-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_5/scaffold_5_389675-624047

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_5-snap.97-T1
Valid prediction for GlimmerHMM_glimmerT_11614-T1
Valid prediction for GeneMark_model.19308_t
Valid prediction for snap_scaffold_5-snap.124-T1
Valid prediction for GlimmerHMM_glimmerT_11618-T1
Valid prediction for snap_scaffold_5-snap.103-T1
Valid prediction for snap_scaffold_5-snap.108-T1
Valid prediction for GeneMark_model.19280_t
Valid prediction for GeneMark_model.19286_t
Valid prediction for snap_scaffold_5-snap.117-T1
Valid prediction for GeneMark_model.19330_t
Valid prediction for GlimmerHMM_glimmerT_11629-T1
Valid prediction for GlimmerHMM_glimmerT_11625-T1
Valid prediction for GlimmerHMM_glimmerT_11619-T1
Valid prediction for snap_scaffold_5-snap.126-T1
Valid prediction for GlimmerHMM_glimmerT_11621-T1
Valid prediction for GeneMark_model.19310_t
Valid prediction for GlimmerHMM_glimmerT_11628-T1
Couldn't classify 12941, 12965
Couldn't classify 13055, 13443
Sorry, prediction pasa_asmbl_43756.p1 fails validation.
(AAG)	 TG	12941-12965	GT	AGG
(GAA)	 AG	13055-13443	AC	GAA
Valid prediction for GeneMark_model.19325_t
Valid prediction for snap_scaffold_5-snap.112-T1
Valid prediction for GeneMark_model.19336_t
Valid prediction for GeneMark_model.19300_t
Valid prediction for GeneMark_model.19338_t
Valid prediction for GeneMark_model.19292_t
Valid prediction for snap_scaffold_5-snap.110-T1
Valid prediction for GeneMark_model.19276_t
Valid prediction for snap_scaffold_5-snap.101-T1
Valid prediction for GeneMark_model.19315_t
Valid prediction for snap_scaffold_5-snap.121-T1
Valid prediction for snap_scaffold_5-snap.115-T1
Couldn't classify 12941, 12965
Couldn't classify 15596, 15717
Sorry, prediction pasa_asmbl_43757.p1 fails validation.
(AAG)	 TG	12941-12965	GT	AGG
(GAA)	 AG	13055-13270	GT	AGG
(GTC)	 AG	15596-15717	GA	TGG
-recovered pasa_asmbl_43757.p1, internal, 13055, 13270
Valid prediction for GlimmerHMM_glimmerT_11630-T1
Valid prediction for snap_scaffold_5-snap.99-T1
Valid prediction for GeneMark_model.19311_t
Valid prediction for Augustus_model.g7646.t1
Valid prediction for GeneMark_model.19334_t
Valid prediction for GeneMark_model.19298_t
Valid prediction for snap_scaffold_5-snap.93-T1
Valid prediction for GeneMark_model.19329_t
Valid prediction for snap_scaffold_5-snap.111-T1
Valid prediction for HiQ_model.g7638.t1
Valid prediction for GeneMark_model.19341_t
Valid prediction for GeneMark_model.19295_t
Valid prediction for GlimmerHMM_glimmerT_11633-T1
Valid prediction for Augustus_model.g7644.t1
Valid prediction for GeneMark_model.19319_t
Valid prediction for Augustus_model.g7652.t1
Valid prediction for GeneMark_model.19342_t
Valid prediction for GeneMark_model.19333_t
Valid prediction for snap_scaffold_5-snap.128-T1
Valid prediction for Augustus_model.g7651.t1
Valid prediction for GlimmerHMM_glimmerT_11616-T1
Valid prediction for snap_scaffold_5-snap.123-T1
Valid prediction for Augustus_model.g7637.t1
Valid prediction for GeneMark_model.19304_t
Couldn't classify 98825, 98920
Sorry, prediction Augustus_model.g7647.t1 fails validation.
(GTC)	 AG	98825-98920	GT	GAG
(GTG)	 AG	99390-99493	GT	GGG
(GCA)	 AG	101022-101171	GT	GAG
(ATA)	 AG	102237-102271	CT	AGC
-recovered Augustus_model.g7647.t1, terminal, 102237, 102271
-recovered Augustus_model.g7647.t1, internal, 98825, 98920
-recovered Augustus_model.g7647.t1, internal, 99390, 99493
-recovered Augustus_model.g7647.t1, internal, 101022, 101171
Valid prediction for GeneMark_model.19278_t
Valid prediction for snap_scaffold_5-snap.120-T1
Valid prediction for GeneMark_model.19302_t
Valid prediction for snap_scaffold_5-snap.113-T1
Valid prediction for Augustus_model.g7643.t1
Valid prediction for GeneMark_model.19288_t
Valid prediction for snap_scaffold_5-snap.129-T1
Valid prediction for snap_scaffold_5-snap.95-T1
Valid prediction for snap_scaffold_5-snap.107-T1
Valid prediction for GeneMark_model.19296_t
Valid prediction for GeneMark_model.19323_t
Valid prediction for GeneMark_model.19344_t
Valid prediction for snap_scaffold_5-snap.105-T1
Valid prediction for GlimmerHMM_glimmerT_11626-T1
Valid prediction for GeneMark_model.19306_t
Valid prediction for GeneMark_model.19282_t
Valid prediction for GlimmerHMM_glimmerT_11610-T1
Valid prediction for GlimmerHMM_glimmerT_11632-T1
Valid prediction for snap_scaffold_5-snap.118-T1
Valid prediction for GeneMark_model.19340_t
Valid prediction for GlimmerHMM_glimmerT_11634-T1
Valid prediction for snap_scaffold_5-snap.127-T1
Valid prediction for GlimmerHMM_glimmerT_11631-T1
Valid prediction for GlimmerHMM_glimmerT_11609-T1
Valid prediction for GeneMark_model.19285_t
Valid prediction for Augustus_model.g7639.t1
Valid prediction for GeneMark_model.19321_t
Valid prediction for GeneMark_model.19290_t
Valid prediction for GeneMark_model.19293_t
Valid prediction for GeneMark_model.19313_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 155537, 155611
Sorry, prediction pasa_asmbl_45172.p1 fails validation.
(GTG)	 GG	155537-155611	GT	GTG
(ACT)	 AG	155960-156043	GT	CGG
(GTC)	 AG	156170-156345	GT	GGG
(CAT)	 AG	156481-156544	GT	GCG
(GCC)	 AG	157234-157353	GT	AGG
(GAT)	 AG	158143-158232	GT	AGG
(CTG)	 AG	159205-159354	GT	GAG
-recovered pasa_asmbl_45172.p1, terminal, 159205, 159354
-recovered pasa_asmbl_45172.p1, internal, 155960, 156043
-recovered pasa_asmbl_45172.p1, internal, 156170, 156345
-recovered pasa_asmbl_45172.p1, internal, 156481, 156544
-recovered pasa_asmbl_45172.p1, internal, 157234, 157353
-recovered pasa_asmbl_45172.p1, internal, 158143, 158232
-recovered pasa_asmbl_45172.p1, internal, 159205, 159354
Valid prediction for GeneMark_model.19339_t
Valid prediction for GeneMark_model.19291_t
Valid prediction for GeneMark_model.19283_t
Couldn't classify 184340, 184427
Couldn't classify 187269, 187358
Sorry, prediction pasa_asmbl_46434.p1 fails validation.
(CTG)	 AC	184340-184427	GT	GGG
(GGA)	 AG	186197-186279	GT	AGG
(GTG)	 AG	186630-186758	GT	AGG
(TCC)	 AG	187269-187358	TC	CCT
-recovered pasa_asmbl_46434.p1, internal, 186197, 186279
-recovered pasa_asmbl_46434.p1, internal, 186630, 186758
Valid prediction for GeneMark_model.19316_t
Couldn't classify 199971, 199990
Sorry, prediction pasa_asmbl_45168.p1 fails validation.
(TCA)	 TG	199971-199990	GT	GGG
(GGC)	 AG	200673-200733	GT	AGG
(ACT)	 AG	200987-201238	CT	GAC
-recovered pasa_asmbl_45168.p1, terminal, 200987, 201238
-recovered pasa_asmbl_45168.p1, internal, 200673, 200733
Valid prediction for Augustus_model.g7649.t1
Valid prediction for GeneMark_model.19312_t
Valid prediction for GlimmerHMM_glimmerT_11623-T1
Valid prediction for snap_scaffold_5-snap.116-T1
Valid prediction for GlimmerHMM_glimmerT_11624-T1
Valid prediction for GeneMark_model.19326_t
Valid prediction for snap_scaffold_5-snap.122-T1
Valid prediction for snap_scaffold_5-snap.106-T1
Valid prediction for GeneMark_model.19287_t
Couldn't classify 209050, 209103
Couldn't classify 211159, 211241
Sorry, prediction pasa_asmbl_45165.p1 fails validation.
(AGT)	 AC	209050-209103	GT	AGG
(GGC)	 AG	209594-209758	GT	ATG
(GTG)	 AG	210299-210463	GT	CTG
(GTG)	 AG	210688-210816	GT	AGG
(GTG)	 AG	210964-211072	GT	TGG
(GGC)	 AG	211159-211241	CG	GCC
-recovered pasa_asmbl_45165.p1, internal, 209594, 209758
-recovered pasa_asmbl_45165.p1, internal, 210299, 210463
-recovered pasa_asmbl_45165.p1, internal, 210688, 210816
-recovered pasa_asmbl_45165.p1, internal, 210964, 211072
Valid prediction for snap_scaffold_5-snap.102-T1
Valid prediction for snap_scaffold_5-snap.130-T1
Valid prediction for GeneMark_model.19303_t
Valid prediction for GeneMark_model.19314_t
Valid prediction for Augustus_model.g7645.t1
Valid prediction for snap_scaffold_5-snap.100-T1
Valid prediction for GeneMark_model.19320_t
Valid prediction for GeneMark_model.19327_t
Valid prediction for Augustus_model.g7640.t1
Valid prediction for snap_scaffold_5-snap.96-T1
Valid prediction for GlimmerHMM_glimmerT_11611-T1
Valid prediction for snap_scaffold_5-snap.119-T1
Valid prediction for GeneMark_model.19305_t
Valid prediction for GlimmerHMM_glimmerT_11620-T1
Valid prediction for GeneMark_model.19343_t
Valid prediction for Augustus_model.g7641.t1
Valid prediction for GeneMark_model.19328_t
Valid prediction for GlimmerHMM_glimmerT_11615-T1
Valid prediction for GeneMark_model.19322_t
Valid prediction for GeneMark_model.19275_t
Valid prediction for snap_scaffold_5-snap.114-T1
Valid prediction for GeneMark_model.19318_t
Valid prediction for GeneMark_model.19335_t
Valid prediction for GeneMark_model.19294_t
Valid prediction for GlimmerHMM_glimmerT_11613-T1
Valid prediction for GeneMark_model.19331_t
Valid prediction for snap_scaffold_5-snap.104-T1
Valid prediction for snap_scaffold_5-snap.109-T1
Valid prediction for Augustus_model.g7648.t1
Couldn't classify 211224, 211344
Sorry, prediction GeneMark_model.19279_t fails validation.
(ATG)	 TC	207759-207976	GT	AGG
(TGA)	 AG	209052-209103	GT	AGG
(GGC)	 AG	209594-209758	GT	ATG
(GTG)	 AG	210299-210463	GT	CTG
(GTG)	 AG	210688-210816	GT	AGG
(GTG)	 AG	210964-211072	GT	TGG
(GGC)	 AG	211159-211199	GT	AGG
(GTG)	 AG	211224-211344	GT	CGG
-recovered GeneMark_model.19279_t, initial, 207759, 207976
-recovered GeneMark_model.19279_t, internal, 209052, 209103
-recovered GeneMark_model.19279_t, internal, 209594, 209758
-recovered GeneMark_model.19279_t, internal, 210299, 210463
-recovered GeneMark_model.19279_t, internal, 210688, 210816
-recovered GeneMark_model.19279_t, internal, 210964, 211072
-recovered GeneMark_model.19279_t, internal, 211159, 211199
-recovered GeneMark_model.19279_t, internal, 211224, 211344
Valid prediction for GlimmerHMM_glimmerT_11617-T1
Valid prediction for snap_scaffold_5-snap.98-T1
Valid prediction for GeneMark_model.19317_t
Valid prediction for snap_scaffold_5-snap.125-T1
Valid prediction for Augustus_model.g7642.t1
Valid prediction for HiQ_model.g7650.t1
Valid prediction for GeneMark_model.19309_t
Valid prediction for GeneMark_model.19284_t
Valid prediction for GeneMark_model.19307_t
Valid prediction for snap_scaffold_5-snap.94-T1
Couldn't classify 48411, 48479
Couldn't classify 49427, 50173
Sorry, prediction pasa_asmbl_45173.p1 fails validation.
(ACG)	 CC	48411-48479	GT	AGG
(GGG)	 AG	49427-50173	AA	GAA
Valid prediction for GlimmerHMM_glimmerT_11627-T1
Valid prediction for GlimmerHMM_glimmerT_11612-T1
Valid prediction for GeneMark_model.19281_t
Valid prediction for GeneMark_model.19301_t
Valid prediction for GeneMark_model.19289_t
Valid prediction for GeneMark_model.19324_t
Valid prediction for GeneMark_model.19337_t
Valid prediction for GlimmerHMM_glimmerT_11622-T1
Valid prediction for GeneMark_model.19332_t
Valid prediction for GeneMark_model.19297_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 14560, rend_intergenic: 10065  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25294, rend_intergenic: 15409  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31360, rend_intergenic: 27422  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33475, rend_intergenic: 31741  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52088, rend_intergenic: 34414  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57229, rend_intergenic: 55825  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71066, rend_intergenic: 62804  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77585, rend_intergenic: 75020  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94211, rend_intergenic: 77603  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104135, rend_intergenic: 99339  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134557, rend_intergenic: 107410  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143527, rend_intergenic: 140035  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171289, rend_intergenic: 146612  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171742, rend_intergenic: 171330  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173025, rend_intergenic: 171854  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193959, rend_intergenic: 188282  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199760, rend_intergenic: 198633  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 221710, rend_intergenic: 205397  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 230904, rend_intergenic: 227995  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 234373
-exon list size: 866


building trellis

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53.1    
53.2    
53.3    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.7    
99.8    
99.9    
-found 54 predictions from path traversal
Error with prediction: snap lend_intergenic: 14560, rend_intergenic: 10065  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25294, rend_intergenic: 15409  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31360, rend_intergenic: 27422  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33475, rend_intergenic: 31741  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52088, rend_intergenic: 34414  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57229, rend_intergenic: 55825  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71066, rend_intergenic: 62804  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77585, rend_intergenic: 75020  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94211, rend_intergenic: 77603  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104135, rend_intergenic: 99339  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134557, rend_intergenic: 107410  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143527, rend_intergenic: 140035  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171289, rend_intergenic: 146612  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171742, rend_intergenic: 171330  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173025, rend_intergenic: 171854  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193959, rend_intergenic: 188282  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199760, rend_intergenic: 198633  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 221710, rend_intergenic: 205397  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 230904, rend_intergenic: 227995  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 26 predictions persist after filtering for low support