-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_5/scaffold_5_6588905-6802894

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for pasa_asmbl_44106.p1
Valid prediction for snap_scaffold_5-snap.1338-T1
Valid prediction for snap_scaffold_5-snap.1360-T1
Valid prediction for snap_scaffold_5-snap.1362-T1
Valid prediction for GeneMark_model.21029_t
Valid prediction for GeneMark_model.21034_t
Valid prediction for GeneMark_model.21010_t
Valid prediction for GeneMark_model.21020_t
Valid prediction for GeneMark_model.21036_t
Valid prediction for snap_scaffold_5-snap.1357-T1
Valid prediction for GlimmerHMM_glimmerT_12366-T1
Couldn't classify 131904, 132063
Sorry, prediction pasa_asmbl_44109.p1 fails validation.
(GTC)	 GT	131904-132063	GT	CGG
(AGA)	 AG	132617-132750	GT	AGG
(GAT)	 AG	132840-132965	GT	TGG
(TCT)	 AG	133522-133578	GT	AGG
(GGG)	 AG	133718-133832	GT	AGG
(TGT)	 AG	134469-134563	GT	TGG
(GAT)	 AG	134828-134890	GT	AGG
(CTC)	 AG	135308-135431	GT	TGG
(GTC)	 AG	136248-136368	GT	TGG
(GGG)	 AG	136524-136621	GT	TGG
(GGA)	 AG	136770-136875	GT	AGG
(ACT)	 AG	136972-137014	GT	AGG
(TTT)	 AG	137120-137210	GT	TAG
(GTA)	 AG	137534-137611	GT	TGG
(TGA)	 AG	139265-139302	GA	GAG
-recovered pasa_asmbl_44109.p1, terminal, 139265, 139302
-recovered pasa_asmbl_44109.p1, internal, 132617, 132750
-recovered pasa_asmbl_44109.p1, internal, 132840, 132965
-recovered pasa_asmbl_44109.p1, internal, 133522, 133578
-recovered pasa_asmbl_44109.p1, internal, 133718, 133832
-recovered pasa_asmbl_44109.p1, internal, 134469, 134563
-recovered pasa_asmbl_44109.p1, internal, 134828, 134890
-recovered pasa_asmbl_44109.p1, internal, 135308, 135431
-recovered pasa_asmbl_44109.p1, internal, 136248, 136368
-recovered pasa_asmbl_44109.p1, internal, 136524, 136621
-recovered pasa_asmbl_44109.p1, internal, 136770, 136875
-recovered pasa_asmbl_44109.p1, internal, 136972, 137014
-recovered pasa_asmbl_44109.p1, internal, 137120, 137210
-recovered pasa_asmbl_44109.p1, internal, 137534, 137611
Valid prediction for GeneMark_model.21005_t
Valid prediction for GeneMark_model.20998_t
Valid prediction for GeneMark_model.21001_t
Valid prediction for CodingQuarry_transcript_51977-T1
Valid prediction for GeneMark_model.21003_t
Valid prediction for snap_scaffold_5-snap.1346-T1
Valid prediction for snap_scaffold_5-snap.1341-T1
Valid prediction for snap_scaffold_5-snap.1355-T1
Valid prediction for snap_scaffold_5-snap.1361-T1
Valid prediction for snap_scaffold_5-snap.1351-T1
Valid prediction for HiQ_model.g8188.t1
Valid prediction for snap_scaffold_5-snap.1329-T1
Valid prediction for GeneMark_model.21018_t
Valid prediction for CodingQuarry_transcript_51974-T1
Valid prediction for pasa_asmbl_44103.p1
Valid prediction for GeneMark_model.21041_t
Valid prediction for snap_scaffold_5-snap.1333-T1
Valid prediction for GlimmerHMM_glimmerT_12373-T1
Valid prediction for GeneMark_model.21013_t
Couldn't classify 143978, 144064
Sorry, prediction pasa_asmbl_44111.p1 fails validation.
(GTT)	 CT	143978-144064	GT	AGG
(ATA)	 AG	144272-144362	GT	CGG
(CTA)	 AG	144478-144569	GT	AGG
(ATA)	 AG	144870-145037	GT	AGG
(GCG)	 AG	145191-145316	GG	GAG
-recovered pasa_asmbl_44111.p1, terminal, 145191, 145316
-recovered pasa_asmbl_44111.p1, internal, 144272, 144362
-recovered pasa_asmbl_44111.p1, internal, 144478, 144569
-recovered pasa_asmbl_44111.p1, internal, 144870, 145037
Valid prediction for GeneMark_model.21022_t
Valid prediction for GlimmerHMM_glimmerT_12358-T1
Valid prediction for GeneMark_model.21038_t
Valid prediction for snap_scaffold_5-snap.1342-T1
Valid prediction for GeneMark_model.21009_t
Valid prediction for HiQ_model.g8181.t1
Valid prediction for snap_scaffold_5-snap.1349-T1
Valid prediction for GlimmerHMM_glimmerT_12363-T1
Valid prediction for GeneMark_model.21025_t
Valid prediction for GlimmerHMM_glimmerT_12375-T1
Valid prediction for snap_scaffold_5-snap.1336-T1
Valid prediction for GeneMark_model.21007_t
Valid prediction for GlimmerHMM_glimmerT_12370-T1
Valid prediction for HiQ_model.g8189.t1
Valid prediction for CodingQuarry_transcript_51976-T1
Valid prediction for GeneMark_model.21039_t
Valid prediction for CodingQuarry_transcript_51973-T1
Valid prediction for GeneMark_model.20997_t
Valid prediction for GlimmerHMM_glimmerT_12357-T1
Valid prediction for HiQ_model.g8186.t1
Valid prediction for snap_scaffold_5-snap.1365-T1
Valid prediction for GeneMark_model.21011_t
Valid prediction for GeneMark_model.21027_t
Valid prediction for GeneMark_model.21031_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.21023_t
Valid prediction for GeneMark_model.20996_t
Valid prediction for Augustus_model.g8173.t1
Valid prediction for Augustus_model.g8185.t1
Valid prediction for snap_scaffold_5-snap.1358-T1
Valid prediction for snap_scaffold_5-snap.1343-T1
Valid prediction for GlimmerHMM_glimmerT_12364-T1
Valid prediction for snap_scaffold_5-snap.1339-T1
Valid prediction for GeneMark_model.21028_t
Valid prediction for GeneMark_model.21021_t
Valid prediction for pasa_asmbl_45521.p1
Valid prediction for GlimmerHMM_glimmerT_12377-T1
Valid prediction for GeneMark_model.21030_t
Valid prediction for GlimmerHMM_glimmerT_12362-T1
Valid prediction for Augustus_model.g8177.t1
Valid prediction for GeneMark_model.21040_t
Valid prediction for snap_scaffold_5-snap.1350-T1
Valid prediction for GlimmerHMM_glimmerT_12371-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for HiQ_model.g8180.t1
Valid prediction for GlimmerHMM_glimmerT_12374-T1
Couldn't classify 194681, 194866
Sorry, prediction pasa_asmbl_45502.p1 fails validation.
(ATG)	 AC	192826-192886	GT	AGG
(TGA)	 AG	193593-193775	GT	AGG
(TGA)	 AG	194399-194550	GT	AGG
(GTG)	 AG	194681-194866	GA	CTG
-recovered pasa_asmbl_45502.p1, initial, 192826, 192886
-recovered pasa_asmbl_45502.p1, internal, 193593, 193775
-recovered pasa_asmbl_45502.p1, internal, 194399, 194550
Couldn't classify 207083, 207385
Sorry, prediction pasa_asmbl_45496.p1 fails validation.
(ATG)	 GG	207083-207385	GA	GTG
Valid prediction for GlimmerHMM_glimmerT_12376-T1
Valid prediction for GeneMark_model.21019_t
Valid prediction for snap_scaffold_5-snap.1328-T1
Valid prediction for Augustus_model.g8183.t1
Valid prediction for snap_scaffold_5-snap.1337-T1
Valid prediction for GeneMark_model.21026_t
Valid prediction for GeneMark_model.21042_t
Valid prediction for GlimmerHMM_glimmerT_12378-T1
Valid prediction for GlimmerHMM_glimmerT_12360-T1
Valid prediction for HiQ_model.g8175.t1
Valid prediction for GlimmerHMM_glimmerT_12365-T1
Valid prediction for HiQ_model.g8174.t1
Valid prediction for GeneMark_model.21002_t
Valid prediction for HiQ_model.g8192.t1
Couldn't classify 195018, 195605
Sorry, prediction pasa_asmbl_45500.p1 fails validation.
(GGA)	 CG	195018-195605	AC	GAA
Couldn't classify 89925, 90070
Sorry, prediction pasa_asmbl_45518.p1 fails validation.
(GAG)	 GT	89925-90070	GT	AAG
(CAT)	 AG	92006-92174	GT	AGG
(CGT)	 AG	92364-92481	GT	AGG
(GGC)	 AG	92899-93092	GT	AGG
(ATA)	 AG	93275-93406	GT	AGG
(GAG)	 AG	93714-93893	CA	GAC
-recovered pasa_asmbl_45518.p1, terminal, 93714, 93893
-recovered pasa_asmbl_45518.p1, internal, 92006, 92174
-recovered pasa_asmbl_45518.p1, internal, 92364, 92481
-recovered pasa_asmbl_45518.p1, internal, 92899, 93092
-recovered pasa_asmbl_45518.p1, internal, 93275, 93406
Valid prediction for snap_scaffold_5-snap.1348-T1
Valid prediction for GeneMark_model.21016_t
Valid prediction for snap_scaffold_5-snap.1354-T1
Valid prediction for GlimmerHMM_glimmerT_12361-T1
Valid prediction for GlimmerHMM_glimmerT_12369-T1
Valid prediction for GeneMark_model.21012_t
Valid prediction for GeneMark_model.21004_t
Valid prediction for Augustus_model.g8184.t1
Couldn't classify 175357, 175449
Sorry, prediction pasa_asmbl_45508.p1 fails validation.
(ATG)	 CC	173050-173607	GT	AGG
(CAG)	 AG	175357-175449	GG	TCG
-recovered pasa_asmbl_45508.p1, initial, 173050, 173607
Valid prediction for snap_scaffold_5-snap.1356-T1
Valid prediction for GeneMark_model.21015_t
Valid prediction for GeneMark_model.21008_t
Valid prediction for snap_scaffold_5-snap.1359-T1
Valid prediction for GeneMark_model.21024_t
Valid prediction for CodingQuarry_transcript_51978-T1
Couldn't classify 52243, 52362
Couldn't classify 52917, 52986
Sorry, prediction pasa_asmbl_45527.p1 fails validation.
(CAC)	 GG	52243-52362	GT	AGG
(GGA)	 AG	52477-52637	GT	AGG
(CCT)	 AG	52917-52986	AG	ACA
-recovered pasa_asmbl_45527.p1, internal, 52477, 52637
Valid prediction for GeneMark_model.21014_t
Valid prediction for Augustus_model.g8179.t1
Couldn't classify 151088, 151348
Couldn't classify 151987, 152066
Sorry, prediction pasa_asmbl_46365.p1 fails validation.
(GTC)	 AG	151088-151348	GT	ATG
(GTT)	 AG	151547-151682	GT	AGG
(AGA)	 AG	151987-152066	GT	AGG
-recovered pasa_asmbl_46365.p1, internal, 151088, 151348
-recovered pasa_asmbl_46365.p1, internal, 151547, 151682
-recovered pasa_asmbl_46365.p1, internal, 151987, 152066
Valid prediction for snap_scaffold_5-snap.1364-T1
Valid prediction for snap_scaffold_5-snap.1332-T1
Valid prediction for snap_scaffold_5-snap.1345-T1
Valid prediction for GeneMark_model.20999_t
Valid prediction for Augustus_model.g8191.t1
Valid prediction for GeneMark_model.21035_t
Valid prediction for snap_scaffold_5-snap.1363-T1
Valid prediction for GeneMark_model.21033_t
Valid prediction for snap_scaffold_5-snap.1334-T1
Valid prediction for snap_scaffold_5-snap.1353-T1
Valid prediction for CodingQuarry_transcript_51972-T1
Valid prediction for GeneMark_model.21032_t
Valid prediction for CodingQuarry_transcript_51979-T1
Valid prediction for CodingQuarry_transcript_51969-T1
Valid prediction for GeneMark_model.21000_t
Valid prediction for snap_scaffold_5-snap.1344-T1
Valid prediction for GlimmerHMM_glimmerT_12359-T1
Valid prediction for pasa_asmbl_45528.p1
Valid prediction for Augustus_model.g8187.t1
Valid prediction for GeneMark_model.21017_t
Valid prediction for snap_scaffold_5-snap.1331-T1
Valid prediction for snap_scaffold_5-snap.1352-T1
Valid prediction for CodingQuarry_transcript_51970-T1
Valid prediction for CodingQuarry_transcript_51975-T1
Valid prediction for Augustus_model.g8172.t1
Valid prediction for HiQ_model.g8190.t1
Valid prediction for snap_scaffold_5-snap.1330-T1
Valid prediction for GlimmerHMM_glimmerT_12356-T1
Valid prediction for Augustus_model.g8178.t1
Valid prediction for Augustus_model.g8176.t1
Valid prediction for GlimmerHMM_glimmerT_12368-T1
Valid prediction for pasa_asmbl_46390.p1
Valid prediction for GlimmerHMM_glimmerT_12372-T1
Couldn't classify 133437, 133622
Sorry, prediction pasa_asmbl_45514.p1 fails validation.
(GTG)	 AC	133437-133622	GT	AGG
(ACA)	 AG	133746-133904	GT	AGG
(GAA)	 AG	134139-134363	GT	AGG
(CAT)	 AG	134469-134552	GT	ATG
(ATG)	 AG	134735-134829	GT	GTG
(GTA)	 AG	134910-135116	GT	GCG
(ACG)	 AG	135265-135374	GT	CGG
(AAG)	 AG	135594-136262	GT	CTG
(CCC)	 AG	136366-136436	GT	AGG
(AAA)	 AG	136544-136656	GT	TGG
(GTA)	 AG	136896-137045	GT	AGG
(ACA)	 AG	137227-137342	GT	TTG
(ACA)	 AG	137437-137525	GT	TGG
(ACC)	 AG	137775-137951	AG	GAA
-recovered pasa_asmbl_45514.p1, initial, 134735, 134829
-recovered pasa_asmbl_45514.p1, terminal, 137775, 137951
-recovered pasa_asmbl_45514.p1, internal, 133746, 133904
-recovered pasa_asmbl_45514.p1, internal, 134139, 134363
-recovered pasa_asmbl_45514.p1, internal, 134469, 134552
-recovered pasa_asmbl_45514.p1, internal, 134735, 134829
-recovered pasa_asmbl_45514.p1, internal, 134910, 135116
-recovered pasa_asmbl_45514.p1, internal, 135265, 135374
-recovered pasa_asmbl_45514.p1, internal, 135594, 136262
-recovered pasa_asmbl_45514.p1, internal, 136366, 136436
-recovered pasa_asmbl_45514.p1, internal, 136544, 136656
-recovered pasa_asmbl_45514.p1, internal, 136896, 137045
-recovered pasa_asmbl_45514.p1, internal, 137227, 137342
-recovered pasa_asmbl_45514.p1, internal, 137437, 137525
Valid prediction for snap_scaffold_5-snap.1347-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for Augustus_model.g8182.t1
Valid prediction for GeneMark_model.21037_t
Valid prediction for GlimmerHMM_glimmerT_12367-T1
Valid prediction for snap_scaffold_5-snap.1340-T1
Couldn't classify 182556, 182621
Sorry, prediction pasa_asmbl_45506.p1 fails validation.
(GCT)	 CA	182556-182621	GT	TGG
(ATG)	 AG	182761-182917	GT	AGG
(AAC)	 AG	183033-183181	GT	GGG
(CAG)	 AG	184868-185056	GT	AGG
(CCT)	 AG	185194-185407	GT	AGG
(GTC)	 AG	185522-185602	GT	TGG
(GCC)	 AG	186740-186861	TA	GAT
-recovered pasa_asmbl_45506.p1, initial, 182761, 182917
-recovered pasa_asmbl_45506.p1, terminal, 186740, 186861
-recovered pasa_asmbl_45506.p1, internal, 182761, 182917
-recovered pasa_asmbl_45506.p1, internal, 183033, 183181
-recovered pasa_asmbl_45506.p1, internal, 184868, 185056
-recovered pasa_asmbl_45506.p1, internal, 185194, 185407
-recovered pasa_asmbl_45506.p1, internal, 185522, 185602
Valid prediction for pasa_asmbl_45503.p1
Valid prediction for snap_scaffold_5-snap.1335-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 29720, rend_intergenic: 27161  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30882, rend_intergenic: 30272  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40941, rend_intergenic: 35140  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46358, rend_intergenic: 44212  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51146, rend_intergenic: 47365  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80396, rend_intergenic: 76040  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101753, rend_intergenic: 96265  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119212, rend_intergenic: 118512  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138246, rend_intergenic: 133365  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149932, rend_intergenic: 149196  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151241, rend_intergenic: 150121  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 185404, rend_intergenic: 163283  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 194465, rend_intergenic: 190869  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 209260, rend_intergenic: 201436  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 213990
-exon list size: 682


building trellis

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44.7    
44.9    
45.0    
45.2    
45.3    
45.5    
45.6    
45.8    
45.9    
46.1    
46.2    
46.3    
46.5    
46.6    
46.8    
46.9    
47.1    
47.2    
47.4    
47.5    
47.7    
47.8    
48.0    
48.1    
48.2    
48.4    
48.5    
48.7    
48.8    
49.0    
49.1    
49.3    
49.4    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.6    
50.7    
50.9    
51.0    
51.2    
51.3    
51.5    
51.6    
51.8    
51.9    
52.0    
52.2    
52.3    
52.5    
52.6    
52.8    
52.9    
53.1    
53.2    
53.4    
53.5    
53.7    
53.8    
53.9    
54.1    
54.2    
54.4    
54.5    
54.7    
54.8    
55.0    
55.1    
55.3    
55.4    
55.6    
55.7    
55.8    
56.0    
56.1    
56.3    
56.4    
56.6    
56.7    
56.9    
57.0    
57.2    
57.3    
57.5    
57.6    
57.7    
57.9    
58.0    
58.2    
58.3    
58.5    
58.6    
58.8    
58.9    
59.1    
59.2    
59.4    
59.5    
59.6    
59.8    
59.9    
60.1    
60.2    
60.4    
60.5    
60.7    
60.8    
61.0    
61.1    
61.3    
61.4    
61.5    
61.7    
61.8    
62.0    
62.1    
62.3    
62.4    
62.6    
62.7    
62.9    
63.0    
63.2    
63.3    
63.5    
63.6    
63.7    
63.9    
64.0    
64.2    
64.3    
64.5    
64.6    
64.8    
64.9    
65.1    
65.2    
65.4    
65.5    
65.6    
65.8    
65.9    
66.1    
66.2    
66.4    
66.5    
66.7    
66.8    
67.0    
67.1    
67.3    
67.4    
67.5    
67.7    
67.8    
68.0    
68.1    
68.3    
68.4    
68.6    
68.7    
68.9    
69.0    
69.2    
69.3    
69.4    
69.6    
69.7    
69.9    
70.0    
70.2    
70.3    
70.5    
70.6    
70.8    
70.9    
71.1    
71.2    
71.3    
71.5    
71.6    
71.8    
71.9    
72.1    
72.2    
72.4    
72.5    
72.7    
72.8    
73.0    
73.1    
73.2    
73.4    
73.5    
73.7    
73.8    
74.0    
74.1    
74.3    
74.4    
74.6    
74.7    
74.9    
75.0    
75.1    
75.3    
75.4    
75.6    
75.7    
75.9    
76.0    
76.2    
76.3    
76.5    
76.6    
76.8    
76.9    
77.0    
77.2    
77.3    
77.5    
77.6    
77.8    
77.9    
78.1    
78.2    
78.4    
78.5    
78.7    
78.8    
78.9    
79.1    
79.2    
79.4    
79.5    
79.7    
79.8    
80.0    
80.1    
80.3    
80.4    
80.6    
80.7    
80.8    
81.0    
81.1    
81.3    
81.4    
81.6    
81.7    
81.9    
82.0    
82.2    
82.3    
82.5    
82.6    
82.7    
82.9    
83.0    
83.2    
83.3    
83.5    
83.6    
83.8    
83.9    
84.1    
84.2    
84.4    
84.5    
84.6    
84.8    
84.9    
85.1    
85.2    
85.4    
85.5    
85.7    
85.8    
86.0    
86.1    
86.3    
86.4    
86.5    
86.7    
86.8    
87.0    
87.1    
87.3    
87.4    
87.6    
87.7    
87.9    
88.0    
88.2    
88.3    
88.5    
88.6    
88.7    
88.9    
89.0    
89.2    
89.3    
89.5    
89.6    
89.8    
89.9    
90.1    
90.2    
90.4    
90.5    
90.6    
90.8    
90.9    
91.1    
91.2    
91.4    
91.5    
91.7    
91.8    
92.0    
92.1    
92.3    
92.4    
92.5    
92.7    
92.8    
93.0    
93.1    
93.3    
93.4    
93.6    
93.7    
93.9    
94.0    
94.2    
94.3    
94.4    
94.6    
94.7    
94.9    
95.0    
95.2    
95.3    
95.5    
95.6    
95.8    
95.9    
96.1    
96.2    
96.3    
96.5    
96.6    
96.8    
96.9    
97.1    
97.2    
97.4    
97.5    
97.7    
97.8    
98.0    
98.1    
98.2    
98.4    
98.5    
98.7    
98.8    
99.0    
99.1    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 32 predictions from path traversal
Error with prediction: snap lend_intergenic: 29720, rend_intergenic: 27161  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30882, rend_intergenic: 30272  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40941, rend_intergenic: 35140  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46358, rend_intergenic: 44212  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51146, rend_intergenic: 47365  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80396, rend_intergenic: 76040  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101753, rend_intergenic: 96265  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119212, rend_intergenic: 118512  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138246, rend_intergenic: 133365  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149932, rend_intergenic: 149196  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151241, rend_intergenic: 150121  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 185404, rend_intergenic: 163283  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 194465, rend_intergenic: 190869  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 209260, rend_intergenic: 201436  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 23 predictions persist after filtering for low support