-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_502

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 4584, 4640
Sorry, prediction snap_scaffold_502-snap.1-T1 fails validation.
(ATG)	 AG	1541-1675	GT	AGG
(GGA)	 AG	4584-4640	GT	GGG
-recovered snap_scaffold_502-snap.1-T1, initial, 1541, 1675
-recovered snap_scaffold_502-snap.1-T1, internal, 1541, 1675
-recovered snap_scaffold_502-snap.1-T1, internal, 4584, 4640

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.107811_t
Valid prediction for GlimmerHMM_glimmerT_61929-T1
add_exon() Sorry, GlimmerHMM_glimmerT_61929-T1 4777-4952-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 6432
-exon list size: 23


building trellis

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28.0    
32.0    
36.0    
40.0    
44.0    
48.0    
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68.0    
72.0    
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80.0    
84.0    
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92.0    
96.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support