-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_5/scaffold_5_4244516-4516289 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_12044-T1 Valid prediction for snap_scaffold_5-snap.843-T1 Valid prediction for GeneMark_model.20402_t Valid prediction for GeneMark_model.20392_t Couldn't classify 225907, 226095 Sorry, prediction pasa_asmbl_43930.p1 fails validation. (ATG) CA 224747-224875 GT AGG (TTG) AG 225123-225231 GT AGG (TGA) AG 225346-225578 GT CCG (GTG) AG 225907-226095 CA CAC -recovered pasa_asmbl_43930.p1, initial, 224747, 224875 add_exon() Sorry, pasa_asmbl_43930.p1 225123-225231-terminal-3 is invalid. -recovered pasa_asmbl_43930.p1, terminal, 225123, 225231 -recovered pasa_asmbl_43930.p1, internal, 225123, 225231 -recovered pasa_asmbl_43930.p1, internal, 225346, 225578 Valid prediction for GlimmerHMM_glimmerT_12049-T1 Valid prediction for GeneMark_model.20351_t Valid prediction for snap_scaffold_5-snap.890-T1 Valid prediction for GlimmerHMM_glimmerT_12057-T1 Valid prediction for Augustus_model.g7945.t1 Valid prediction for Augustus_model.g7941.t1 Valid prediction for GeneMark_model.20312_t Valid prediction for GeneMark_model.20373_t Valid prediction for snap_scaffold_5-snap.840-T1 Valid prediction for snap_scaffold_5-snap.864-T1 Valid prediction for GeneMark_model.20383_t Valid prediction for snap_scaffold_5-snap.875-T1 Valid prediction for GeneMark_model.20357_t Valid prediction for GeneMark_model.20399_t Valid prediction for snap_scaffold_5-snap.883-T1 Valid prediction for Augustus_model.g7942.t1 Valid prediction for GeneMark_model.20395_t Valid prediction for GeneMark_model.20321_t Valid prediction for snap_scaffold_5-snap.885-T1 Valid prediction for GlimmerHMM_glimmerT_12048-T1 Valid prediction for Augustus_model.g7943.t1 Valid prediction for snap_scaffold_5-snap.858-T1 Valid prediction for GeneMark_model.20336_t Valid prediction for GeneMark_model.20379_t Valid prediction for GlimmerHMM_glimmerT_12063-T1 Valid prediction for GeneMark_model.20382_t Valid prediction for snap_scaffold_5-snap.842-T1 Valid prediction for GeneMark_model.20343_t Valid prediction for GeneMark_model.20377_t Valid prediction for GeneMark_model.20319_t Valid prediction for GlimmerHMM_glimmerT_12056-T1 Valid prediction for snap_scaffold_5-snap.851-T1 Valid prediction for GeneMark_model.20366_t Valid prediction for snap_scaffold_5-snap.855-T1 Valid prediction for Augustus_model.g7937.t1 Valid prediction for GlimmerHMM_glimmerT_12067-T1 Valid prediction for GlimmerHMM_glimmerT_12039-T1 Valid prediction for snap_scaffold_5-snap.881-T1 Valid prediction for Augustus_model.g7935.t1 Valid prediction for snap_scaffold_5-snap.873-T1 Valid prediction for GeneMark_model.20348_t Valid prediction for snap_scaffold_5-snap.867-T1 Valid prediction for snap_scaffold_5-snap.865-T1 Sorry, intron length (3) is less than minimum required (10) Couldn't classify 131631, 131707 Sorry, prediction GeneMark_model.20368_t fails validation. (ATG) TG 130620-130648 GT ACG (CGG) AG 130693-130725 GT CAG (GGA) AG 131349-131564 GT GGG (ACA) AG 131631-131707 GT GAG -recovered GeneMark_model.20368_t, initial, 130620, 130648 -recovered GeneMark_model.20368_t, internal, 130693, 130725 -recovered GeneMark_model.20368_t, internal, 131349, 131564 -recovered GeneMark_model.20368_t, internal, 131631, 131707 Valid prediction for snap_scaffold_5-snap.878-T1 Valid prediction for Augustus_model.g7926.t1 Valid prediction for GeneMark_model.20334_t Valid prediction for snap_scaffold_5-snap.898-T1 Valid prediction for snap_scaffold_5-snap.907-T1 Valid prediction for GeneMark_model.20393_t Valid prediction for snap_scaffold_5-snap.905-T1 Valid prediction for snap_scaffold_5-snap.853-T1 Valid prediction for Augustus_model.g7949.t1 Valid prediction for GlimmerHMM_glimmerT_12051-T1 Valid prediction for GeneMark_model.20388_t Valid prediction for Augustus_model.g7939.t1 Valid prediction for GeneMark_model.20350_t Valid prediction for GeneMark_model.20325_t Valid prediction for GeneMark_model.20360_t Valid prediction for snap_scaffold_5-snap.870-T1 Valid prediction for GeneMark_model.20362_t Valid prediction for GlimmerHMM_glimmerT_12066-T1 Valid prediction for GeneMark_model.20390_t Valid prediction for GlimmerHMM_glimmerT_12046-T1 Valid prediction for GeneMark_model.20330_t Valid prediction for GeneMark_model.20323_t Valid prediction for snap_scaffold_5-snap.897-T1 Valid prediction for GlimmerHMM_glimmerT_12071-T1 Valid prediction for snap_scaffold_5-snap.876-T1 Valid prediction for GlimmerHMM_glimmerT_12055-T1 Valid prediction for GlimmerHMM_glimmerT_12053-T1 Valid prediction for GeneMark_model.20332_t Valid prediction for snap_scaffold_5-snap.893-T1 Valid prediction for snap_scaffold_5-snap.850-T1 Couldn't classify 237919, 237969 Couldn't classify 243197, 243244 Sorry, prediction pasa_asmbl_43932.p1 fails validation. (CTG) TG 237919-237969 GT AGG (CTC) AG 239606-239718 GT AAG (GGT) AG 240028-240190 GT AGG (TAC) AG 240754-240846 GT AGG (GGG) AG 241440-241586 GT AGG (GCG) AG 241920-242062 GT CGG (GGA) AG 242836-242998 GT AGG (GGT) AG 243197-243244 AG AGA -recovered pasa_asmbl_43932.p1, internal, 239606, 239718 -recovered pasa_asmbl_43932.p1, internal, 240028, 240190 -recovered pasa_asmbl_43932.p1, internal, 240754, 240846 -recovered pasa_asmbl_43932.p1, internal, 241440, 241586 -recovered pasa_asmbl_43932.p1, internal, 241920, 242062 -recovered pasa_asmbl_43932.p1, internal, 242836, 242998 Valid prediction for GeneMark_model.20374_t Valid prediction for snap_scaffold_5-snap.887-T1 Valid prediction for GlimmerHMM_glimmerT_12038-T1 Valid prediction for GeneMark_model.20380_t Valid prediction for GeneMark_model.20355_t Valid prediction for GeneMark_model.20345_t Valid prediction for snap_scaffold_5-snap.889-T1 Valid prediction for GlimmerHMM_glimmerT_12073-T1 Valid prediction for snap_scaffold_5-snap.863-T1 Valid prediction for GeneMark_model.20353_t Valid prediction for GeneMark_model.20386_t Valid prediction for GeneMark_model.20371_t Valid prediction for GlimmerHMM_glimmerT_12037-T1 Valid prediction for GlimmerHMM_glimmerT_12060-T1 Valid prediction for snap_scaffold_5-snap.899-T1 Valid prediction for snap_scaffold_5-snap.846-T1 Valid prediction for GeneMark_model.20364_t Valid prediction for GeneMark_model.20370_t Couldn't classify 228238, 228484 Couldn't classify 235666, 235883 Sorry, prediction pasa_asmbl_43931.p1 fails validation. (AGC) CT 228238-228484 GT AGG (GCC) AG 229368-229583 GT AGG (ACC) AG 229933-230138 GT AGG (ATC) AG 230936-231058 GT AGG (GCT) AG 231252-231335 GT AGG (GTG) AG 232201-232293 GT AGG (GTG) AG 232441-232575 GT AGG (GCT) AG 233066-233195 GT TGG (CTG) AG 235666-235883 GT ACG -recovered pasa_asmbl_43931.p1, internal, 229368, 229583 -recovered pasa_asmbl_43931.p1, internal, 229933, 230138 -recovered pasa_asmbl_43931.p1, internal, 230936, 231058 -recovered pasa_asmbl_43931.p1, internal, 231252, 231335 -recovered pasa_asmbl_43931.p1, internal, 232201, 232293 -recovered pasa_asmbl_43931.p1, internal, 232441, 232575 -recovered pasa_asmbl_43931.p1, internal, 233066, 233195 -recovered pasa_asmbl_43931.p1, internal, 235666, 235883 Valid prediction for snap_scaffold_5-snap.839-T1 Valid prediction for snap_scaffold_5-snap.848-T1 Valid prediction for snap_scaffold_5-snap.895-T1 Valid prediction for GeneMark_model.20397_t Valid prediction for snap_scaffold_5-snap.859-T1 Valid prediction for snap_scaffold_5-snap.902-T1 Valid prediction for GeneMark_model.20317_t Valid prediction for snap_scaffold_5-snap.879-T1 Valid prediction for GeneMark_model.20346_t Valid prediction for GeneMark_model.20327_t Valid prediction for GeneMark_model.20328_t Valid prediction for GlimmerHMM_glimmerT_12059-T1 Valid prediction for GeneMark_model.20341_t Valid prediction for Augustus_model.g7936.t1 Valid prediction for GeneMark_model.20338_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_5-snap.857-T1 Valid prediction for GeneMark_model.20322_t Valid prediction for snap_scaffold_5-snap.872-T1 Valid prediction for snap_scaffold_5-snap.884-T1 Valid prediction for snap_scaffold_5-snap.896-T1 Couldn't classify 21040, 21393 Sorry, prediction pasa_asmbl_45349.p2 fails validation. (ATG) AG 21040-21393 GG CAG Valid prediction for GeneMark_model.20372_t Valid prediction for Augustus_model.g7928.t1 Valid prediction for GeneMark_model.20375_t Valid prediction for GeneMark_model.20391_t Valid prediction for GeneMark_model.20378_t Valid prediction for Augustus_model.g7930.t1 Valid prediction for snap_scaffold_5-snap.901-T1 Valid prediction for GlimmerHMM_glimmerT_12061-T1 Valid prediction for GeneMark_model.20313_t Valid prediction for GeneMark_model.20358_t Valid prediction for GlimmerHMM_glimmerT_12069-T1 Valid prediction for GeneMark_model.20310_t Valid prediction for GeneMark_model.20384_t Valid prediction for snap_scaffold_5-snap.856-T1 Valid prediction for snap_scaffold_5-snap.888-T1 Valid prediction for GeneMark_model.20367_t Valid prediction for GeneMark_model.20352_t Valid prediction for GeneMark_model.20331_t Valid prediction for GlimmerHMM_glimmerT_12052-T1 Valid prediction for GeneMark_model.20311_t Valid prediction for GeneMark_model.20326_t Valid prediction for GeneMark_model.20400_t Valid prediction for GeneMark_model.20329_t Valid prediction for snap_scaffold_5-snap.874-T1 Couldn't classify 23262, 23456 Sorry, prediction pasa_asmbl_45348.p1 fails validation. (GTG) AG 23262-23456 GT AGG (GAC) AG 23888-24083 GT AGG (GAG) AG 24239-24408 AG GAA -recovered pasa_asmbl_45348.p1, terminal, 24239, 24408 -recovered pasa_asmbl_45348.p1, internal, 23262, 23456 -recovered pasa_asmbl_45348.p1, internal, 23888, 24083 Valid prediction for snap_scaffold_5-snap.886-T1 Valid prediction for Augustus_model.g7933.t1 Valid prediction for GeneMark_model.20333_t Valid prediction for Augustus_model.g7944.t1 Valid prediction for snap_scaffold_5-snap.871-T1 Valid prediction for GeneMark_model.20347_t Valid prediction for GlimmerHMM_glimmerT_12045-T1 Valid prediction for Augustus_model.g7929.t1 Valid prediction for Augustus_model.g7927.t1 Valid prediction for GlimmerHMM_glimmerT_12041-T1 Valid prediction for GeneMark_model.20324_t Valid prediction for GlimmerHMM_glimmerT_12050-T1 Valid prediction for GeneMark_model.20356_t Valid prediction for GlimmerHMM_glimmerT_12040-T1 Valid prediction for snap_scaffold_5-snap.862-T1 Valid prediction for Augustus_model.g7934.t1 Valid prediction for snap_scaffold_5-snap.866-T1 Valid prediction for snap_scaffold_5-snap.852-T1 Valid prediction for snap_scaffold_5-snap.882-T1 Valid prediction for snap_scaffold_5-snap.841-T1 Valid prediction for snap_scaffold_5-snap.894-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for snap_scaffold_5-snap.869-T1 Valid prediction for GeneMark_model.20398_t Valid prediction for GeneMark_model.20316_t Valid prediction for snap_scaffold_5-snap.880-T1 Valid prediction for snap_scaffold_5-snap.861-T1 Valid prediction for GlimmerHMM_glimmerT_12068-T1 Valid prediction for GlimmerHMM_glimmerT_12065-T1 Valid prediction for Augustus_model.g7940.t1 Valid prediction for HiQ_model.g7946.t1 Valid prediction for GlimmerHMM_glimmerT_12070-T1 Valid prediction for GeneMark_model.20394_t Valid prediction for snap_scaffold_5-snap.892-T1 Valid prediction for GeneMark_model.20369_t Valid prediction for GeneMark_model.20365_t Valid prediction for Augustus_model.g7938.t1 Valid prediction for snap_scaffold_5-snap.847-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for snap_scaffold_5-snap.906-T1 Valid prediction for snap_scaffold_5-snap.903-T1 Valid prediction for Augustus_model.g7931.t1 Valid prediction for GlimmerHMM_glimmerT_12042-T1 Valid prediction for GeneMark_model.20359_t Valid prediction for GeneMark_model.20385_t Valid prediction for Augustus_model.g7923.t1 Valid prediction for GeneMark_model.20337_t Valid prediction for snap_scaffold_5-snap.849-T1 Valid prediction for Augustus_model.g7947.t1 Valid prediction for GeneMark_model.20342_t Valid prediction for GlimmerHMM_glimmerT_12054-T1 Valid prediction for GeneMark_model.20318_t Valid prediction for GeneMark_model.20335_t Valid prediction for GlimmerHMM_glimmerT_12072-T1 Valid prediction for snap_scaffold_5-snap.868-T1 Valid prediction for GeneMark_model.20363_t Valid prediction for GeneMark_model.20389_t Valid prediction for Augustus_model.g7932.t1 Valid prediction for GeneMark_model.20387_t Valid prediction for GeneMark_model.20339_t Valid prediction for snap_scaffold_5-snap.854-T1 Valid prediction for snap_scaffold_5-snap.845-T1 Valid prediction for GeneMark_model.20349_t Valid prediction for snap_scaffold_5-snap.877-T1 Valid prediction for GeneMark_model.20361_t Valid prediction for GeneMark_model.20376_t Valid prediction for Augustus_model.g7925.t1 Valid prediction for GeneMark_model.20401_t Valid prediction for snap_scaffold_5-snap.900-T1 Valid prediction for GlimmerHMM_glimmerT_12062-T1 Valid prediction for GeneMark_model.20340_t Valid prediction for GlimmerHMM_glimmerT_12075-T1 Valid prediction for GeneMark_model.20320_t Valid prediction for GlimmerHMM_glimmerT_12043-T1 Valid prediction for Augustus_model.g7948.t1 Valid prediction for GlimmerHMM_glimmerT_12074-T1 Valid prediction for GlimmerHMM_glimmerT_12064-T1 Valid prediction for snap_scaffold_5-snap.904-T1 Valid prediction for GeneMark_model.20381_t Valid prediction for snap_scaffold_5-snap.891-T1 Valid prediction for snap_scaffold_5-snap.838-T1 Valid prediction for GeneMark_model.20354_t Valid prediction for GlimmerHMM_glimmerT_12058-T1 Valid prediction for snap_scaffold_5-snap.860-T1 Valid prediction for snap_scaffold_5-snap.844-T1 Valid prediction for GlimmerHMM_glimmerT_12047-T1 Valid prediction for Augustus_model.g7924.t1 Valid prediction for GeneMark_model.20396_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 11897, rend_intergenic: 2689 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 13312, rend_intergenic: 11916 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 19384, rend_intergenic: 13368 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 27689, rend_intergenic: 22728 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31004, rend_intergenic: 28415 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31604, rend_intergenic: 31321 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 38433, rend_intergenic: 32122 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 44027, rend_intergenic: 41557 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 44678, rend_intergenic: 44105 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47500, rend_intergenic: 46463 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50456, rend_intergenic: 48047 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56850, rend_intergenic: 52198 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 57903, rend_intergenic: 57244 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 83983, rend_intergenic: 63386 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 87412, rend_intergenic: 85028 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94414, rend_intergenic: 90163 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97080, rend_intergenic: 95837 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 106449, rend_intergenic: 97166 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 111857, rend_intergenic: 107051 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121969, rend_intergenic: 117460 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142356, rend_intergenic: 124774 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142579, rend_intergenic: 142380 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 150197, rend_intergenic: 146470 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156244, rend_intergenic: 150734 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 170938, rend_intergenic: 169561 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200728, rend_intergenic: 193099 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203109, rend_intergenic: 201347 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 205287, rend_intergenic: 203116 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 207095, rend_intergenic: 205583 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 268793, rend_intergenic: 265404 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 79952, rend_intergenic: 79949 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 142356, rend_intergenic: 142353 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 271774 -exon list size: 1220 building trellis 0.1 0.2 0.2 0.3 0.4 0.5 0.6 0.7 0.7 0.8 0.9 1.0 1.1 1.1 1.2 1.3 1.4 1.5 1.6 1.6 1.7 1.8 1.9 2.0 2.0 2.1 2.2 2.3 2.4 2.5 2.5 2.6 2.7 2.8 2.9 2.9 3.0 3.1 3.2 3.3 3.4 3.4 3.5 3.6 3.7 3.8 3.8 3.9 4.0 4.1 4.2 4.3 4.3 4.4 4.5 4.6 4.7 4.7 4.8 4.9 5.0 5.1 5.2 5.2 5.3 5.4 5.5 5.6 5.6 5.7 5.8 5.9 6.0 6.1 6.1 6.2 6.3 6.4 6.5 6.5 6.6 6.7 6.8 6.9 7.0 7.0 7.1 7.2 7.3 7.4 7.4 7.5 7.6 7.7 7.8 7.9 7.9 8.0 8.1 8.2 8.3 8.3 8.4 8.5 8.6 8.7 8.8 8.8 8.9 9.0 9.1 9.2 9.2 9.3 9.4 9.5 9.6 9.7 9.7 9.8 9.9 10.0 10.1 10.1 10.2 10.3 10.4 10.5 10.6 10.6 10.7 10.8 10.9 11.0 11.0 11.1 11.2 11.3 11.4 11.5 11.5 11.6 11.7 11.8 11.9 11.9 12.0 12.1 12.2 12.3 12.4 12.4 12.5 12.6 12.7 12.8 12.8 12.9 13.0 13.1 13.2 13.3 13.3 13.4 13.5 13.6 13.7 13.7 13.8 13.9 14.0 14.1 14.2 14.2 14.3 14.4 14.5 14.6 14.6 14.7 14.8 14.9 15.0 15.1 15.1 15.2 15.3 15.4 15.5 15.5 15.6 15.7 15.8 15.9 16.0 16.0 16.1 16.2 16.3 16.4 16.4 16.5 16.6 16.7 16.8 16.9 16.9 17.0 17.1 17.2 17.3 17.3 17.4 17.5 17.6 17.7 17.8 17.8 17.9 18.0 18.1 18.2 18.2 18.3 18.4 18.5 18.6 18.7 18.7 18.8 18.9 19.0 19.1 19.1 19.2 19.3 19.4 19.5 19.6 19.6 19.7 19.8 19.9 20.0 20.0 20.1 20.2 20.3 20.4 20.5 20.5 20.6 20.7 20.8 20.9 20.9 21.0 21.1 21.2 21.3 21.4 21.4 21.5 21.6 21.7 21.8 21.8 21.9 22.0 22.1 22.2 22.3 22.3 22.4 22.5 22.6 22.7 22.7 22.8 22.9 23.0 23.1 23.2 23.2 23.3 23.4 23.5 23.6 23.6 23.7 23.8 23.9 24.0 24.1 24.1 24.2 24.3 24.4 24.5 24.5 24.6 24.7 24.8 24.9 25.0 25.0 25.1 25.2 25.3 25.4 25.5 25.5 25.6 25.7 25.8 25.9 25.9 26.0 26.1 26.2 26.3 26.4 26.4 26.5 26.6 26.7 26.8 26.8 26.9 27.0 27.1 27.2 27.3 27.3 27.4 27.5 27.6 27.7 27.7 27.8 27.9 28.0 28.1 28.2 28.2 28.3 28.4 28.5 28.6 28.6 28.7 28.8 28.9 29.0 29.1 29.1 29.2 29.3 29.4 29.5 29.5 29.6 29.7 29.8 29.9 30.0 30.0 30.1 30.2 30.3 30.4 30.4 30.5 30.6 30.7 30.8 30.9 30.9 31.0 31.1 31.2 31.3 31.3 31.4 31.5 31.6 31.7 31.8 31.8 31.9 32.0 32.1 32.2 32.2 32.3 32.4 32.5 32.6 32.7 32.7 32.8 32.9 33.0 33.1 33.1 33.2 33.3 33.4 33.5 33.6 33.6 33.7 33.8 33.9 34.0 34.0 34.1 34.2 34.3 34.4 34.5 34.5 34.6 34.7 34.8 34.9 34.9 35.0 35.1 35.2 35.3 35.4 35.4 35.5 35.6 35.7 35.8 35.8 35.9 36.0 36.1 36.2 36.3 36.3 36.4 36.5 36.6 36.7 36.7 36.8 36.9 37.0 37.1 37.2 37.2 37.3 37.4 37.5 37.6 37.6 37.7 37.8 37.9 38.0 38.1 38.1 38.2 38.3 38.4 38.5 38.5 38.6 38.7 38.8 38.9 39.0 39.0 39.1 39.2 39.3 39.4 39.4 39.5 39.6 39.7 39.8 39.9 39.9 40.0 40.1 40.2 40.3 40.3 40.4 40.5 40.6 40.7 40.8 40.8 40.9 41.0 41.1 41.2 41.2 41.3 41.4 41.5 41.6 41.7 41.7 41.8 41.9 42.0 42.1 42.1 42.2 42.3 42.4 42.5 42.6 42.6 42.7 42.8 42.9 43.0 43.0 43.1 43.2 43.3 43.4 43.5 43.5 43.6 43.7 43.8 43.9 43.9 44.0 44.1 44.2 44.3 44.4 44.4 44.5 44.6 44.7 44.8 44.8 44.9 45.0 45.1 45.2 45.3 45.3 45.4 45.5 45.6 45.7 45.7 45.8 45.9 46.0 46.1 46.2 46.2 46.3 46.4 46.5 46.6 46.6 46.7 46.8 46.9 47.0 47.1 47.1 47.2 47.3 47.4 47.5 47.5 47.6 47.7 47.8 47.9 48.0 48.0 48.1 48.2 48.3 48.4 48.4 48.5 48.6 48.7 48.8 48.9 48.9 49.0 49.1 49.2 49.3 49.3 49.4 49.5 49.6 49.7 49.8 49.8 49.9 50.0 50.1 50.2 50.2 50.3 50.4 50.5 50.6 50.7 50.7 50.8 50.9 51.0 51.1 51.1 51.2 51.3 51.4 51.5 51.6 51.6 51.7 51.8 51.9 52.0 52.0 52.1 52.2 52.3 52.4 52.5 52.5 52.6 52.7 52.8 52.9 52.9 53.0 53.1 53.2 53.3 53.4 53.4 53.5 53.6 53.7 53.8 53.8 53.9 54.0 54.1 54.2 54.3 54.3 54.4 54.5 54.6 54.7 54.7 54.8 54.9 55.0 55.1 55.2 55.2 55.3 55.4 55.5 55.6 55.6 55.7 55.8 55.9 56.0 56.1 56.1 56.2 56.3 56.4 56.5 56.5 56.6 56.7 56.8 56.9 57.0 57.0 57.1 57.2 57.3 57.4 57.4 57.5 57.6 57.7 57.8 57.9 57.9 58.0 58.1 58.2 58.3 58.3 58.4 58.5 58.6 58.7 58.8 58.8 58.9 59.0 59.1 59.2 59.2 59.3 59.4 59.5 59.6 59.7 59.7 59.8 59.9 60.0 60.1 60.1 60.2 60.3 60.4 60.5 60.6 60.6 60.7 60.8 60.9 61.0 61.0 61.1 61.2 61.3 61.4 61.5 61.5 61.6 61.7 61.8 61.9 61.9 62.0 62.1 62.2 62.3 62.4 62.4 62.5 62.6 62.7 62.8 62.8 62.9 63.0 63.1 63.2 63.3 63.3 63.4 63.5 63.6 63.7 63.7 63.8 63.9 64.0 64.1 64.2 64.2 64.3 64.4 64.5 64.6 64.6 64.7 64.8 64.9 65.0 65.1 65.1 65.2 65.3 65.4 65.5 65.5 65.6 65.7 65.8 65.9 66.0 66.0 66.1 66.2 66.3 66.4 66.4 66.5 66.6 66.7 66.8 66.9 66.9 67.0 67.1 67.2 67.3 67.3 67.4 67.5 67.6 67.7 67.8 67.8 67.9 68.0 68.1 68.2 68.2 68.3 68.4 68.5 68.6 68.7 68.7 68.8 68.9 69.0 69.1 69.1 69.2 69.3 69.4 69.5 69.6 69.6 69.7 69.8 69.9 70.0 70.0 70.1 70.2 70.3 70.4 70.5 70.5 70.6 70.7 70.8 70.9 70.9 71.0 71.1 71.2 71.3 71.4 71.4 71.5 71.6 71.7 71.8 71.8 71.9 72.0 72.1 72.2 72.3 72.3 72.4 72.5 72.6 72.7 72.7 72.8 72.9 73.0 73.1 73.2 73.2 73.3 73.4 73.5 73.6 73.6 73.7 73.8 73.9 74.0 74.1 74.1 74.2 74.3 74.4 74.5 74.5 74.6 74.7 74.8 74.9 75.0 75.0 75.1 75.2 75.3 75.4 75.5 75.5 75.6 75.7 75.8 75.9 75.9 76.0 76.1 76.2 76.3 76.4 76.4 76.5 76.6 76.7 76.8 76.8 76.9 77.0 77.1 77.2 77.3 77.3 77.4 77.5 77.6 77.7 77.7 77.8 77.9 78.0 78.1 78.2 78.2 78.3 78.4 78.5 78.6 78.6 78.7 78.8 78.9 79.0 79.1 79.1 79.2 79.3 79.4 79.5 79.5 79.6 79.7 79.8 79.9 80.0 80.0 80.1 80.2 80.3 80.4 80.4 80.5 80.6 80.7 80.8 80.9 80.9 81.0 81.1 81.2 81.3 81.3 81.4 81.5 81.6 81.7 81.8 81.8 81.9 82.0 82.1 82.2 82.2 82.3 82.4 82.5 82.6 82.7 82.7 82.8 82.9 83.0 83.1 83.1 83.2 83.3 83.4 83.5 83.6 83.6 83.7 83.8 83.9 84.0 84.0 84.1 84.2 84.3 84.4 84.5 84.5 84.6 84.7 84.8 84.9 84.9 85.0 85.1 85.2 85.3 85.4 85.4 85.5 85.6 85.7 85.8 85.8 85.9 86.0 86.1 86.2 86.3 86.3 86.4 86.5 86.6 86.7 86.7 86.8 86.9 87.0 87.1 87.2 87.2 87.3 87.4 87.5 87.6 87.6 87.7 87.8 87.9 88.0 88.1 88.1 88.2 88.3 88.4 88.5 88.5 88.6 88.7 88.8 88.9 89.0 89.0 89.1 89.2 89.3 89.4 89.4 89.5 89.6 89.7 89.8 89.9 89.9 90.0 90.1 90.2 90.3 90.3 90.4 90.5 90.6 90.7 90.8 90.8 90.9 91.0 91.1 91.2 91.2 91.3 91.4 91.5 91.6 91.7 91.7 91.8 91.9 92.0 92.1 92.1 92.2 92.3 92.4 92.5 92.6 92.6 92.7 92.8 92.9 93.0 93.0 93.1 93.2 93.3 93.4 93.5 93.5 93.6 93.7 93.8 93.9 93.9 94.0 94.1 94.2 94.3 94.4 94.4 94.5 94.6 94.7 94.8 94.8 94.9 95.0 95.1 95.2 95.3 95.3 95.4 95.5 95.6 95.7 95.7 95.8 95.9 96.0 96.1 96.2 96.2 96.3 96.4 96.5 96.6 96.6 96.7 96.8 96.9 97.0 97.1 97.1 97.2 97.3 97.4 97.5 97.5 97.6 97.7 97.8 97.9 98.0 98.0 98.1 98.2 98.3 98.4 98.4 98.5 98.6 98.7 98.8 98.9 98.9 99.0 99.1 99.2 99.3 99.3 99.4 99.5 99.6 99.7 99.8 99.8 99.9 -found 63 predictions from path traversal Error with prediction: snap lend_intergenic: 11897, rend_intergenic: 2689 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 13312, rend_intergenic: 11916 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 19384, rend_intergenic: 13368 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 27689, rend_intergenic: 22728 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31004, rend_intergenic: 28415 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31604, rend_intergenic: 31321 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 38433, rend_intergenic: 32122 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 44027, rend_intergenic: 41557 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 44678, rend_intergenic: 44105 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47500, rend_intergenic: 46463 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50456, rend_intergenic: 48047 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56850, rend_intergenic: 52198 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 57903, rend_intergenic: 57244 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 83983, rend_intergenic: 63386 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 87412, rend_intergenic: 85028 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94414, rend_intergenic: 90163 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97080, rend_intergenic: 95837 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 106449, rend_intergenic: 97166 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 111857, rend_intergenic: 107051 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121969, rend_intergenic: 117460 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142356, rend_intergenic: 124774 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142579, rend_intergenic: 142380 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 150197, rend_intergenic: 146470 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156244, rend_intergenic: 150734 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 170938, rend_intergenic: 169561 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200728, rend_intergenic: 193099 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203109, rend_intergenic: 201347 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 205287, rend_intergenic: 203116 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 207095, rend_intergenic: 205583 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 268793, rend_intergenic: 265404 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 79952, rend_intergenic: 79949 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 142356, rend_intergenic: 142353 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 23 predictions persist after filtering for low support