-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_513

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.107835_t
Couldn't classify 2519, 3267
Sorry, prediction snap_scaffold_513-snap.1-T1 fails validation.
(ATG)	 GC	1610-1643	GT	TGG
(TGA)	 AG	1800-1896	GT	GGG
(ATG)	 AG	2519-3267	GT	GAG
-recovered snap_scaffold_513-snap.1-T1, initial, 1610, 1643
add_exon() Sorry, snap_scaffold_513-snap.1-T1 2519-3267-initial-1 is invalid.
-recovered snap_scaffold_513-snap.1-T1, initial, 2519, 3267
-recovered snap_scaffold_513-snap.1-T1, internal, 1800, 1896
-recovered snap_scaffold_513-snap.1-T1, internal, 2519, 3267

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.107836_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 6268
-exon list size: 14


building trellis

6.2    
12.5    
18.8    
25.0    
31.2    
37.5    
43.8    
50.0    
56.2    
62.5    
68.8    
75.0    
81.2    
87.5    
93.8    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support