-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_5/scaffold_5_8772763-9072333

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g8377.t1
Valid prediction for GlimmerHMM_glimmerT_12625-T1
Valid prediction for snap_scaffold_5-snap.1697-T1
Valid prediction for GlimmerHMM_glimmerT_12624-T1
Valid prediction for GeneMark_model.21409_t
Valid prediction for Augustus_model.g8365.t1
Valid prediction for GeneMark_model.21418_t
Valid prediction for snap_scaffold_5-snap.1690-T1
Valid prediction for snap_scaffold_5-snap.1708-T1
Valid prediction for snap_scaffold_5-snap.1719-T1
Valid prediction for snap_scaffold_5-snap.1696-T1
Valid prediction for GeneMark_model.21416_t
Valid prediction for Augustus_model.g8375.t1
Valid prediction for GeneMark_model.21427_t
Valid prediction for snap_scaffold_5-snap.1720-T1
Valid prediction for GlimmerHMM_glimmerT_12605-T1
Valid prediction for HiQ_model.g8357.t1
Valid prediction for snap_scaffold_5-snap.1707-T1
Valid prediction for snap_scaffold_5-snap.1686-T1
Valid prediction for GlimmerHMM_glimmerT_12629-T1
Valid prediction for GeneMark_model.21441_t
Valid prediction for snap_scaffold_5-snap.1718-T1
Valid prediction for GlimmerHMM_glimmerT_12613-T1
Valid prediction for GlimmerHMM_glimmerT_12621-T1
Valid prediction for GeneMark_model.21419_t
Valid prediction for GeneMark_model.21426_t
Valid prediction for GlimmerHMM_glimmerT_12632-T1
Valid prediction for GeneMark_model.21430_t
Valid prediction for Augustus_model.g8376.t1
Valid prediction for Augustus_model.g8368.t1
Valid prediction for GlimmerHMM_glimmerT_12627-T1
Valid prediction for snap_scaffold_5-snap.1712-T1
Valid prediction for GlimmerHMM_glimmerT_12607-T1
Valid prediction for Augustus_model.g8378.t1
Valid prediction for Augustus_model.g8358.t1
Couldn't classify 246179, 246239
Couldn't classify 249333, 249446
Sorry, prediction pasa_asmbl_44250.p1 fails validation.
(CGA)	 TG	246179-246239	GT	CGG
(GCT)	 AG	246377-246503	GT	ATG
(GTG)	 AG	246697-246839	GT	CGG
(GCA)	 AG	246975-247105	GT	AGG
(GGC)	 AG	247192-247367	GT	AGG
(GGA)	 AG	247485-247608	GT	AGG
(GTG)	 AG	247695-247930	GT	CAG
(AGC)	 AG	248034-248136	GT	AGG
(GAG)	 AG	248261-248418	GT	AGG
(CTT)	 AG	248527-248635	GT	AGG
(GCT)	 AG	248802-248984	GT	AGG
(ATC)	 AG	249145-249249	GT	AGG
(GTG)	 AG	249333-249446	AA	CCA
add_exon() Sorry, pasa_asmbl_44250.p1 248261-248418-terminal-2 is invalid.
-recovered pasa_asmbl_44250.p1, terminal, 248261, 248418
-recovered pasa_asmbl_44250.p1, internal, 246377, 246503
-recovered pasa_asmbl_44250.p1, internal, 246697, 246839
-recovered pasa_asmbl_44250.p1, internal, 246975, 247105
-recovered pasa_asmbl_44250.p1, internal, 247192, 247367
-recovered pasa_asmbl_44250.p1, internal, 247485, 247608
-recovered pasa_asmbl_44250.p1, internal, 247695, 247930
-recovered pasa_asmbl_44250.p1, internal, 248034, 248136
-recovered pasa_asmbl_44250.p1, internal, 248261, 248418
-recovered pasa_asmbl_44250.p1, internal, 248527, 248635
-recovered pasa_asmbl_44250.p1, internal, 248802, 248984
-recovered pasa_asmbl_44250.p1, internal, 249145, 249249
Valid prediction for GlimmerHMM_glimmerT_12601-T1
Couldn't classify 128275, 129372
Sorry, prediction pasa_asmbl_44244.p1 fails validation.
(GGG)	 TG	128275-129372	GA	GAG
Valid prediction for snap_scaffold_5-snap.1698-T1
Valid prediction for Augustus_model.g8379.t1
Valid prediction for GeneMark_model.21432_t
Couldn't classify 239867, 239938
Couldn't classify 240367, 240511
Sorry, prediction pasa_asmbl_45002.p1 fails validation.
(CTG)	 TC	239867-239938	GT	ACG
(ACG)	 AG	240119-240234	GT	AGG
(GTT)	 AG	240367-240511	CA	AGC
-recovered pasa_asmbl_45002.p1, internal, 240119, 240234
Valid prediction for pasa_asmbl_44242.p1
Valid prediction for snap_scaffold_5-snap.1716-T1
Valid prediction for GeneMark_model.21417_t
Valid prediction for snap_scaffold_5-snap.1714-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_5-snap.1713-T1
Couldn't classify 235703, 236098
Sorry, prediction pasa_asmbl_44247.p1 fails validation.
(GTC)	 TA	235703-236098	CA	CAC
Valid prediction for snap_scaffold_5-snap.1706-T1
Couldn't classify 245437, 245564
Couldn't classify 245691, 245859
Sorry, prediction pasa_asmbl_44249.p1 fails validation.
(GGC)	 AA	245437-245564	GT	AGG
(GTT)	 AG	245691-245859	AC	GCA
Valid prediction for GlimmerHMM_glimmerT_12612-T1
Valid prediction for GlimmerHMM_glimmerT_12630-T1
Valid prediction for CodingQuarry_transcript_52035-T1
Valid prediction for snap_scaffold_5-snap.1685-T1
Valid prediction for GlimmerHMM_glimmerT_12622-T1
Valid prediction for GeneMark_model.21439_t
Valid prediction for Augustus_model.g8361.t1
Couldn't classify 254195, 254263
Sorry, prediction pasa_asmbl_44252.p1 fails validation.
(CAA)	 CT	254195-254263	GT	AGG
(TTT)	 AG	254523-254655	GT	CGG
(GTA)	 AG	255084-255279	GT	AGG
(GCT)	 AG	257621-257752	GT	TTG
(CTT)	 AG	258105-258345	GT	TGG
(GTT)	 AG	258475-258606	CA	AAC
-recovered pasa_asmbl_44252.p1, terminal, 258475, 258606
-recovered pasa_asmbl_44252.p1, internal, 254523, 254655
-recovered pasa_asmbl_44252.p1, internal, 255084, 255279
-recovered pasa_asmbl_44252.p1, internal, 257621, 257752
-recovered pasa_asmbl_44252.p1, internal, 258105, 258345
Valid prediction for snap_scaffold_5-snap.1717-T1
Valid prediction for GlimmerHMM_glimmerT_12615-T1
Valid prediction for snap_scaffold_5-snap.1700-T1
Couldn't classify 249907, 249985
Couldn't classify 250784, 250951
Sorry, prediction pasa_asmbl_44251.p1 fails validation.
(CGC)	 CT	249907-249985	GT	TGG
(AGC)	 AG	250094-250242	GT	AGG
(GCT)	 AG	250575-250709	GT	AGG
(GAG)	 AG	250784-250951	GT	AGG
-recovered pasa_asmbl_44251.p1, internal, 250094, 250242
-recovered pasa_asmbl_44251.p1, internal, 250575, 250709
-recovered pasa_asmbl_44251.p1, internal, 250784, 250951
Valid prediction for GeneMark_model.21413_t
Valid prediction for GeneMark_model.21437_t
Valid prediction for snap_scaffold_5-snap.1711-T1
Valid prediction for GlimmerHMM_glimmerT_12619-T1
Valid prediction for Augustus_model.g8373.t1
Valid prediction for GlimmerHMM_glimmerT_12620-T1
Valid prediction for CodingQuarry_transcript_52037-T1
Valid prediction for GeneMark_model.21435_t
Valid prediction for GlimmerHMM_glimmerT_12602-T1
Valid prediction for GlimmerHMM_glimmerT_12628-T1
Valid prediction for snap_scaffold_5-snap.1695-T1
Valid prediction for pasa_asmbl_44234.p1
Valid prediction for HiQ_model.g8366.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_12617-T1
Couldn't classify 219585, 219785
Couldn't classify 221000, 221025
Sorry, prediction pasa_asmbl_45630.p1 fails validation.
(CAA)	 GC	219585-219785	GT	AGG
(ATA)	 AG	220098-220244	GT	GTG
(TGC)	 AG	220418-220547	GT	AAG
(TCG)	 AG	221000-221025	AG	CCA
-recovered pasa_asmbl_45630.p1, internal, 220098, 220244
-recovered pasa_asmbl_45630.p1, internal, 220418, 220547
Valid prediction for Augustus_model.g8380.t1
Couldn't classify 12690, 12729
Couldn't classify 15244, 15362
Sorry, prediction pasa_asmbl_45644.p1 fails validation.
(GCT)	 AC	12690-12729	GT	AGG
(GTA)	 AG	13656-13771	GT	AGG
(AAC)	 AG	13974-14101	GT	AAG
(ATC)	 AG	15000-15100	GT	GAG
(GGG)	 AG	15244-15362	GT	AAG
-recovered pasa_asmbl_45644.p1, internal, 13656, 13771
-recovered pasa_asmbl_45644.p1, internal, 13974, 14101
-recovered pasa_asmbl_45644.p1, internal, 15000, 15100
-recovered pasa_asmbl_45644.p1, internal, 15244, 15362
Valid prediction for pasa_asmbl_45639.p1
Valid prediction for snap_scaffold_5-snap.1699-T1
Valid prediction for Augustus_model.g8370.t1
Valid prediction for GlimmerHMM_glimmerT_12606-T1
Couldn't classify 212237, 212356
Sorry, prediction pasa_asmbl_45634.p1 fails validation.
(ATG)	 AC	211215-211330	GT	GGG
(GGA)	 AG	211516-211559	GT	AGG
(GCT)	 AG	211715-211896	GT	TGG
(AGT)	 AG	212237-212356	CC	GAC
-recovered pasa_asmbl_45634.p1, initial, 211215, 211330
-recovered pasa_asmbl_45634.p1, internal, 211516, 211559
-recovered pasa_asmbl_45634.p1, internal, 211715, 211896
Valid prediction for GlimmerHMM_glimmerT_12633-T1
Couldn't classify 219126, 219386
Sorry, prediction pasa_asmbl_45631.p1 fails validation.
(ATG)	 AC	217767-217785	GT	AGG
(TTT)	 AG	218535-218680	GT	AGG
(GAT)	 AG	219126-219386	CG	GCC
-recovered pasa_asmbl_45631.p1, initial, 217767, 217785
-recovered pasa_asmbl_45631.p1, internal, 218535, 218680
Valid prediction for GeneMark_model.21431_t
Valid prediction for snap_scaffold_5-snap.1693-T1
Valid prediction for GeneMark_model.21410_t
Couldn't classify 160649, 160741
Sorry, prediction pasa_asmbl_45637.p1 fails validation.
(CAA)	 CC	160649-160741	GT	AGG
(GTG)	 AG	160837-160983	GT	CTG
(TTG)	 AG	161070-161181	GT	GGG
(AAA)	 AG	161508-161695	GT	AGG
(GTT)	 AG	161777-161887	TG	GAT
-recovered pasa_asmbl_45637.p1, terminal, 161777, 161887
-recovered pasa_asmbl_45637.p1, internal, 160837, 160983
-recovered pasa_asmbl_45637.p1, internal, 161070, 161181
-recovered pasa_asmbl_45637.p1, internal, 161508, 161695
Valid prediction for GeneMark_model.21424_t
Valid prediction for CodingQuarry_transcript_52036-T1
Valid prediction for GlimmerHMM_glimmerT_12600-T1
Valid prediction for snap_scaffold_5-snap.1709-T1
Valid prediction for snap_scaffold_5-snap.1705-T1
Valid prediction for snap_scaffold_5-snap.1691-T1
Valid prediction for GlimmerHMM_glimmerT_12623-T1
Valid prediction for GlimmerHMM_glimmerT_12609-T1
Valid prediction for pasa_asmbl_45624.p1
Valid prediction for GeneMark_model.21434_t
Valid prediction for GlimmerHMM_glimmerT_12634-T1
Valid prediction for GlimmerHMM_glimmerT_12614-T1
Valid prediction for snap_scaffold_5-snap.1722-T1
Valid prediction for GeneMark_model.21440_t
Valid prediction for snap_scaffold_5-snap.1725-T1
Valid prediction for GlimmerHMM_glimmerT_12604-T1
Valid prediction for GeneMark_model.21412_t
Valid prediction for GeneMark_model.21445_t
Valid prediction for snap_scaffold_5-snap.1727-T1
Valid prediction for GlimmerHMM_glimmerT_12616-T1
Valid prediction for snap_scaffold_5-snap.1694-T1
Couldn't classify 212631, 212731
Sorry, prediction pasa_asmbl_45633.p1 fails validation.
(GTA)	 CA	212631-212731	GT	TGG
(GGA)	 AG	212851-212951	GT	ATG
(ATG)	 AG	213031-213107	GT	ATG
(GGC)	 AG	213219-213282	GT	CGG
(TTT)	 AG	213389-213474	GT	AGG
(GAG)	 AG	213604-213714	GT	AGG
(GGT)	 AG	213809-213910	TT	GAT
add_exon() Sorry, pasa_asmbl_45633.p1 213031-213107-initial-1 is invalid.
-recovered pasa_asmbl_45633.p1, initial, 213031, 213107
-recovered pasa_asmbl_45633.p1, terminal, 213809, 213910
-recovered pasa_asmbl_45633.p1, internal, 212851, 212951
-recovered pasa_asmbl_45633.p1, internal, 213031, 213107
-recovered pasa_asmbl_45633.p1, internal, 213219, 213282
-recovered pasa_asmbl_45633.p1, internal, 213389, 213474
-recovered pasa_asmbl_45633.p1, internal, 213604, 213714
Valid prediction for snap_scaffold_5-snap.1688-T1
Valid prediction for GeneMark_model.21422_t
Valid prediction for GeneMark_model.21433_t
Valid prediction for GlimmerHMM_glimmerT_12610-T1
Couldn't classify 36941, 37177
Sorry, prediction pasa_asmbl_45641.p1 fails validation.
(ATG)	 AA	34724-34918	GT	AGG
(GTG)	 AG	36152-36295	GT	AGG
(GTG)	 AG	36672-36791	GT	GGG
(ACT)	 AG	36941-37177	CG	TAC
-recovered pasa_asmbl_45641.p1, initial, 34724, 34918
-recovered pasa_asmbl_45641.p1, internal, 36152, 36295
-recovered pasa_asmbl_45641.p1, internal, 36672, 36791
Valid prediction for pasa_asmbl_45635.p1
Valid prediction for snap_scaffold_5-snap.1710-T1
Couldn't classify 266671, 266767
Sorry, prediction pasa_asmbl_45628.p1 fails validation.
(AGG)	 AA	266671-266767	GT	GAG
(GGG)	 AG	266921-266990	GT	GGG
(GTC)	 AG	267086-267230	GT	CGG
(TGT)	 AG	267415-267637	GT	AGG
(ATC)	 AG	267810-267898	GT	GGG
(GTC)	 AG	267985-268026	GT	GGG
(CAA)	 AG	268146-268303	GT	AGG
(GCG)	 AG	268406-268473	GT	AGG
(TTG)	 AG	268597-268724	GT	TGG
(CTG)	 AG	268872-269285	AT	AAA
-recovered pasa_asmbl_45628.p1, terminal, 268872, 269285
-recovered pasa_asmbl_45628.p1, internal, 266921, 266990
-recovered pasa_asmbl_45628.p1, internal, 267086, 267230
-recovered pasa_asmbl_45628.p1, internal, 267415, 267637
-recovered pasa_asmbl_45628.p1, internal, 267810, 267898
-recovered pasa_asmbl_45628.p1, internal, 267985, 268026
-recovered pasa_asmbl_45628.p1, internal, 268146, 268303
-recovered pasa_asmbl_45628.p1, internal, 268406, 268473
-recovered pasa_asmbl_45628.p1, internal, 268597, 268724
Valid prediction for Augustus_model.g8372.t1
Valid prediction for Augustus_model.g8360.t1
Valid prediction for Augustus_model.g8363.t1
Valid prediction for Augustus_model.g8369.t1
Valid prediction for GeneMark_model.21429_t
Valid prediction for snap_scaffold_5-snap.1704-T1
Valid prediction for GlimmerHMM_glimmerT_12618-T1
Valid prediction for snap_scaffold_5-snap.1721-T1
Valid prediction for snap_scaffold_5-snap.1684-T1
Valid prediction for GlimmerHMM_glimmerT_12626-T1
Valid prediction for snap_scaffold_5-snap.1726-T1
Valid prediction for GeneMark_model.21442_t
Valid prediction for snap_scaffold_5-snap.1724-T1
Valid prediction for snap_scaffold_5-snap.1715-T1
Valid prediction for GeneMark_model.21414_t
Valid prediction for GeneMark_model.21415_t
Valid prediction for GeneMark_model.21438_t
Valid prediction for GeneMark_model.21428_t
Valid prediction for snap_scaffold_5-snap.1689-T1
Couldn't classify 184931, 186226
Sorry, prediction pasa_asmbl_45636.p1 fails validation.
(CCT)	 CC	184931-186226	AA	AGA
Valid prediction for GeneMark_model.21443_t
Valid prediction for HiQ_model.g8362.t1
Valid prediction for GeneMark_model.21444_t
Valid prediction for Augustus_model.g8382.t1
Valid prediction for GeneMark_model.21408_t
Valid prediction for GeneMark_model.21411_t
Valid prediction for Augustus_model.g8359.t1
Couldn't classify 20429, 20444
Couldn't classify 20838, 21082
Sorry, prediction pasa_asmbl_45643.p1 fails validation.
(TCT)	 TC	20429-20444	GC	AGG
(GTC)	 AG	20599-20721	GT	AGG
(GTA)	 AG	20838-21082	AA	CCA
-recovered pasa_asmbl_45643.p1, internal, 20599, 20721
Valid prediction for snap_scaffold_5-snap.1701-T1
Valid prediction for Augustus_model.g8381.t1
Valid prediction for HiQ_model.g8356.t1
Valid prediction for GlimmerHMM_glimmerT_12603-T1
Valid prediction for GeneMark_model.21420_t
Valid prediction for HiQ_model.g8371.t1
Valid prediction for GlimmerHMM_glimmerT_12611-T1
Valid prediction for snap_scaffold_5-snap.1687-T1
Valid prediction for snap_scaffold_5-snap.1703-T1
Valid prediction for Augustus_model.g8374.t1
Valid prediction for HiQ_model.g8364.t1
Valid prediction for snap_scaffold_5-snap.1692-T1
Valid prediction for GeneMark_model.21425_t
Valid prediction for CodingQuarry_transcript_52034-T1
Valid prediction for GeneMark_model.21423_t
Valid prediction for snap_scaffold_5-snap.1702-T1
Valid prediction for GlimmerHMM_glimmerT_12631-T1
Valid prediction for GeneMark_model.21436_t
Valid prediction for snap_scaffold_5-snap.1723-T1
Valid prediction for Augustus_model.g8367.t1
Valid prediction for GlimmerHMM_glimmerT_12608-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 258606, rend_intergenic: 255267  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 299571
-exon list size: 725


building trellis

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36.9    
37.0    
37.1    
37.3    
37.4    
37.6    
37.7    
37.8    
38.0    
38.1    
38.2    
38.4    
38.5    
38.7    
38.8    
38.9    
39.1    
39.2    
39.3    
39.5    
39.6    
39.8    
39.9    
40.0    
40.2    
40.3    
40.4    
40.6    
40.7    
40.9    
41.0    
41.1    
41.3    
41.4    
41.5    
41.7    
41.8    
42.0    
42.1    
42.2    
42.4    
42.5    
42.6    
42.8    
42.9    
43.1    
43.2    
43.3    
43.5    
43.6    
43.7    
43.9    
44.0    
44.2    
44.3    
44.4    
44.6    
44.7    
44.8    
45.0    
45.1    
45.3    
45.4    
45.5    
45.7    
45.8    
45.9    
46.1    
46.2    
46.4    
46.5    
46.6    
46.8    
46.9    
47.0    
47.2    
47.3    
47.5    
47.6    
47.7    
47.9    
48.0    
48.1    
48.3    
48.4    
48.6    
48.7    
48.8    
49.0    
49.1    
49.2    
49.4    
49.5    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.5    
50.6    
50.8    
50.9    
51.0    
51.2    
51.3    
51.4    
51.6    
51.7    
51.9    
52.0    
52.1    
52.3    
52.4    
52.5    
52.7    
52.8    
53.0    
53.1    
53.2    
53.4    
53.5    
53.6    
53.8    
53.9    
54.1    
54.2    
54.3    
54.5    
54.6    
54.7    
54.9    
55.0    
55.2    
55.3    
55.4    
55.6    
55.7    
55.8    
56.0    
56.1    
56.3    
56.4    
56.5    
56.7    
56.8    
56.9    
57.1    
57.2    
57.4    
57.5    
57.6    
57.8    
57.9    
58.0    
58.2    
58.3    
58.5    
58.6    
58.7    
58.9    
59.0    
59.1    
59.3    
59.4    
59.6    
59.7    
59.8    
60.0    
60.1    
60.2    
60.4    
60.5    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.5    
61.6    
61.8    
61.9    
62.0    
62.2    
62.3    
62.4    
62.6    
62.7    
62.9    
63.0    
63.1    
63.3    
63.4    
63.5    
63.7    
63.8    
64.0    
64.1    
64.2    
64.4    
64.5    
64.6    
64.8    
64.9    
65.1    
65.2    
65.3    
65.5    
65.6    
65.7    
65.9    
66.0    
66.2    
66.3    
66.4    
66.6    
66.7    
66.9    
67.0    
67.1    
67.3    
67.4    
67.5    
67.7    
67.8    
68.0    
68.1    
68.2    
68.4    
68.5    
68.6    
68.8    
68.9    
69.1    
69.2    
69.3    
69.5    
69.6    
69.7    
69.9    
70.0    
70.2    
70.3    
70.4    
70.6    
70.7    
70.8    
71.0    
71.1    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.1    
72.2    
72.4    
72.5    
72.6    
72.8    
72.9    
73.0    
73.2    
73.3    
73.5    
73.6    
73.7    
73.9    
74.0    
74.1    
74.3    
74.4    
74.6    
74.7    
74.8    
75.0    
75.1    
75.2    
75.4    
75.5    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.5    
76.6    
76.8    
76.9    
77.0    
77.2    
77.3    
77.4    
77.6    
77.7    
77.9    
78.0    
78.1    
78.3    
78.4    
78.5    
78.7    
78.8    
79.0    
79.1    
79.2    
79.4    
79.5    
79.6    
79.8    
79.9    
80.1    
80.2    
80.3    
80.5    
80.6    
80.7    
80.9    
81.0    
81.2    
81.3    
81.4    
81.6    
81.7    
81.8    
82.0    
82.1    
82.3    
82.4    
82.5    
82.7    
82.8    
82.9    
83.1    
83.2    
83.4    
83.5    
83.6    
83.8    
83.9    
84.0    
84.2    
84.3    
84.5    
84.6    
84.7    
84.9    
85.0    
85.1    
85.3    
85.4    
85.6    
85.7    
85.8    
86.0    
86.1    
86.2    
86.4    
86.5    
86.7    
86.8    
86.9    
87.1    
87.2    
87.3    
87.5    
87.6    
87.8    
87.9    
88.0    
88.2    
88.3    
88.4    
88.6    
88.7    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.7    
89.8    
90.0    
90.1    
90.2    
90.4    
90.5    
90.6    
90.8    
90.9    
91.1    
91.2    
91.3    
91.5    
91.6    
91.7    
91.9    
92.0    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
93.0    
93.1    
93.3    
93.4    
93.5    
93.7    
93.8    
93.9    
94.1    
94.2    
94.4    
94.5    
94.6    
94.8    
94.9    
95.0    
95.2    
95.3    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.3    
96.4    
96.6    
96.7    
96.8    
97.0    
97.1    
97.2    
97.4    
97.5    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.5    
98.6    
98.8    
98.9    
99.0    
99.2    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 33 predictions from path traversal
Error with prediction: snap lend_intergenic: 258606, rend_intergenic: 255267  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 32 predictions persist after filtering for low support