-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_6/scaffold_6_12444399-12696115

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g10781.t1
Valid prediction for snap_scaffold_6-snap.2627-T1
Valid prediction for snap_scaffold_6-snap.2639-T1
Valid prediction for snap_scaffold_6-snap.2632-T1
Valid prediction for GlimmerHMM_glimmerT_16052-T1
Couldn't classify 72987, 73406
Sorry, prediction pasa_asmbl_47352.p1 fails validation.
(TGG)	 CG	72987-73406	AC	CCA
Valid prediction for GeneMark_model.26849_t
Valid prediction for snap_scaffold_6-snap.2647-T1
Valid prediction for GlimmerHMM_glimmerT_16038-T1
Valid prediction for GlimmerHMM_glimmerT_16054-T1
Valid prediction for GeneMark_model.26855_t
Valid prediction for snap_scaffold_6-snap.2640-T1
Valid prediction for GlimmerHMM_glimmerT_16034-T1
Valid prediction for CodingQuarry_transcript_55106-T1
Valid prediction for GlimmerHMM_glimmerT_16042-T1
Couldn't classify 33330, 33381
Sorry, prediction pasa_asmbl_47337.p1 fails validation.
(GTA)	 AG	33330-33381	GT	AGG
(GTG)	 AG	33603-33711	GT	CGG
(AAT)	 AG	34750-34830	GT	CGG
(AGA)	 AG	34981-35212	GT	CTG
(ACA)	 AG	35564-35708	GT	TGG
(ATT)	 AG	35801-35916	GT	ACG
(TGT)	 AG	37826-37987	TC	AAT
-recovered pasa_asmbl_47337.p1, terminal, 37826, 37987
-recovered pasa_asmbl_47337.p1, internal, 33330, 33381
-recovered pasa_asmbl_47337.p1, internal, 33603, 33711
-recovered pasa_asmbl_47337.p1, internal, 34750, 34830
-recovered pasa_asmbl_47337.p1, internal, 34981, 35212
-recovered pasa_asmbl_47337.p1, internal, 35564, 35708
-recovered pasa_asmbl_47337.p1, internal, 35801, 35916
Valid prediction for GlimmerHMM_glimmerT_16046-T1
Valid prediction for GlimmerHMM_glimmerT_16037-T1
Valid prediction for snap_scaffold_6-snap.2611-T1
Valid prediction for Augustus_model.g10787.t1
Valid prediction for snap_scaffold_6-snap.2612-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.26863_t
Valid prediction for snap_scaffold_6-snap.2630-T1
Valid prediction for snap_scaffold_6-snap.2619-T1
Valid prediction for GlimmerHMM_glimmerT_16028-T1
Valid prediction for snap_scaffold_6-snap.2649-T1
Valid prediction for snap_scaffold_6-snap.2655-T1
Valid prediction for GeneMark_model.26840_t
Valid prediction for snap_scaffold_6-snap.2607-T1
Valid prediction for GeneMark_model.26836_t
Valid prediction for CodingQuarry_transcript_55105-T1
Valid prediction for snap_scaffold_6-snap.2608-T1
Valid prediction for snap_scaffold_6-snap.2637-T1
Valid prediction for Augustus_model.g10770.t1
Couldn't classify 112009, 112824
Sorry, prediction pasa_asmbl_48765.p1 fails validation.
(TCT)	 CG	112009-112824	CT	ACC
Valid prediction for GlimmerHMM_glimmerT_16039-T1
Valid prediction for HiQ_model.g10756.t1
Valid prediction for GlimmerHMM_glimmerT_16025-T1
Couldn't classify 39984, 40120
Sorry, prediction pasa_asmbl_47338.p1 fails validation.
(ATG)	 CC	39482-39689	GT	TGG
(GTG)	 AG	39833-39898	GT	CGG
(TTT)	 AG	39984-40120	GT	AAG
-recovered pasa_asmbl_47338.p1, initial, 39482, 39689
-recovered pasa_asmbl_47338.p1, internal, 39833, 39898
-recovered pasa_asmbl_47338.p1, internal, 39984, 40120
Valid prediction for CodingQuarry_transcript_55116-T1
Valid prediction for Augustus_model.g10765.t1
Valid prediction for snap_scaffold_6-snap.2614-T1
Valid prediction for snap_scaffold_6-snap.2613-T1
Couldn't classify 198077, 198210
Couldn't classify 203464, 203575
Sorry, prediction pasa_asmbl_47912.p1 fails validation.
(AGG)	 GT	198077-198210	GT	AGG
(GAA)	 AG	198500-198620	GT	ATG
(TAT)	 AG	201018-201144	GT	CGG
(GCT)	 AG	201312-201465	GT	AGG
(GTT)	 AG	203464-203575	GT	AGG
-recovered pasa_asmbl_47912.p1, internal, 198500, 198620
-recovered pasa_asmbl_47912.p1, internal, 201018, 201144
-recovered pasa_asmbl_47912.p1, internal, 201312, 201465
-recovered pasa_asmbl_47912.p1, internal, 203464, 203575
Valid prediction for CodingQuarry_transcript_55107-T1
Valid prediction for HiQ_model.g10753.t1
Valid prediction for GlimmerHMM_glimmerT_16022-T1
Couldn't classify 209229, 209312
Sorry, prediction pasa_asmbl_47367.p1 fails validation.
(CAG)	 TT	209229-209312	GT	TGG
(CTC)	 AG	209427-209541	GT	AGG
(GGG)	 AG	209695-209753	GT	AGG
(ATA)	 AG	210068-210220	AA	GAA
-recovered pasa_asmbl_47367.p1, terminal, 210068, 210220
-recovered pasa_asmbl_47367.p1, internal, 209427, 209541
-recovered pasa_asmbl_47367.p1, internal, 209695, 209753
Valid prediction for Augustus_model.g10761.t1
Valid prediction for GlimmerHMM_glimmerT_16049-T1
Valid prediction for GlimmerHMM_glimmerT_16014-T1
Valid prediction for GeneMark_model.26844_t
Valid prediction for GlimmerHMM_glimmerT_16020-T1
Valid prediction for GeneMark_model.26846_t
Valid prediction for GlimmerHMM_glimmerT_16036-T1
Valid prediction for GlimmerHMM_glimmerT_16043-T1
Valid prediction for GlimmerHMM_glimmerT_16040-T1
Valid prediction for GeneMark_model.26865_t
Valid prediction for GeneMark_model.26852_t
Valid prediction for snap_scaffold_6-snap.2654-T1
Couldn't classify 177650, 177932
Sorry, prediction pasa_asmbl_47356.p1 fails validation.
(GTG)	 AT	177650-177932	GT	TGG
(GTA)	 AG	178039-178116	GT	AGG
(TCG)	 AG	178197-178300	GT	AGG
(AAC)	 AG	178405-178553	GT	TGG
(GTA)	 AG	178751-178840	GT	AAG
(GGC)	 AG	179078-179188	GT	GGG
(GGA)	 AG	179820-179941	GT	TGG
(AGG)	 AG	180180-180218	GT	AGG
(AAT)	 AG	180388-180447	GT	AGG
(GTA)	 AG	180711-180821	GT	GGG
(GTT)	 AG	181190-181304	GT	TGG
(TTT)	 AG	181530-181605	GT	AGG
(TCT)	 AG	181791-181937	TT	GAT
add_exon() Sorry, pasa_asmbl_47356.p1 178751-178840-terminal-1 is invalid.
-recovered pasa_asmbl_47356.p1, terminal, 178751, 178840
-recovered pasa_asmbl_47356.p1, terminal, 181791, 181937
-recovered pasa_asmbl_47356.p1, internal, 178039, 178116
-recovered pasa_asmbl_47356.p1, internal, 178197, 178300
-recovered pasa_asmbl_47356.p1, internal, 178405, 178553
-recovered pasa_asmbl_47356.p1, internal, 178751, 178840
-recovered pasa_asmbl_47356.p1, internal, 179078, 179188
-recovered pasa_asmbl_47356.p1, internal, 179820, 179941
-recovered pasa_asmbl_47356.p1, internal, 180180, 180218
-recovered pasa_asmbl_47356.p1, internal, 180388, 180447
-recovered pasa_asmbl_47356.p1, internal, 180711, 180821
-recovered pasa_asmbl_47356.p1, internal, 181190, 181304
-recovered pasa_asmbl_47356.p1, internal, 181530, 181605
Valid prediction for snap_scaffold_6-snap.2646-T1
Valid prediction for GeneMark_model.26866_t
Valid prediction for HiQ_model.g10774.t1
Valid prediction for GlimmerHMM_glimmerT_16015-T1
Couldn't classify 112627, 113049
Sorry, prediction pasa_asmbl_47354.p3 fails validation.
(GGT)	 CC	112627-113049	TG	GAT
Valid prediction for snap_scaffold_6-snap.2622-T1
Valid prediction for GlimmerHMM_glimmerT_16053-T1
Valid prediction for snap_scaffold_6-snap.2625-T1
Valid prediction for GeneMark_model.26847_t
Valid prediction for GeneMark_model.26858_t
Valid prediction for GeneMark_model.26834_t
Valid prediction for GlimmerHMM_glimmerT_16017-T1
Valid prediction for GlimmerHMM_glimmerT_16035-T1
Valid prediction for GeneMark_model.26850_t
Valid prediction for Augustus_model.g10755.t1
Valid prediction for CodingQuarry_transcript_55103-T1
Valid prediction for Augustus_model.g10757.t1
Valid prediction for GeneMark_model.26870_t
Valid prediction for GeneMark_model.26835_t
Valid prediction for HiQ_model.g10776.t1
Valid prediction for GlimmerHMM_glimmerT_16033-T1
Valid prediction for Augustus_model.g10752.t1
Valid prediction for snap_scaffold_6-snap.2642-T1
Valid prediction for GeneMark_model.26872_t
Valid prediction for snap_scaffold_6-snap.2645-T1
Valid prediction for snap_scaffold_6-snap.2633-T1
Valid prediction for GeneMark_model.26871_t
Valid prediction for Augustus_model.g10759.t1
Valid prediction for GeneMark_model.26861_t
Valid prediction for snap_scaffold_6-snap.2643-T1
Valid prediction for snap_scaffold_6-snap.2610-T1
Valid prediction for Augustus_model.g10769.t1
Valid prediction for Augustus_model.g10780.t1
Valid prediction for GlimmerHMM_glimmerT_16030-T1
Valid prediction for Augustus_model.g10768.t1
Valid prediction for GlimmerHMM_glimmerT_16047-T1
Valid prediction for GeneMark_model.26837_t
Valid prediction for GlimmerHMM_glimmerT_16031-T1
Valid prediction for GeneMark_model.26860_t
Valid prediction for GlimmerHMM_glimmerT_16019-T1
Valid prediction for Augustus_model.g10767.t1
Valid prediction for snap_scaffold_6-snap.2629-T1
Valid prediction for pasa_asmbl_47358.p1
Valid prediction for CodingQuarry_transcript_55104-T1
Valid prediction for Augustus_model.g10754.t1
Valid prediction for Augustus_model.g10779.t1
Couldn't classify 48279, 48347
Sorry, prediction pasa_asmbl_47346.p1 fails validation.
(AGT)	 AC	48279-48347	GT	GAG
(GTG)	 AG	48436-48578	GT	AAG
(CCC)	 AG	51109-51261	GT	AGG
(TCT)	 AG	52502-52691	GT	ATG
(GTG)	 AG	53172-53237	GT	TGG
(TAT)	 AG	53383-53481	GT	TGG
(GTT)	 AG	54215-54383	GT	CGG
(AGG)	 AG	55680-55750	GG	AAG
-recovered pasa_asmbl_47346.p1, terminal, 55680, 55750
-recovered pasa_asmbl_47346.p1, internal, 48436, 48578
-recovered pasa_asmbl_47346.p1, internal, 51109, 51261
-recovered pasa_asmbl_47346.p1, internal, 52502, 52691
-recovered pasa_asmbl_47346.p1, internal, 53172, 53237
-recovered pasa_asmbl_47346.p1, internal, 53383, 53481
-recovered pasa_asmbl_47346.p1, internal, 54215, 54383
Valid prediction for GlimmerHMM_glimmerT_16045-T1
Valid prediction for snap_scaffold_6-snap.2638-T1
Valid prediction for snap_scaffold_6-snap.2616-T1
Valid prediction for HiQ_model.g10777.t1
Valid prediction for GlimmerHMM_glimmerT_16013-T1
Valid prediction for snap_scaffold_6-snap.2631-T1
Valid prediction for CodingQuarry_transcript_55102-T1
Valid prediction for snap_scaffold_6-snap.2628-T1
Valid prediction for snap_scaffold_6-snap.2609-T1
Valid prediction for Augustus_model.g10771.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for CodingQuarry_transcript_55115-T1
Valid prediction for Augustus_model.g10784.t1
Valid prediction for Augustus_model.g10783.t1
Valid prediction for GeneMark_model.26838_t
Valid prediction for Augustus_model.g10782.t1
Valid prediction for GeneMark_model.26854_t
Valid prediction for snap_scaffold_6-snap.2652-T1
Valid prediction for Augustus_model.g10763.t1
Valid prediction for snap_scaffold_6-snap.2636-T1
Valid prediction for snap_scaffold_6-snap.2651-T1
Valid prediction for Augustus_model.g10762.t1
Valid prediction for Augustus_model.g10766.t1
Valid prediction for HiQ_model.g10773.t1
Valid prediction for GlimmerHMM_glimmerT_16044-T1
Valid prediction for Augustus_model.g10772.t1
Valid prediction for CodingQuarry_transcript_55110-T1
Valid prediction for GeneMark_model.26862_t
Valid prediction for snap_scaffold_6-snap.2650-T1
Valid prediction for snap_scaffold_6-snap.2623-T1
Couldn't classify 172114, 172168
Sorry, prediction pasa_asmbl_48748.p1 fails validation.
(CAG)	 TT	172114-172168	GT	AGG
(GCA)	 AG	172473-172636	GT	CGG
(CCC)	 AG	172767-172890	GT	TGG
(CTC)	 AG	174792-174904	GT	AGG
(AAT)	 AG	175039-175236	GT	AGG
(GTC)	 AG	175893-176064	GT	GGG
(CTG)	 AG	176168-176226	CC	GAC
-recovered pasa_asmbl_48748.p1, terminal, 176168, 176226
-recovered pasa_asmbl_48748.p1, internal, 172473, 172636
-recovered pasa_asmbl_48748.p1, internal, 172767, 172890
-recovered pasa_asmbl_48748.p1, internal, 174792, 174904
-recovered pasa_asmbl_48748.p1, internal, 175039, 175236
-recovered pasa_asmbl_48748.p1, internal, 175893, 176064
Valid prediction for snap_scaffold_6-snap.2615-T1
Valid prediction for GeneMark_model.26856_t
Valid prediction for Augustus_model.g10786.t1
Valid prediction for snap_scaffold_6-snap.2621-T1
Valid prediction for GlimmerHMM_glimmerT_16032-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_16021-T1
Valid prediction for GlimmerHMM_glimmerT_16027-T1
Valid prediction for GeneMark_model.26841_t
Valid prediction for snap_scaffold_6-snap.2653-T1
Couldn't classify 145968, 146256
Sorry, prediction pasa_asmbl_48761.p1 fails validation.
(ATG)	 AC	141257-141261	GT	AGG
(GAC)	 AG	141632-141677	GT	TTG
(CTG)	 AG	141889-141945	GT	TGG
(GGT)	 AG	142125-142196	GT	GGG
(TGT)	 AG	142522-142699	GT	AGG
(AAA)	 AG	143877-143998	GT	CAG
(TCT)	 AG	144233-144324	GT	ACG
(GGT)	 AG	145592-145801	GT	AGG
(GGA)	 AG	145968-146256	GG	GAG
-recovered pasa_asmbl_48761.p1, initial, 141257, 141261
-recovered pasa_asmbl_48761.p1, internal, 141632, 141677
-recovered pasa_asmbl_48761.p1, internal, 141889, 141945
-recovered pasa_asmbl_48761.p1, internal, 142125, 142196
-recovered pasa_asmbl_48761.p1, internal, 142522, 142699
-recovered pasa_asmbl_48761.p1, internal, 143877, 143998
-recovered pasa_asmbl_48761.p1, internal, 144233, 144324
-recovered pasa_asmbl_48761.p1, internal, 145592, 145801
Valid prediction for snap_scaffold_6-snap.2641-T1
Couldn't classify 160868, 161127
Couldn't classify 161458, 161631
Sorry, prediction pasa_asmbl_48754.p1 fails validation.
(CAG)	 CC	160868-161127	GT	GAG
(TCA)	 AG	161221-161290	GT	TGG
(TGT)	 AG	161458-161631	GT	AGG
-recovered pasa_asmbl_48754.p1, internal, 161221, 161290
-recovered pasa_asmbl_48754.p1, internal, 161458, 161631
Valid prediction for snap_scaffold_6-snap.2626-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for CodingQuarry_transcript_55113-T1
Valid prediction for Augustus_model.g10760.t1
Valid prediction for CodingQuarry_transcript_55111-T1
Valid prediction for snap_scaffold_6-snap.2620-T1
Valid prediction for GlimmerHMM_glimmerT_16016-T1
Valid prediction for pasa_asmbl_48774.p1
Valid prediction for GeneMark_model.26851_t
Valid prediction for GeneMark_model.26867_t
Valid prediction for GlimmerHMM_glimmerT_16026-T1
Valid prediction for snap_scaffold_6-snap.2644-T1
Valid prediction for GlimmerHMM_glimmerT_16041-T1
Valid prediction for pasa_asmbl_48757.p1
Valid prediction for Augustus_model.g10778.t1
Valid prediction for HiQ_model.g10775.t1
Valid prediction for GeneMark_model.26848_t
Valid prediction for GeneMark_model.26869_t
Valid prediction for GeneMark_model.26839_t
Valid prediction for CodingQuarry_transcript_55108-T1
Valid prediction for GeneMark_model.26859_t
Valid prediction for GeneMark_model.26864_t
Valid prediction for snap_scaffold_6-snap.2635-T1
Couldn't classify 247864, 247942
Couldn't classify 250215, 250342
Sorry, prediction pasa_asmbl_48744.p1 fails validation.
(CAG)	 TT	247864-247942	GT	AAG
(CCT)	 AG	248137-248209	GT	AGG
(TAT)	 AG	250023-250087	GT	AGG
(CTG)	 AG	250215-250342	AG	ACA
-recovered pasa_asmbl_48744.p1, terminal, 250023, 250087
-recovered pasa_asmbl_48744.p1, internal, 248137, 248209
-recovered pasa_asmbl_48744.p1, internal, 250023, 250087
Valid prediction for Augustus_model.g10758.t1
Valid prediction for CodingQuarry_transcript_55109-T1
Valid prediction for GeneMark_model.26843_t
Valid prediction for Augustus_model.g10764.t1
Valid prediction for GeneMark_model.26868_t
Valid prediction for GlimmerHMM_glimmerT_16048-T1
Valid prediction for Augustus_model.g10785.t1
Valid prediction for snap_scaffold_6-snap.2617-T1
Valid prediction for GlimmerHMM_glimmerT_16024-T1
Valid prediction for GlimmerHMM_glimmerT_16023-T1
Valid prediction for GlimmerHMM_glimmerT_16029-T1
Valid prediction for snap_scaffold_6-snap.2648-T1
Valid prediction for snap_scaffold_6-snap.2618-T1
Valid prediction for GlimmerHMM_glimmerT_16051-T1
Valid prediction for GeneMark_model.26845_t
Valid prediction for GeneMark_model.26857_t
Valid prediction for GlimmerHMM_glimmerT_16018-T1
Valid prediction for snap_scaffold_6-snap.2634-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_6-snap.2624-T1
Valid prediction for GlimmerHMM_glimmerT_16050-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 79592, rend_intergenic: 77430  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205511, rend_intergenic: 203897  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 251717
-exon list size: 542


building trellis

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42.5    
42.6    
42.8    
43.0    
43.2    
43.4    
43.6    
43.8    
43.9    
44.1    
44.3    
44.5    
44.7    
44.9    
45.0    
45.2    
45.4    
45.6    
45.8    
46.0    
46.1    
46.3    
46.5    
46.7    
46.9    
47.1    
47.2    
47.4    
47.6    
47.8    
48.0    
48.2    
48.3    
48.5    
48.7    
48.9    
49.1    
49.3    
49.4    
49.6    
49.8    
50.0    
50.2    
50.4    
50.6    
50.7    
50.9    
51.1    
51.3    
51.5    
51.7    
51.8    
52.0    
52.2    
52.4    
52.6    
52.8    
52.9    
53.1    
53.3    
53.5    
53.7    
53.9    
54.0    
54.2    
54.4    
54.6    
54.8    
55.0    
55.1    
55.3    
55.5    
55.7    
55.9    
56.1    
56.2    
56.4    
56.6    
56.8    
57.0    
57.2    
57.4    
57.5    
57.7    
57.9    
58.1    
58.3    
58.5    
58.6    
58.8    
59.0    
59.2    
59.4    
59.6    
59.7    
59.9    
60.1    
60.3    
60.5    
60.7    
60.8    
61.0    
61.2    
61.4    
61.6    
61.8    
61.9    
62.1    
62.3    
62.5    
62.7    
62.9    
63.1    
63.2    
63.4    
63.6    
63.8    
64.0    
64.2    
64.3    
64.5    
64.7    
64.9    
65.1    
65.3    
65.4    
65.6    
65.8    
66.0    
66.2    
66.4    
66.5    
66.7    
66.9    
67.1    
67.3    
67.5    
67.6    
67.8    
68.0    
68.2    
68.4    
68.6    
68.8    
68.9    
69.1    
69.3    
69.5    
69.7    
69.9    
70.0    
70.2    
70.4    
70.6    
70.8    
71.0    
71.1    
71.3    
71.5    
71.7    
71.9    
72.1    
72.2    
72.4    
72.6    
72.8    
73.0    
73.2    
73.3    
73.5    
73.7    
73.9    
74.1    
74.3    
74.4    
74.6    
74.8    
75.0    
75.2    
75.4    
75.6    
75.7    
75.9    
76.1    
76.3    
76.5    
76.7    
76.8    
77.0    
77.2    
77.4    
77.6    
77.8    
77.9    
78.1    
78.3    
78.5    
78.7    
78.9    
79.0    
79.2    
79.4    
79.6    
79.8    
80.0    
80.1    
80.3    
80.5    
80.7    
80.9    
81.1    
81.2    
81.4    
81.6    
81.8    
82.0    
82.2    
82.4    
82.5    
82.7    
82.9    
83.1    
83.3    
83.5    
83.6    
83.8    
84.0    
84.2    
84.4    
84.6    
84.7    
84.9    
85.1    
85.3    
85.5    
85.7    
85.8    
86.0    
86.2    
86.4    
86.6    
86.8    
86.9    
87.1    
87.3    
87.5    
87.7    
87.9    
88.1    
88.2    
88.4    
88.6    
88.8    
89.0    
89.2    
89.3    
89.5    
89.7    
89.9    
90.1    
90.3    
90.4    
90.6    
90.8    
91.0    
91.2    
91.4    
91.5    
91.7    
91.9    
92.1    
92.3    
92.5    
92.6    
92.8    
93.0    
93.2    
93.4    
93.6    
93.8    
93.9    
94.1    
94.3    
94.5    
94.7    
94.9    
95.0    
95.2    
95.4    
95.6    
95.8    
96.0    
96.1    
96.3    
96.5    
96.7    
96.9    
97.1    
97.2    
97.4    
97.6    
97.8    
98.0    
98.2    
98.3    
98.5    
98.7    
98.9    
99.1    
99.3    
99.4    
99.6    
99.8    
-found 46 predictions from path traversal
Error with prediction: snap lend_intergenic: 79592, rend_intergenic: 77430  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205511, rend_intergenic: 203897  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 45 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 15039
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 3582 - 15039
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support