-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_534

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.107882_t
Valid prediction for snap_scaffold_534-snap.1-T1
add_exon() Sorry, snap_scaffold_534-snap.1-T1 168-958-terminal-1 is invalid.
Valid prediction for snap_scaffold_534-snap.2-T1
Valid prediction for GeneMark_model.107884_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 4031, 4105
Sorry, prediction snap_scaffold_534-snap.3-T1 fails validation.
(ATG)	 GG	1644-1803	GT	AGG
(TCA)	 AG	4031-4105	GT	GAG
-recovered snap_scaffold_534-snap.3-T1, initial, 1644, 1803
-recovered snap_scaffold_534-snap.3-T1, internal, 4031, 4105
Valid prediction for GeneMark_model.107883_t
Valid prediction for GeneMark_model.107881_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 2793, rend_intergenic: 1932  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 6036
-exon list size: 31


building trellis

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81.8    
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97.0    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 2793, rend_intergenic: 1932  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support