-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_5/scaffold_5_6186063-6360442 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.20894_t Valid prediction for Augustus_model.g8128.t1 Couldn't classify 100440, 100525 Sorry, prediction pasa_asmbl_44079.p1 fails validation. (AGA) AG 100440-100525 GT GGG (CTG) AG 100873-101047 GT GGG (GAT) AG 101225-101285 GT GGG (AGA) AG 101454-101538 GT GGG (GCT) AG 101770-101898 GT CTG (TGA) AG 102665-102737 GT AGG (CAA) AG 102949-103020 GT AAG (ATC) AG 103499-103587 GC AGG (GGA) AG 104099-104258 GT TGG (GCT) AG 104538-104671 GT AAG (GGA) AG 104913-105053 GT AGG (GCT) AG 105202-105322 GT AAG (GTG) AG 105434-105538 GT AGG (CTG) AG 105808-105904 GT GGG (GGA) AG 106157-106229 GT TGG (CTT) AG 106495-106594 CG GAC -recovered pasa_asmbl_44079.p1, terminal, 106495, 106594 -recovered pasa_asmbl_44079.p1, internal, 100440, 100525 -recovered pasa_asmbl_44079.p1, internal, 100873, 101047 -recovered pasa_asmbl_44079.p1, internal, 101225, 101285 -recovered pasa_asmbl_44079.p1, internal, 101454, 101538 -recovered pasa_asmbl_44079.p1, internal, 101770, 101898 -recovered pasa_asmbl_44079.p1, internal, 102665, 102737 -recovered pasa_asmbl_44079.p1, internal, 102949, 103020 -recovered pasa_asmbl_44079.p1, internal, 103499, 103587 -recovered pasa_asmbl_44079.p1, internal, 104099, 104258 -recovered pasa_asmbl_44079.p1, internal, 104538, 104671 -recovered pasa_asmbl_44079.p1, internal, 104913, 105053 -recovered pasa_asmbl_44079.p1, internal, 105202, 105322 -recovered pasa_asmbl_44079.p1, internal, 105434, 105538 -recovered pasa_asmbl_44079.p1, internal, 105808, 105904 -recovered pasa_asmbl_44079.p1, internal, 106157, 106229 Valid prediction for snap_scaffold_5-snap.1277-T1 Valid prediction for GeneMark_model.20889_t Valid prediction for snap_scaffold_5-snap.1261-T1 Couldn't classify 75206, 75323 Couldn't classify 75657, 75895 Sorry, prediction pasa_asmbl_44076.p1 fails validation. (AGG) TC 75206-75323 GT TGG (GCT) AG 75657-75895 CA GAC Valid prediction for snap_scaffold_5-snap.1260-T1 Valid prediction for CodingQuarry_transcript_51963-T1 Valid prediction for GeneMark_model.20886_t Valid prediction for GeneMark_model.20888_t Couldn't classify 1633, 2000 Couldn't classify 2995, 3099 Sorry, prediction pasa_asmbl_44068.p1 fails validation. (CAG) AC 1633-2000 GT CGG (GTT) AG 2671-2893 GT CGG (AAA) AG 2995-3099 GT CCG -recovered pasa_asmbl_44068.p1, internal, 2671, 2893 -recovered pasa_asmbl_44068.p1, internal, 2995, 3099 Valid prediction for Augustus_model.g8142.t1 Valid prediction for snap_scaffold_5-snap.1249-T1 Valid prediction for GeneMark_model.20881_t Valid prediction for GeneMark_model.20860_t Valid prediction for GlimmerHMM_glimmerT_12308-T1 Valid prediction for GeneMark_model.20875_t Valid prediction for GlimmerHMM_glimmerT_12321-T1 Valid prediction for GeneMark_model.20893_t Valid prediction for GlimmerHMM_glimmerT_12317-T1 Valid prediction for GeneMark_model.20871_t Valid prediction for GlimmerHMM_glimmerT_12326-T1 Valid prediction for snap_scaffold_5-snap.1263-T1 Valid prediction for GeneMark_model.20905_t Valid prediction for HiQ_model.g8132.t1 Valid prediction for Augustus_model.g8137.t1 Valid prediction for GeneMark_model.20899_t Valid prediction for GlimmerHMM_glimmerT_12319-T1 Valid prediction for Augustus_model.g8138.t1 Valid prediction for snap_scaffold_5-snap.1264-T1 Valid prediction for GlimmerHMM_glimmerT_12311-T1 Couldn't classify 161940, 162164 Sorry, prediction pasa_asmbl_44086.p1 fails validation. (AGA) AG 161940-162164 GT AGG (ATG) AG 162287-162396 GT GCG (AGG) AG 163047-163138 GT TGG (TAC) AG 163351-163661 GG GAG -recovered pasa_asmbl_44086.p1, initial, 162287, 162396 -recovered pasa_asmbl_44086.p1, terminal, 163351, 163661 -recovered pasa_asmbl_44086.p1, internal, 161940, 162164 -recovered pasa_asmbl_44086.p1, internal, 162287, 162396 -recovered pasa_asmbl_44086.p1, internal, 163047, 163138 Valid prediction for GlimmerHMM_glimmerT_12322-T1 Valid prediction for GeneMark_model.20906_t Valid prediction for GeneMark_model.20877_t Valid prediction for GeneMark_model.20907_t Valid prediction for snap_scaffold_5-snap.1245-T1 Couldn't classify 32300, 32993 Couldn't classify 34152, 34243 Sorry, prediction pasa_asmbl_44074.p1 fails validation. (CGT) TC 32300-32993 GT AGG (GAA) AG 34152-34243 GT TGG -recovered pasa_asmbl_44074.p1, internal, 34152, 34243 Valid prediction for snap_scaffold_5-snap.1276-T1 Valid prediction for GeneMark_model.20884_t Couldn't classify 99606, 99753 Sorry, prediction pasa_asmbl_44078.p1 fails validation. (ATG) TC 96982-97054 GT AGG (TGC) AG 97413-97554 GT GTG (GAT) AG 98379-98503 GT GAG (TCT) AG 99181-99315 GT GGG (GTG) AG 99427-99472 GT AGG (GGG) AG 99606-99753 CC CAC -recovered pasa_asmbl_44078.p1, initial, 96982, 97054 -recovered pasa_asmbl_44078.p1, internal, 97413, 97554 -recovered pasa_asmbl_44078.p1, internal, 98379, 98503 -recovered pasa_asmbl_44078.p1, internal, 99181, 99315 -recovered pasa_asmbl_44078.p1, internal, 99427, 99472 Valid prediction for snap_scaffold_5-snap.1242-T1 Valid prediction for GeneMark_model.20900_t Valid prediction for snap_scaffold_5-snap.1240-T1 Valid prediction for GeneMark_model.20883_t Valid prediction for CodingQuarry_transcript_51967-T1 Valid prediction for snap_scaffold_5-snap.1266-T1 Valid prediction for GeneMark_model.20879_t Valid prediction for GlimmerHMM_glimmerT_12320-T1 Valid prediction for GeneMark_model.20869_t Valid prediction for GeneMark_model.20896_t Valid prediction for GlimmerHMM_glimmerT_12310-T1 Valid prediction for snap_scaffold_5-snap.1253-T1 Valid prediction for pasa_asmbl_44085.p1 Valid prediction for snap_scaffold_5-snap.1271-T1 Couldn't classify 76010, 76529 Sorry, prediction pasa_asmbl_44077.p1 fails validation. (CCC) CA 76010-76529 GT TGG (CAG) AG 77387-77526 GT AGG (GTG) AG 78339-78449 GT AGG (GTG) AG 78781-79032 GA AGG -recovered pasa_asmbl_44077.p1, terminal, 78781, 79032 -recovered pasa_asmbl_44077.p1, internal, 77387, 77526 -recovered pasa_asmbl_44077.p1, internal, 78339, 78449 Valid prediction for Augustus_model.g8144.t1 Valid prediction for GeneMark_model.20910_t Valid prediction for snap_scaffold_5-snap.1235-T1 Valid prediction for Augustus_model.g8131.t1 Valid prediction for Augustus_model.g8140.t1 Valid prediction for GeneMark_model.20867_t Valid prediction for GlimmerHMM_glimmerT_12315-T1 Valid prediction for Augustus_model.g8129.t1 Valid prediction for Augustus_model.g8130.t1 Valid prediction for GlimmerHMM_glimmerT_12316-T1 Valid prediction for snap_scaffold_5-snap.1274-T1 Valid prediction for Augustus_model.g8136.t1 Couldn't classify 3196, 3715 Sorry, prediction pasa_asmbl_44070.p1 fails validation. (TTC) CC 3196-3715 GT AGG (GTG) AG 4023-4193 GT CGG (GTA) AG 4311-4491 GT AGG (CCG) AG 4654-4687 GC GAG -recovered pasa_asmbl_44070.p1, terminal, 4654, 4687 -recovered pasa_asmbl_44070.p1, internal, 4023, 4193 -recovered pasa_asmbl_44070.p1, internal, 4311, 4491 -recovered pasa_asmbl_44070.p1, internal, 4654, 4687 Valid prediction for GlimmerHMM_glimmerT_12309-T1 Valid prediction for snap_scaffold_5-snap.1250-T1 Valid prediction for GeneMark_model.20865_t Valid prediction for snap_scaffold_5-snap.1256-T1 Valid prediction for Augustus_model.g8134.t1 Valid prediction for GeneMark_model.20908_t Valid prediction for snap_scaffold_5-snap.1258-T1 Valid prediction for GeneMark_model.20898_t Valid prediction for snap_scaffold_5-snap.1259-T1 Valid prediction for Augustus_model.g8143.t1 Valid prediction for GlimmerHMM_glimmerT_12323-T1 Valid prediction for snap_scaffold_5-snap.1244-T1 Valid prediction for snap_scaffold_5-snap.1269-T1 Valid prediction for Augustus_model.g8127.t1 Valid prediction for snap_scaffold_5-snap.1254-T1 Valid prediction for GeneMark_model.20873_t Valid prediction for snap_scaffold_5-snap.1238-T1 Valid prediction for GeneMark_model.20863_t Valid prediction for GeneMark_model.20891_t Valid prediction for GeneMark_model.20903_t Valid prediction for snap_scaffold_5-snap.1265-T1 Valid prediction for snap_scaffold_5-snap.1251-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_5-snap.1241-T1 Valid prediction for GlimmerHMM_glimmerT_12313-T1 Valid prediction for GlimmerHMM_glimmerT_12324-T1 Valid prediction for GeneMark_model.20892_t Valid prediction for pasa_asmbl_45480.p1 Valid prediction for snap_scaffold_5-snap.1236-T1 Valid prediction for GeneMark_model.20880_t Valid prediction for GeneMark_model.20878_t Valid prediction for snap_scaffold_5-snap.1237-T1 Valid prediction for Augustus_model.g8135.t1 Valid prediction for GeneMark_model.20868_t Couldn't classify 24622, 24638 Sorry, prediction pasa_asmbl_45481.p1 fails validation. (ATC) CA 24622-24638 GT AGG (TGC) AG 24719-24832 GT AGG (GGG) AG 24977-25244 CA GAC -recovered pasa_asmbl_45481.p1, terminal, 24977, 25244 -recovered pasa_asmbl_45481.p1, internal, 24719, 24832 Valid prediction for snap_scaffold_5-snap.1267-T1 Valid prediction for GeneMark_model.20870_t Valid prediction for snap_scaffold_5-snap.1239-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for GeneMark_model.20885_t Valid prediction for snap_scaffold_5-snap.1247-T1 Valid prediction for GeneMark_model.20882_t Valid prediction for snap_scaffold_5-snap.1275-T1 Valid prediction for CodingQuarry_transcript_51965-T1 Valid prediction for snap_scaffold_5-snap.1268-T1 Valid prediction for snap_scaffold_5-snap.1252-T1 Valid prediction for GeneMark_model.20904_t Valid prediction for GeneMark_model.20897_t Valid prediction for GeneMark_model.20902_t Valid prediction for snap_scaffold_5-snap.1272-T1 Valid prediction for GeneMark_model.20866_t Valid prediction for GlimmerHMM_glimmerT_12314-T1 Valid prediction for GlimmerHMM_glimmerT_12306-T1 Couldn't classify 80261, 80298 Sorry, prediction pasa_asmbl_45474.p1 fails validation. (ATC) TT 80261-80298 GT AAG (GAA) AG 80627-80764 GT AAG (TGG) AG 80857-81037 GT AGG (GAG) AG 81154-81267 GT AGG (GAG) AG 81376-81490 GT AGG (TGT) AG 81672-81762 GT AAG (GCC) AG 81844-81922 GT AGG (CTT) AG 82040-82150 GT AGG (CAA) AG 82292-82405 GT GGG (CAA) AG 82641-82829 GT AGG (GAG) AG 82996-83135 GT AAG (GCT) AG 83423-83534 GT AGG (ATC) AG 84851-84964 GT AGG (GAC) AG 86222-86323 GT AGG (CTG) AG 87248-87391 GT TGG (GTG) AG 88949-89062 GT GGG (ATG) AG 89502-89637 GT AGG (GCA) AG 92320-92418 GT AGG (ATG) AG 92527-92681 AC GAA -recovered pasa_asmbl_45474.p1, initial, 89502, 89637 -recovered pasa_asmbl_45474.p1, terminal, 92527, 92681 -recovered pasa_asmbl_45474.p1, internal, 80627, 80764 -recovered pasa_asmbl_45474.p1, internal, 80857, 81037 -recovered pasa_asmbl_45474.p1, internal, 81154, 81267 -recovered pasa_asmbl_45474.p1, internal, 81376, 81490 -recovered pasa_asmbl_45474.p1, internal, 81672, 81762 -recovered pasa_asmbl_45474.p1, internal, 81844, 81922 -recovered pasa_asmbl_45474.p1, internal, 82040, 82150 -recovered pasa_asmbl_45474.p1, internal, 82292, 82405 -recovered pasa_asmbl_45474.p1, internal, 82641, 82829 -recovered pasa_asmbl_45474.p1, internal, 82996, 83135 -recovered pasa_asmbl_45474.p1, internal, 83423, 83534 -recovered pasa_asmbl_45474.p1, internal, 84851, 84964 -recovered pasa_asmbl_45474.p1, internal, 86222, 86323 -recovered pasa_asmbl_45474.p1, internal, 87248, 87391 -recovered pasa_asmbl_45474.p1, internal, 88949, 89062 -recovered pasa_asmbl_45474.p1, internal, 89502, 89637 -recovered pasa_asmbl_45474.p1, internal, 92320, 92418 Valid prediction for snap_scaffold_5-snap.1246-T1 Valid prediction for snap_scaffold_5-snap.1273-T1 Valid prediction for HiQ_model.g8139.t1 Valid prediction for snap_scaffold_5-snap.1262-T1 Valid prediction for GeneMark_model.20890_t Valid prediction for GeneMark_model.20862_t Couldn't classify 62169, 62307 Couldn't classify 63811, 63936 Sorry, prediction pasa_asmbl_45477.p1 fails validation. (CAC) CG 62169-62307 GT AGG (AGG) AG 62503-62750 GT AGG (GTC) AG 62864-63072 GT AGG (GTG) AG 63367-63463 GT AGG (GTT) AG 63811-63936 CA TCC add_exon() Sorry, pasa_asmbl_45477.p1 62864-63072-terminal-2 is invalid. -recovered pasa_asmbl_45477.p1, terminal, 62864, 63072 -recovered pasa_asmbl_45477.p1, internal, 62503, 62750 -recovered pasa_asmbl_45477.p1, internal, 62864, 63072 -recovered pasa_asmbl_45477.p1, internal, 63367, 63463 Valid prediction for GeneMark_model.20895_t Valid prediction for GlimmerHMM_glimmerT_12318-T1 Valid prediction for GeneMark_model.20864_t Valid prediction for GlimmerHMM_glimmerT_12307-T1 Valid prediction for GeneMark_model.20887_t Valid prediction for GeneMark_model.20861_t Valid prediction for HiQ_model.g8133.t1 Valid prediction for GlimmerHMM_glimmerT_12328-T1 Valid prediction for GeneMark_model.20901_t Valid prediction for snap_scaffold_5-snap.1243-T1 Valid prediction for Augustus_model.g8126.t1 Valid prediction for snap_scaffold_5-snap.1270-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for snap_scaffold_5-snap.1233-T1 Valid prediction for snap_scaffold_5-snap.1234-T1 Valid prediction for GeneMark_model.20872_t Valid prediction for GlimmerHMM_glimmerT_12329-T1 Valid prediction for GeneMark_model.20876_t Valid prediction for GeneMark_model.20909_t Valid prediction for snap_scaffold_5-snap.1257-T1 Valid prediction for GlimmerHMM_glimmerT_12327-T1 Valid prediction for GeneMark_model.20874_t Valid prediction for Augustus_model.g8141.t1 Valid prediction for snap_scaffold_5-snap.1255-T1 Valid prediction for GlimmerHMM_glimmerT_12312-T1 Valid prediction for GlimmerHMM_glimmerT_12325-T1 Valid prediction for snap_scaffold_5-snap.1248-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 16233, rend_intergenic: 13541 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 19205, rend_intergenic: 17296 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21073, rend_intergenic: 19634 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 22563, rend_intergenic: 21200 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 24341, rend_intergenic: 22809 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 45186, rend_intergenic: 35728 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62880, rend_intergenic: 51192 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75349, rend_intergenic: 63824 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 79032, rend_intergenic: 75626 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85695, rend_intergenic: 81700 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94102, rend_intergenic: 88065 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 114750, rend_intergenic: 110668 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 148569, rend_intergenic: 146729 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 150914, rend_intergenic: 148909 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 154130, rend_intergenic: 150955 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163624, rend_intergenic: 157991 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172701, rend_intergenic: 165180 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 174380 -exon list size: 755 building trellis 0.1 0.3 0.4 0.5 0.7 0.8 0.9 1.1 1.2 1.3 1.5 1.6 1.7 1.8 2.0 2.1 2.2 2.4 2.5 2.6 2.8 2.9 3.0 3.2 3.3 3.4 3.6 3.7 3.8 4.0 4.1 4.2 4.4 4.5 4.6 4.8 4.9 5.0 5.2 5.3 5.4 5.5 5.7 5.8 5.9 6.1 6.2 6.3 6.5 6.6 6.7 6.9 7.0 7.1 7.3 7.4 7.5 7.7 7.8 7.9 8.1 8.2 8.3 8.5 8.6 8.7 8.9 9.0 9.1 9.2 9.4 9.5 9.6 9.8 9.9 10.0 10.2 10.3 10.4 10.6 10.7 10.8 11.0 11.1 11.2 11.4 11.5 11.6 11.8 11.9 12.0 12.2 12.3 12.4 12.5 12.7 12.8 12.9 13.1 13.2 13.3 13.5 13.6 13.7 13.9 14.0 14.1 14.3 14.4 14.5 14.7 14.8 14.9 15.1 15.2 15.3 15.5 15.6 15.7 15.9 16.0 16.1 16.2 16.4 16.5 16.6 16.8 16.9 17.0 17.2 17.3 17.4 17.6 17.7 17.8 18.0 18.1 18.2 18.4 18.5 18.6 18.8 18.9 19.0 19.2 19.3 19.4 19.6 19.7 19.8 19.9 20.1 20.2 20.3 20.5 20.6 20.7 20.9 21.0 21.1 21.3 21.4 21.5 21.7 21.8 21.9 22.1 22.2 22.3 22.5 22.6 22.7 22.9 23.0 23.1 23.2 23.4 23.5 23.6 23.8 23.9 24.0 24.2 24.3 24.4 24.6 24.7 24.8 25.0 25.1 25.2 25.4 25.5 25.6 25.8 25.9 26.0 26.2 26.3 26.4 26.6 26.7 26.8 26.9 27.1 27.2 27.3 27.5 27.6 27.7 27.9 28.0 28.1 28.3 28.4 28.5 28.7 28.8 28.9 29.1 29.2 29.3 29.5 29.6 29.7 29.9 30.0 30.1 30.3 30.4 30.5 30.6 30.8 30.9 31.0 31.2 31.3 31.4 31.6 31.7 31.8 32.0 32.1 32.2 32.4 32.5 32.6 32.8 32.9 33.0 33.2 33.3 33.4 33.6 33.7 33.8 33.9 34.1 34.2 34.3 34.5 34.6 34.7 34.9 35.0 35.1 35.3 35.4 35.5 35.7 35.8 35.9 36.1 36.2 36.3 36.5 36.6 36.7 36.9 37.0 37.1 37.3 37.4 37.5 37.6 37.8 37.9 38.0 38.2 38.3 38.4 38.6 38.7 38.8 39.0 39.1 39.2 39.4 39.5 39.6 39.8 39.9 40.0 40.2 40.3 40.4 40.6 40.7 40.8 41.0 41.1 41.2 41.3 41.5 41.6 41.7 41.9 42.0 42.1 42.3 42.4 42.5 42.7 42.8 42.9 43.1 43.2 43.3 43.5 43.6 43.7 43.9 44.0 44.1 44.3 44.4 44.5 44.6 44.8 44.9 45.0 45.2 45.3 45.4 45.6 45.7 45.8 46.0 46.1 46.2 46.4 46.5 46.6 46.8 46.9 47.0 47.2 47.3 47.4 47.6 47.7 47.8 48.0 48.1 48.2 48.3 48.5 48.6 48.7 48.9 49.0 49.1 49.3 49.4 49.5 49.7 49.8 49.9 50.1 50.2 50.3 50.5 50.6 50.7 50.9 51.0 51.1 51.3 51.4 51.5 51.7 51.8 51.9 52.0 52.2 52.3 52.4 52.6 52.7 52.8 53.0 53.1 53.2 53.4 53.5 53.6 53.8 53.9 54.0 54.2 54.3 54.4 54.6 54.7 54.8 55.0 55.1 55.2 55.4 55.5 55.6 55.7 55.9 56.0 56.1 56.3 56.4 56.5 56.7 56.8 56.9 57.1 57.2 57.3 57.5 57.6 57.7 57.9 58.0 58.1 58.3 58.4 58.5 58.7 58.8 58.9 59.0 59.2 59.3 59.4 59.6 59.7 59.8 60.0 60.1 60.2 60.4 60.5 60.6 60.8 60.9 61.0 61.2 61.3 61.4 61.6 61.7 61.8 62.0 62.1 62.2 62.4 62.5 62.6 62.7 62.9 63.0 63.1 63.3 63.4 63.5 63.7 63.8 63.9 64.1 64.2 64.3 64.5 64.6 64.7 64.9 65.0 65.1 65.3 65.4 65.5 65.7 65.8 65.9 66.1 66.2 66.3 66.4 66.6 66.7 66.8 67.0 67.1 67.2 67.4 67.5 67.6 67.8 67.9 68.0 68.2 68.3 68.4 68.6 68.7 68.8 69.0 69.1 69.2 69.4 69.5 69.6 69.7 69.9 70.0 70.1 70.3 70.4 70.5 70.7 70.8 70.9 71.1 71.2 71.3 71.5 71.6 71.7 71.9 72.0 72.1 72.3 72.4 72.5 72.7 72.8 72.9 73.1 73.2 73.3 73.4 73.6 73.7 73.8 74.0 74.1 74.2 74.4 74.5 74.6 74.8 74.9 75.0 75.2 75.3 75.4 75.6 75.7 75.8 76.0 76.1 76.2 76.4 76.5 76.6 76.8 76.9 77.0 77.1 77.3 77.4 77.5 77.7 77.8 77.9 78.1 78.2 78.3 78.5 78.6 78.7 78.9 79.0 79.1 79.3 79.4 79.5 79.7 79.8 79.9 80.1 80.2 80.3 80.4 80.6 80.7 80.8 81.0 81.1 81.2 81.4 81.5 81.6 81.8 81.9 82.0 82.2 82.3 82.4 82.6 82.7 82.8 83.0 83.1 83.2 83.4 83.5 83.6 83.8 83.9 84.0 84.1 84.3 84.4 84.5 84.7 84.8 84.9 85.1 85.2 85.3 85.5 85.6 85.7 85.9 86.0 86.1 86.3 86.4 86.5 86.7 86.8 86.9 87.1 87.2 87.3 87.5 87.6 87.7 87.8 88.0 88.1 88.2 88.4 88.5 88.6 88.8 88.9 89.0 89.2 89.3 89.4 89.6 89.7 89.8 90.0 90.1 90.2 90.4 90.5 90.6 90.8 90.9 91.0 91.1 91.3 91.4 91.5 91.7 91.8 91.9 92.1 92.2 92.3 92.5 92.6 92.7 92.9 93.0 93.1 93.3 93.4 93.5 93.7 93.8 93.9 94.1 94.2 94.3 94.5 94.6 94.7 94.8 95.0 95.1 95.2 95.4 95.5 95.6 95.8 95.9 96.0 96.2 96.3 96.4 96.6 96.7 96.8 97.0 97.1 97.2 97.4 97.5 97.6 97.8 97.9 98.0 98.2 98.3 98.4 98.5 98.7 98.8 98.9 99.1 99.2 99.3 99.5 99.6 99.7 99.9 -found 34 predictions from path traversal Error with prediction: snap lend_intergenic: 16233, rend_intergenic: 13541 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 19205, rend_intergenic: 17296 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21073, rend_intergenic: 19634 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 22563, rend_intergenic: 21200 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 24341, rend_intergenic: 22809 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 45186, rend_intergenic: 35728 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62880, rend_intergenic: 51192 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75349, rend_intergenic: 63824 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 79032, rend_intergenic: 75626 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85695, rend_intergenic: 81700 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94102, rend_intergenic: 88065 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 114750, rend_intergenic: 110668 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 148569, rend_intergenic: 146729 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 150914, rend_intergenic: 148909 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 154130, rend_intergenic: 150955 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163624, rend_intergenic: 157991 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172701, rend_intergenic: 165180 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 22 predictions persist after filtering for low support