Valid prediction for snap_scaffold_6-snap.2822-T1 Valid prediction for Augustus_model.g10911.t1 Valid prediction for GlimmerHMM_glimmerT_16188-T1 Valid prediction for GlimmerHMM_glimmerT_16186-T1 Valid prediction for GeneMark_model.27019_t Valid prediction for pasa_asmbl_48867.p1 Valid prediction for GlimmerHMM_glimmerT_16183-T1 Valid prediction for HiQ_model.g10918.t1 Couldn't classify 33702, 33711 Sorry, prediction pasa_asmbl_48874.p1 fails validation. (ATT) TC 33702-33711 GT AGG (GTG) AG 33813-33916 GT AAG (GGT) AG 34027-34140 GT TGG (GTT) AG 34242-34331 GT TGG (GTG) AG 34465-34671 GT AGG (ATC) AG 34795-34924 GT TAG (CTC) AG 35079-35153 GT CGG (AGG) AG 35259-35340 GT GGG (CTC) AG 35437-35508 GT AGG (TGC) AG 35606-35690 GT GAG -recovered pasa_asmbl_48874.p1, terminal, 35606, 35690 -recovered pasa_asmbl_48874.p1, internal, 33813, 33916 -recovered pasa_asmbl_48874.p1, internal, 34027, 34140 -recovered pasa_asmbl_48874.p1, internal, 34242, 34331 -recovered pasa_asmbl_48874.p1, internal, 34465, 34671 -recovered pasa_asmbl_48874.p1, internal, 34795, 34924 -recovered pasa_asmbl_48874.p1, internal, 35079, 35153 -recovered pasa_asmbl_48874.p1, internal, 35259, 35340 -recovered pasa_asmbl_48874.p1, internal, 35437, 35508 -recovered pasa_asmbl_48874.p1, internal, 35606, 35690 Valid prediction for GeneMark_model.27040_t Valid prediction for CodingQuarry_transcript_55153-T1 Valid prediction for GeneMark_model.27057_t Valid prediction for snap_scaffold_6-snap.2813-T1 Valid prediction for GlimmerHMM_glimmerT_16177-T1 Valid prediction for Augustus_model.g10898.t1 Valid prediction for GeneMark_model.27046_t Valid prediction for snap_scaffold_6-snap.2832-T1 Valid prediction for CodingQuarry_transcript_55155-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 16987, rend_intergenic: 9230 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 18102, rend_intergenic: 17614 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21510, rend_intergenic: 20201 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 42297, rend_intergenic: 25407 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 44610, rend_intergenic: 42828 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163950, rend_intergenic: 152685 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213593, rend_intergenic: 208292 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 227279 -exon list size: 694 building trellis 0.1 0.3 0.4 0.6 0.7 0.9 1.0 1.1 1.3 1.4 1.6 1.7 1.9 2.0 2.2 2.3 2.4 2.6 2.7 2.9 3.0 3.2 3.3 3.4 3.6 3.7 3.9 4.0 4.2 4.3 4.5 4.6 4.7 4.9 5.0 5.2 5.3 5.5 5.6 5.7 5.9 6.0 6.2 6.3 6.5 6.6 6.8 6.9 7.0 7.2 7.3 7.5 7.6 7.8 7.9 8.0 8.2 8.3 8.5 8.6 8.8 8.9 9.1 9.2 9.3 9.5 9.6 9.8 9.9 10.1 10.2 10.3 10.5 10.6 10.8 10.9 11.1 11.2 11.4 11.5 11.6 11.8 11.9 12.1 12.2 12.4 12.5 12.6 12.8 12.9 13.1 13.2 13.4 13.5 13.6 13.8 13.9 14.1 14.2 14.4 14.5 14.7 14.8 14.9 15.1 15.2 15.4 15.5 15.7 15.8 15.9 16.1 16.2 16.4 16.5 16.7 16.8 17.0 17.1 17.2 17.4 17.5 17.7 17.8 18.0 18.1 18.2 18.4 18.5 18.7 18.8 19.0 19.1 19.3 19.4 19.5 19.7 19.8 20.0 20.1 20.3 20.4 20.5 20.7 20.8 21.0 21.1 21.3 21.4 21.6 21.7 21.8 22.0 22.1 22.3 22.4 22.6 22.7 22.8 23.0 23.1 23.3 23.4 23.6 23.7 23.9 24.0 24.1 24.3 24.4 24.6 24.7 24.9 25.0 25.1 25.3 25.4 25.6 25.7 25.9 26.0 26.1 26.3 26.4 26.6 26.7 26.9 27.0 27.2 27.3 27.4 27.6 27.7 27.9 28.0 28.2 28.3 28.4 28.6 28.7 28.9 29.0 29.2 29.3 29.5 29.6 29.7 29.9 30.0 30.2 30.3 30.5 30.6 30.7 30.9 31.0 31.2 31.3 31.5 31.6 31.8 31.9 32.0 32.2 32.3 32.5 32.6 32.8 32.9 33.0 33.2 33.3 33.5 33.6 33.8 33.9 34.1 34.2 34.3 34.5 34.6 34.8 34.9 35.1 35.2 35.3 35.5 35.6 35.8 35.9 36.1 36.2 36.4 36.5 36.6 36.8 36.9 37.1 37.2 37.4 37.5 37.6 37.8 37.9 38.1 38.2 38.4 38.5 38.6 38.8 38.9 39.1 39.2 39.4 39.5 39.7 39.8 39.9 40.1 40.2 40.4 40.5 40.7 40.8 40.9 41.1 41.2 41.4 41.5 41.7 41.8 42.0 42.1 42.2 42.4 42.5 42.7 42.8 43.0 43.1 43.2 43.4 43.5 43.7 43.8 44.0 44.1 44.3 44.4 44.5 44.7 44.8 45.0 45.1 45.3 45.4 45.5 45.7 45.8 46.0 46.1 46.3 46.4 46.6 46.7 46.8 47.0 47.1 47.3 47.4 47.6 47.7 47.8 48.0 48.1 48.3 48.4 48.6 48.7 48.9 49.0 49.1 49.3 49.4 49.6 49.7 49.9 50.0 50.1 50.3 50.4 50.6 50.7 50.9 51.0 51.1 51.3 51.4 51.6 51.7 51.9 52.0 52.2 52.3 52.4 52.6 52.7 52.9 53.0 53.2 53.3 53.4 53.6 53.7 53.9 54.0 54.2 54.3 54.5 54.6 54.7 54.9 55.0 55.2 55.3 55.5 55.6 55.7 55.9 56.0 56.2 56.3 56.5 56.6 56.8 56.9 57.0 57.2 57.3 57.5 57.6 57.8 57.9 58.0 58.2 58.3 58.5 58.6 58.8 58.9 59.1 59.2 59.3 59.5 59.6 59.8 59.9 60.1 60.2 60.3 60.5 60.6 60.8 60.9 61.1 61.2 61.4 61.5 61.6 61.8 61.9 62.1 62.2 62.4 62.5 62.6 62.8 62.9 63.1 63.2 63.4 63.5 63.6 63.8 63.9 64.1 64.2 64.4 64.5 64.7 64.8 64.9 65.1 65.2 65.4 65.5 65.7 65.8 65.9 66.1 66.2 66.4 66.5 66.7 66.8 67.0 67.1 67.2 67.4 67.5 67.7 67.8 68.0 68.1 68.2 68.4 68.5 68.7 68.8 69.0 69.1 69.3 69.4 69.5 69.7 69.8 70.0 70.1 70.3 70.4 70.5 70.7 70.8 71.0 71.1 71.3 71.4 71.6 71.7 71.8 72.0 72.1 72.3 72.4 72.6 72.7 72.8 73.0 73.1 73.3 73.4 73.6 73.7 73.9 74.0 74.1 74.3 74.4 74.6 74.7 74.9 75.0 75.1 75.3 75.4 75.6 75.7 75.9 76.0 76.1 76.3 76.4 76.6 76.7 76.9 77.0 77.2 77.3 77.4 77.6 77.7 77.9 78.0 78.2 78.3 78.4 78.6 78.7 78.9 79.0 79.2 79.3 79.5 79.6 79.7 79.9 80.0 80.2 80.3 80.5 80.6 80.7 80.9 81.0 81.2 81.3 81.5 81.6 81.8 81.9 82.0 82.2 82.3 82.5 82.6 82.8 82.9 83.0 83.2 83.3 83.5 83.6 83.8 83.9 84.1 84.2 84.3 84.5 84.6 84.8 84.9 85.1 85.2 85.3 85.5 85.6 85.8 85.9 86.1 86.2 86.4 86.5 86.6 86.8 86.9 87.1 87.2 87.4 87.5 87.6 87.8 87.9 88.1 88.2 88.4 88.5 88.6 88.8 88.9 89.1 89.2 89.4 89.5 89.7 89.8 89.9 90.1 90.2 90.4 90.5 90.7 90.8 90.9 91.1 91.2 91.4 91.5 91.7 91.8 92.0 92.1 92.2 92.4 92.5 92.7 92.8 93.0 93.1 93.2 93.4 93.5 93.7 93.8 94.0 94.1 94.3 94.4 94.5 94.7 94.8 95.0 95.1 95.3 95.4 95.5 95.7 95.8 96.0 96.1 96.3 96.4 96.6 96.7 96.8 97.0 97.1 97.3 97.4 97.6 97.7 97.8 98.0 98.1 98.3 98.4 98.6 98.7 98.9 99.0 99.1 99.3 99.4 99.6 99.7 99.9 -found 41 predictions from path traversal Error with prediction: snap lend_intergenic: 16987, rend_intergenic: 9230 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 18102, rend_intergenic: 17614 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21510, rend_intergenic: 20201 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 42297, rend_intergenic: 25407 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 44610, rend_intergenic: 42828 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163950, rend_intergenic: 152685 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213593, rend_intergenic: 208292 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 31 predictions persist after filtering for low support