-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_5/scaffold_5_6358764-6599831 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_5-snap.1296-T1 Valid prediction for snap_scaffold_5-snap.1315-T1 Valid prediction for GeneMark_model.20955_t Valid prediction for GeneMark_model.20969_t Valid prediction for GeneMark_model.20935_t Valid prediction for GlimmerHMM_glimmerT_12354-T1 Valid prediction for GeneMark_model.20923_t Valid prediction for pasa_asmbl_44094.p1 Valid prediction for snap_scaffold_5-snap.1299-T1 Valid prediction for GeneMark_model.20925_t Valid prediction for GeneMark_model.20987_t Valid prediction for GeneMark_model.20979_t Valid prediction for GlimmerHMM_glimmerT_12353-T1 Valid prediction for snap_scaffold_5-snap.1295-T1 Valid prediction for GlimmerHMM_glimmerT_12341-T1 Valid prediction for GeneMark_model.20973_t Valid prediction for snap_scaffold_5-snap.1313-T1 Valid prediction for Augustus_model.g8156.t1 Valid prediction for snap_scaffold_5-snap.1281-T1 Valid prediction for snap_scaffold_5-snap.1326-T1 Valid prediction for Augustus_model.g8162.t1 Valid prediction for snap_scaffold_5-snap.1293-T1 Valid prediction for GeneMark_model.20912_t Valid prediction for GlimmerHMM_glimmerT_12348-T1 Valid prediction for snap_scaffold_5-snap.1294-T1 Valid prediction for snap_scaffold_5-snap.1321-T1 Valid prediction for GlimmerHMM_glimmerT_12345-T1 Valid prediction for snap_scaffold_5-snap.1307-T1 Valid prediction for GeneMark_model.20978_t Valid prediction for GeneMark_model.20941_t Valid prediction for GeneMark_model.20949_t Valid prediction for snap_scaffold_5-snap.1324-T1 Valid prediction for GeneMark_model.20918_t Valid prediction for GeneMark_model.20971_t Valid prediction for GeneMark_model.20938_t Valid prediction for GlimmerHMM_glimmerT_12339-T1 Valid prediction for GeneMark_model.20983_t Valid prediction for snap_scaffold_5-snap.1290-T1 Valid prediction for GeneMark_model.20933_t Valid prediction for Augustus_model.g8158.t1 Valid prediction for GeneMark_model.20921_t Valid prediction for GeneMark_model.20917_t Valid prediction for GeneMark_model.20930_t Valid prediction for GeneMark_model.20966_t Valid prediction for snap_scaffold_5-snap.1282-T1 Valid prediction for snap_scaffold_5-snap.1319-T1 Valid prediction for snap_scaffold_5-snap.1287-T1 Valid prediction for GlimmerHMM_glimmerT_12335-T1 Valid prediction for GeneMark_model.20956_t Valid prediction for snap_scaffold_5-snap.1311-T1 Valid prediction for GeneMark_model.20960_t Valid prediction for Augustus_model.g8153.t1 Valid prediction for GeneMark_model.20985_t Valid prediction for Augustus_model.g8167.t1 Valid prediction for GlimmerHMM_glimmerT_12336-T1 Valid prediction for snap_scaffold_5-snap.1298-T1 Valid prediction for Augustus_model.g8161.t1 Valid prediction for GlimmerHMM_glimmerT_12346-T1 Valid prediction for snap_scaffold_5-snap.1283-T1 Sorry, intron length (9) is less than minimum required (10) Couldn't classify 201723, 201868 Sorry, prediction pasa_asmbl_44091.p2 fails validation. (ATG) GG 200487-200578 GT AGG (ATG) AG 201312-201412 GT TGG (ATG) AG 201723-201868 TA TGT -recovered pasa_asmbl_44091.p2, initial, 200487, 200578 add_exon() Sorry, pasa_asmbl_44091.p2 201312-201412-initial-1 is invalid. -recovered pasa_asmbl_44091.p2, initial, 201312, 201412 -recovered pasa_asmbl_44091.p2, internal, 201312, 201412 Valid prediction for GeneMark_model.20943_t Valid prediction for snap_scaffold_5-snap.1284-T1 Valid prediction for GlimmerHMM_glimmerT_12332-T1 Valid prediction for snap_scaffold_5-snap.1309-T1 Valid prediction for Augustus_model.g8170.t1 Valid prediction for snap_scaffold_5-snap.1280-T1 Valid prediction for snap_scaffold_5-snap.1291-T1 Valid prediction for GeneMark_model.20975_t Valid prediction for Augustus_model.g8160.t1 Valid prediction for GeneMark_model.20946_t Valid prediction for GlimmerHMM_glimmerT_12350-T1 Valid prediction for GeneMark_model.20990_t Valid prediction for GlimmerHMM_glimmerT_12342-T1 Valid prediction for GeneMark_model.20976_t Valid prediction for Augustus_model.g8151.t1 Valid prediction for Augustus_model.g8164.t1 Valid prediction for GeneMark_model.20963_t Valid prediction for snap_scaffold_5-snap.1303-T1 Valid prediction for HiQ_model.g8169.t1 Valid prediction for snap_scaffold_5-snap.1322-T1 Valid prediction for Augustus_model.g8163.t1 Valid prediction for snap_scaffold_5-snap.1317-T1 Valid prediction for GeneMark_model.20928_t Valid prediction for GlimmerHMM_glimmerT_12349-T1 Valid prediction for GeneMark_model.20995_t Valid prediction for Augustus_model.g8159.t1 Valid prediction for GeneMark_model.20951_t Valid prediction for Augustus_model.g8157.t1 Valid prediction for snap_scaffold_5-snap.1278-T1 Valid prediction for Augustus_model.g8166.t1 Valid prediction for GeneMark_model.20988_t Valid prediction for Augustus_model.g8152.t1 Valid prediction for snap_scaffold_5-snap.1302-T1 Valid prediction for GlimmerHMM_glimmerT_12347-T1 Valid prediction for GeneMark_model.20914_t Valid prediction for GeneMark_model.20953_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_5-snap.1288-T1 Valid prediction for GeneMark_model.20915_t Valid prediction for snap_scaffold_5-snap.1285-T1 Valid prediction for snap_scaffold_5-snap.1312-T1 Valid prediction for GeneMark_model.20962_t Valid prediction for GlimmerHMM_glimmerT_12352-T1 Valid prediction for snap_scaffold_5-snap.1328-T1 Valid prediction for snap_scaffold_5-snap.1301-T1 Valid prediction for GlimmerHMM_glimmerT_12344-T1 Valid prediction for snap_scaffold_5-snap.1305-T1 Valid prediction for CodingQuarry_transcript_51968-T1 Valid prediction for GeneMark_model.20957_t Valid prediction for GeneMark_model.20961_t Couldn't classify 11686, 11935 Sorry, prediction pasa_asmbl_45493.p1 fails validation. (NTC) AT 11686-11935 GT AGG (GCC) AG 12087-12345 GT GAG (AAA) AG 13603-13735 GT AGG (ATC) AG 15482-15616 GT AGG (GTG) AG 15757-15860 GT AAG (GGA) AG 16016-16253 AA AAA -recovered pasa_asmbl_45493.p1, terminal, 16016, 16253 -recovered pasa_asmbl_45493.p1, internal, 12087, 12345 -recovered pasa_asmbl_45493.p1, internal, 13603, 13735 -recovered pasa_asmbl_45493.p1, internal, 15482, 15616 -recovered pasa_asmbl_45493.p1, internal, 15757, 15860 Valid prediction for GlimmerHMM_glimmerT_12337-T1 Couldn't classify 181928, 182026 Sorry, prediction pasa_asmbl_46424.p1 fails validation. (ATG) CG 172552-172593 GT AGG (GCT) AG 173362-173428 GT AGG (AAC) AG 173648-173709 GT AGG (GCT) AG 173995-174021 GT AGG (GAG) AG 174184-174291 GT AGG (CTG) AG 174414-174570 GT AGG (CCC) AG 174870-175015 GT AGG (GCA) AG 175178-175226 GT CGG (AGG) AG 175838-175908 GT AGG (TCA) AG 176088-176135 GT AGG (CTA) AG 176260-176291 GT AGG (CTT) AG 176401-176448 GT AGG (GAC) AG 176840-176939 GT AGG (ACC) AG 177025-177102 GT AGG (GTA) AG 177937-178029 GT AGG (ATC) AG 178585-178698 GT AGG (GAG) AG 179031-179126 GT AGG (ACG) AG 179662-179874 GT AGG (GCT) AG 180159-180272 GT AGG (GAG) AG 180583-180660 GT AGG (GAG) AG 181593-181688 GT AGG (GAG) AG 181772-181828 GT CAG (CTG) AG 181928-182026 GG CAG -recovered pasa_asmbl_46424.p1, initial, 172552, 172593 -recovered pasa_asmbl_46424.p1, internal, 173362, 173428 -recovered pasa_asmbl_46424.p1, internal, 173648, 173709 -recovered pasa_asmbl_46424.p1, internal, 173995, 174021 -recovered pasa_asmbl_46424.p1, internal, 174184, 174291 -recovered pasa_asmbl_46424.p1, internal, 174414, 174570 -recovered pasa_asmbl_46424.p1, internal, 174870, 175015 -recovered pasa_asmbl_46424.p1, internal, 175178, 175226 -recovered pasa_asmbl_46424.p1, internal, 175838, 175908 -recovered pasa_asmbl_46424.p1, internal, 176088, 176135 -recovered pasa_asmbl_46424.p1, internal, 176260, 176291 -recovered pasa_asmbl_46424.p1, internal, 176401, 176448 -recovered pasa_asmbl_46424.p1, internal, 176840, 176939 -recovered pasa_asmbl_46424.p1, internal, 177025, 177102 -recovered pasa_asmbl_46424.p1, internal, 177937, 178029 -recovered pasa_asmbl_46424.p1, internal, 178585, 178698 -recovered pasa_asmbl_46424.p1, internal, 179031, 179126 -recovered pasa_asmbl_46424.p1, internal, 179662, 179874 -recovered pasa_asmbl_46424.p1, internal, 180159, 180272 -recovered pasa_asmbl_46424.p1, internal, 180583, 180660 -recovered pasa_asmbl_46424.p1, internal, 181593, 181688 -recovered pasa_asmbl_46424.p1, internal, 181772, 181828 Valid prediction for GeneMark_model.20964_t Valid prediction for GeneMark_model.20916_t Valid prediction for snap_scaffold_5-snap.1300-T1 Valid prediction for snap_scaffold_5-snap.1320-T1 Valid prediction for snap_scaffold_5-snap.1323-T1 Valid prediction for GeneMark_model.20947_t Valid prediction for Augustus_model.g8147.t1 Couldn't classify 4020, 4322 Sorry, prediction pasa_asmbl_45496.p1 fails validation. (ATG) GG 4020-4322 GA GTG Valid prediction for Augustus_model.g8172.t1 Valid prediction for GeneMark_model.20974_t Valid prediction for snap_scaffold_5-snap.1316-T1 Valid prediction for pasa_asmbl_45484.p1 Valid prediction for GeneMark_model.20931_t Valid prediction for GlimmerHMM_glimmerT_12334-T1 Valid prediction for GeneMark_model.20940_t Valid prediction for GeneMark_model.20977_t Valid prediction for GeneMark_model.20924_t Valid prediction for GeneMark_model.20994_t Valid prediction for GeneMark_model.20981_t Valid prediction for GeneMark_model.20980_t Valid prediction for GeneMark_model.20932_t Valid prediction for GeneMark_model.20992_t Valid prediction for GeneMark_model.20965_t Valid prediction for GeneMark_model.20954_t Valid prediction for snap_scaffold_5-snap.1297-T1 Valid prediction for GeneMark_model.20936_t Valid prediction for GeneMark_model.20950_t Valid prediction for GeneMark_model.20952_t Valid prediction for snap_scaffold_5-snap.1286-T1 Valid prediction for snap_scaffold_5-snap.1308-T1 Valid prediction for GeneMark_model.20972_t Valid prediction for GeneMark_model.20989_t Valid prediction for GeneMark_model.20984_t Valid prediction for GeneMark_model.20986_t Valid prediction for GeneMark_model.20937_t Valid prediction for GlimmerHMM_glimmerT_12343-T1 Valid prediction for GeneMark_model.20913_t Valid prediction for Augustus_model.g8150.t1 Valid prediction for GlimmerHMM_glimmerT_12338-T1 Valid prediction for snap_scaffold_5-snap.1318-T1 Valid prediction for Augustus_model.g8148.t1 Valid prediction for GeneMark_model.20919_t Valid prediction for GeneMark_model.20939_t Valid prediction for GlimmerHMM_glimmerT_12331-T1 Valid prediction for GeneMark_model.20996_t Valid prediction for snap_scaffold_5-snap.1279-T1 Valid prediction for GeneMark_model.20927_t Valid prediction for GeneMark_model.20967_t Valid prediction for GeneMark_model.20991_t Valid prediction for GlimmerHMM_glimmerT_12355-T1 Valid prediction for GeneMark_model.20982_t Valid prediction for Augustus_model.g8168.t1 Valid prediction for GeneMark_model.20934_t Valid prediction for snap_scaffold_5-snap.1289-T1 Valid prediction for Augustus_model.g8145.t1 Valid prediction for GlimmerHMM_glimmerT_12340-T1 Valid prediction for GeneMark_model.20926_t Valid prediction for GeneMark_model.20958_t Valid prediction for Augustus_model.g8154.t1 Valid prediction for snap_scaffold_5-snap.1327-T1 Valid prediction for GeneMark_model.20911_t Valid prediction for GeneMark_model.20970_t Valid prediction for GeneMark_model.20920_t Valid prediction for GeneMark_model.20959_t Valid prediction for GlimmerHMM_glimmerT_12333-T1 Valid prediction for Augustus_model.g8165.t1 Valid prediction for Augustus_model.g8149.t1 Valid prediction for Augustus_model.g8171.t1 Valid prediction for snap_scaffold_5-snap.1314-T1 Valid prediction for GlimmerHMM_glimmerT_12351-T1 Valid prediction for Augustus_model.g8155.t1 Valid prediction for GeneMark_model.20993_t Valid prediction for GeneMark_model.20968_t Valid prediction for GeneMark_model.20948_t Valid prediction for Augustus_model.g8146.t1 Valid prediction for snap_scaffold_5-snap.1304-T1 Valid prediction for snap_scaffold_5-snap.1306-T1 Valid prediction for snap_scaffold_5-snap.1292-T1 Valid prediction for snap_scaffold_5-snap.1310-T1 Valid prediction for GeneMark_model.20944_t Valid prediction for snap_scaffold_5-snap.1325-T1 Valid prediction for GeneMark_model.20929_t Valid prediction for GeneMark_model.20922_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 5003, rend_intergenic: 4309 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 27251, rend_intergenic: 5007 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 48414, rend_intergenic: 44618 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 54220, rend_intergenic: 48424 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67740, rend_intergenic: 55760 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74192, rend_intergenic: 71462 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 79697, rend_intergenic: 75483 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 93635, rend_intergenic: 93610 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 104425, rend_intergenic: 94316 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119576, rend_intergenic: 106403 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 129957, rend_intergenic: 119657 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 143757, rend_intergenic: 130200 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 151005, rend_intergenic: 145492 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 155333, rend_intergenic: 151170 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163646, rend_intergenic: 155403 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 166159, rend_intergenic: 164027 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 169446, rend_intergenic: 166245 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172284, rend_intergenic: 169934 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173808, rend_intergenic: 172438 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 174644, rend_intergenic: 174206 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 177692, rend_intergenic: 174864 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 189507, rend_intergenic: 181380 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 210182, rend_intergenic: 205477 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 222701, rend_intergenic: 217218 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 227792, rend_intergenic: 223761 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 228906, rend_intergenic: 228720 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 241068 -exon list size: 1115 building trellis 0.1 0.2 0.3 0.4 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.1 1.2 1.3 1.3 1.4 1.5 1.6 1.7 1.8 1.9 2.0 2.1 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 3.8 3.8 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.7 4.8 4.9 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.6 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.4 6.5 6.6 6.7 6.8 6.9 7.0 7.1 7.2 7.3 7.3 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.1 8.2 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.7 9.8 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.7 10.7 10.8 10.9 11.0 11.1 11.2 11.3 11.4 11.5 11.5 11.6 11.7 11.8 11.9 12.0 12.1 12.2 12.3 12.4 12.4 12.5 12.6 12.7 12.8 12.9 13.0 13.1 13.2 13.2 13.3 13.4 13.5 13.6 13.7 13.8 13.9 14.0 14.1 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.0 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.8 15.8 15.9 16.0 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.7 16.8 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.5 17.6 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.4 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.1 19.2 19.2 19.3 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.1 20.2 20.3 20.4 20.5 20.6 20.7 20.8 20.9 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 21.8 21.8 21.9 22.0 22.1 22.2 22.3 22.4 22.5 22.6 22.6 22.7 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.5 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.2 24.3 24.4 24.4 24.5 24.6 24.7 24.8 24.9 25.0 25.1 25.2 25.2 25.3 25.4 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.1 26.2 26.3 26.4 26.5 26.6 26.7 26.8 26.9 26.9 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.8 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.5 28.6 28.6 28.7 28.8 28.9 29.0 29.1 29.2 29.3 29.4 29.5 29.5 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.3 30.4 30.5 30.6 30.7 30.8 30.9 31.0 31.1 31.2 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.9 32.0 32.1 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.8 32.9 32.9 33.0 33.1 33.2 33.3 33.4 33.5 33.6 33.7 33.8 33.8 33.9 34.0 34.1 34.2 34.3 34.4 34.5 34.6 34.6 34.7 34.8 34.9 35.0 35.1 35.2 35.3 35.4 35.5 35.5 35.6 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.2 37.2 37.3 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.0 38.1 38.2 38.3 38.4 38.5 38.6 38.7 38.8 38.9 38.9 39.0 39.1 39.2 39.3 39.4 39.5 39.6 39.7 39.7 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.3 41.4 41.5 41.5 41.6 41.7 41.8 41.9 42.0 42.1 42.2 42.3 42.3 42.4 42.5 42.6 42.7 42.8 42.9 43.0 43.1 43.2 43.2 43.3 43.4 43.5 43.6 43.7 43.8 43.9 44.0 44.0 44.1 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 44.9 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.7 45.7 45.8 45.9 46.0 46.1 46.2 46.3 46.4 46.5 46.6 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.4 47.4 47.5 47.6 47.7 47.8 47.9 48.0 48.1 48.2 48.3 48.3 48.4 48.5 48.6 48.7 48.8 48.9 49.0 49.1 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.0 50.0 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.8 50.9 50.9 51.0 51.1 51.2 51.3 51.4 51.5 51.6 51.7 51.7 51.8 51.9 52.0 52.1 52.2 52.3 52.4 52.5 52.6 52.6 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.4 53.5 53.6 53.7 53.8 53.9 54.0 54.1 54.2 54.3 54.3 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.1 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.9 56.0 56.0 56.1 56.2 56.3 56.4 56.5 56.6 56.7 56.8 56.8 56.9 57.0 57.1 57.2 57.3 57.4 57.5 57.6 57.7 57.7 57.8 57.9 58.0 58.1 58.2 58.3 58.4 58.5 58.5 58.6 58.7 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.3 60.3 60.4 60.5 60.6 60.7 60.8 60.9 61.0 61.1 61.1 61.2 61.3 61.4 61.5 61.6 61.7 61.8 61.9 62.0 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.8 62.8 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.4 64.5 64.5 64.6 64.7 64.8 64.9 65.0 65.1 65.2 65.3 65.4 65.4 65.5 65.6 65.7 65.8 65.9 66.0 66.1 66.2 66.2 66.3 66.4 66.5 66.6 66.7 66.8 66.9 67.0 67.1 67.1 67.2 67.3 67.4 67.5 67.6 67.7 67.8 67.9 67.9 68.0 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.8 68.9 69.0 69.1 69.2 69.3 69.4 69.5 69.6 69.7 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.5 70.5 70.6 70.7 70.8 70.9 71.0 71.1 71.2 71.3 71.4 71.4 71.5 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.2 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.1 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.8 73.9 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.6 74.7 74.8 74.8 74.9 75.0 75.1 75.2 75.3 75.4 75.5 75.6 75.6 75.7 75.8 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.5 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.3 77.4 77.4 77.5 77.6 77.7 77.8 77.9 78.0 78.1 78.2 78.2 78.3 78.4 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.1 79.2 79.3 79.4 79.5 79.6 79.7 79.8 79.9 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.8 80.9 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.6 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.4 82.5 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.2 83.3 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.0 84.1 84.2 84.2 84.3 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.0 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.8 85.9 85.9 86.0 86.1 86.2 86.3 86.4 86.5 86.6 86.7 86.8 86.8 86.9 87.0 87.1 87.2 87.3 87.4 87.5 87.6 87.6 87.7 87.8 87.9 88.0 88.1 88.2 88.3 88.4 88.5 88.5 88.6 88.7 88.8 88.9 89.0 89.1 89.2 89.3 89.3 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.2 90.3 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.8 91.9 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.7 92.7 92.8 92.9 93.0 93.1 93.2 93.3 93.4 93.5 93.6 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.4 94.4 94.5 94.6 94.7 94.8 94.9 95.0 95.1 95.2 95.3 95.3 95.4 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.2 96.2 96.3 96.4 96.5 96.6 96.7 96.8 96.9 97.0 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.7 97.8 97.9 97.9 98.0 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.7 98.8 98.9 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.6 99.7 99.8 99.9 -found 49 predictions from path traversal Error with prediction: snap lend_intergenic: 5003, rend_intergenic: 4309 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 27251, rend_intergenic: 5007 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 48414, rend_intergenic: 44618 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 54220, rend_intergenic: 48424 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67740, rend_intergenic: 55760 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74192, rend_intergenic: 71462 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 79697, rend_intergenic: 75483 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 93635, rend_intergenic: 93610 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 104425, rend_intergenic: 94316 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119576, rend_intergenic: 106403 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 129957, rend_intergenic: 119657 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 143757, rend_intergenic: 130200 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 151005, rend_intergenic: 145492 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 155333, rend_intergenic: 151170 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163646, rend_intergenic: 155403 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 166159, rend_intergenic: 164027 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 169446, rend_intergenic: 166245 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172284, rend_intergenic: 169934 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173808, rend_intergenic: 172438 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 174644, rend_intergenic: 174206 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 177692, rend_intergenic: 174864 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 189507, rend_intergenic: 181380 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 210182, rend_intergenic: 205477 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 222701, rend_intergenic: 217218 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 227792, rend_intergenic: 223761 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 228906, rend_intergenic: 228720 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 22 predictions persist after filtering for low support