-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_5/scaffold_5_17033278-17262410

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.23102_t
Valid prediction for CodingQuarry_transcript_52302-T1
Valid prediction for Augustus_model.g9214.t1
Valid prediction for GeneMark_model.23088_t
Valid prediction for GlimmerHMM_glimmerT_13771-T1
Valid prediction for GlimmerHMM_glimmerT_13768-T1
Valid prediction for GeneMark_model.23083_t
Valid prediction for snap_scaffold_5-snap.3221-T1
Valid prediction for snap_scaffold_5-snap.3206-T1
Valid prediction for Augustus_model.g9206.t1
Valid prediction for GlimmerHMM_glimmerT_13792-T1
Valid prediction for GeneMark_model.23107_t
Valid prediction for GeneMark_model.23074_t
Valid prediction for GeneMark_model.23099_t
Valid prediction for GlimmerHMM_glimmerT_13767-T1
Valid prediction for GlimmerHMM_glimmerT_13787-T1
Valid prediction for GeneMark_model.23079_t
Valid prediction for GeneMark_model.23068_t
Valid prediction for snap_scaffold_5-snap.3191-T1
Valid prediction for GeneMark_model.23081_t
Valid prediction for GeneMark_model.23077_t
Valid prediction for snap_scaffold_5-snap.3180-T1
Valid prediction for GeneMark_model.23095_t
Valid prediction for GlimmerHMM_glimmerT_13780-T1
Valid prediction for GeneMark_model.23066_t
Valid prediction for GeneMark_model.23058_t
Valid prediction for GeneMark_model.23104_t
Valid prediction for Augustus_model.g9209.t1
Valid prediction for Augustus_model.g9219.t1
Valid prediction for HiQ_model.g9218.t1
Valid prediction for snap_scaffold_5-snap.3216-T1
Valid prediction for GlimmerHMM_glimmerT_13781-T1
Valid prediction for GlimmerHMM_glimmerT_13779-T1
Valid prediction for snap_scaffold_5-snap.3199-T1
Couldn't classify 158974, 159105
Sorry, prediction pasa_asmbl_44802.p2 fails validation.
(ATG)	 CC	158084-158095	GT	AGG
(GGA)	 AG	158452-158554	GT	CGG
(GAG)	 AG	158762-158862	GT	TGG
(GGA)	 AG	158974-159105	CT	TCC
-recovered pasa_asmbl_44802.p2, initial, 158084, 158095
-recovered pasa_asmbl_44802.p2, internal, 158452, 158554
-recovered pasa_asmbl_44802.p2, internal, 158762, 158862
Valid prediction for GlimmerHMM_glimmerT_13786-T1
Valid prediction for GeneMark_model.23100_t
Valid prediction for GlimmerHMM_glimmerT_13761-T1
Valid prediction for GeneMark_model.23073_t
Couldn't classify 214136, 214421
Sorry, prediction pasa_asmbl_44816.p1 fails validation.
(CAG)	 AG	214136-214421	GT	AGG
(AGG)	 AG	214883-214949	GT	GAG
(ACC)	 AG	215597-215669	GT	AGG
(GTC)	 AG	216392-216552	GT	GGG
(AGT)	 AG	216701-216816	GT	GGG
(GAC)	 AG	217985-218055	GT	AGG
(CAT)	 AG	218560-218712	GT	CGG
(TGG)	 AG	218825-218925	GT	CGG
(GGA)	 AG	219043-219151	GT	AGG
(GAA)	 AG	219252-219343	GT	ATG
(GAT)	 AG	219701-219816	GT	AGG
(ACC)	 AG	220056-220195	GT	AGG
(GAA)	 AG	220512-220604	GT	ATG
(GTC)	 AG	220740-220844	GT	AGG
(GTG)	 AG	221048-221185	GT	AGG
(GAC)	 AG	222637-222816	GA	AAG
-recovered pasa_asmbl_44816.p1, terminal, 222637, 222816
-recovered pasa_asmbl_44816.p1, internal, 214136, 214421
-recovered pasa_asmbl_44816.p1, internal, 214883, 214949
-recovered pasa_asmbl_44816.p1, internal, 215597, 215669
-recovered pasa_asmbl_44816.p1, internal, 216392, 216552
-recovered pasa_asmbl_44816.p1, internal, 216701, 216816
-recovered pasa_asmbl_44816.p1, internal, 217985, 218055
-recovered pasa_asmbl_44816.p1, internal, 218560, 218712
-recovered pasa_asmbl_44816.p1, internal, 218825, 218925
-recovered pasa_asmbl_44816.p1, internal, 219043, 219151
-recovered pasa_asmbl_44816.p1, internal, 219252, 219343
-recovered pasa_asmbl_44816.p1, internal, 219701, 219816
-recovered pasa_asmbl_44816.p1, internal, 220056, 220195
-recovered pasa_asmbl_44816.p1, internal, 220512, 220604
-recovered pasa_asmbl_44816.p1, internal, 220740, 220844
-recovered pasa_asmbl_44816.p1, internal, 221048, 221185
Valid prediction for pasa_asmbl_44796.p1
Couldn't classify 3439, 3487
Sorry, prediction pasa_asmbl_44795.p1 fails validation.
(GTC)	 AT	3439-3487	GC	ATG
(GGA)	 AG	3865-3995	GT	TGG
(GCC)	 AG	4171-4307	GT	AGG
(GGG)	 AG	4464-4668	GT	GGG
(GAG)	 AG	4917-4961	CA	GAC
-recovered pasa_asmbl_44795.p1, terminal, 4917, 4961
-recovered pasa_asmbl_44795.p1, internal, 3865, 3995
-recovered pasa_asmbl_44795.p1, internal, 4171, 4307
-recovered pasa_asmbl_44795.p1, internal, 4464, 4668
Valid prediction for CodingQuarry_transcript_52299-T1
Valid prediction for GlimmerHMM_glimmerT_13765-T1
Valid prediction for snap_scaffold_5-snap.3215-T1
Valid prediction for GlimmerHMM_glimmerT_13773-T1
Valid prediction for GeneMark_model.23097_t
Valid prediction for GlimmerHMM_glimmerT_13759-T1
Valid prediction for snap_scaffold_5-snap.3220-T1
Valid prediction for GlimmerHMM_glimmerT_13778-T1
Valid prediction for GeneMark_model.23076_t
Valid prediction for snap_scaffold_5-snap.3181-T1
Valid prediction for Augustus_model.g9205.t1
Valid prediction for Augustus_model.g9203.t1
Valid prediction for GeneMark_model.23109_t
Valid prediction for Augustus_model.g9202.t1
Valid prediction for HiQ_model.g9201.t1
Valid prediction for snap_scaffold_5-snap.3188-T1
Valid prediction for GlimmerHMM_glimmerT_13766-T1
Valid prediction for GeneMark_model.23071_t
Valid prediction for GeneMark_model.23063_t
Valid prediction for GlimmerHMM_glimmerT_13760-T1
Valid prediction for snap_scaffold_5-snap.3224-T1
Valid prediction for snap_scaffold_5-snap.3218-T1
Valid prediction for snap_scaffold_5-snap.3195-T1
Valid prediction for snap_scaffold_5-snap.3204-T1
Valid prediction for snap_scaffold_5-snap.3223-T1
Valid prediction for snap_scaffold_5-snap.3208-T1
Couldn't classify 43885, 43998
Sorry, prediction pasa_asmbl_44797.p1 fails validation.
(GGT)	 CA	43885-43998	GT	ATG
(GCC)	 AG	45133-45346	GT	AGG
(AGA)	 AG	45611-45721	GT	AGG
(ATC)	 AG	45854-45947	GT	AGG
(GTT)	 AG	46233-46371	GT	AGG
(GTG)	 AG	46545-46742	AG	AAA
add_exon() Sorry, pasa_asmbl_44797.p1 45133-45346-terminal-3 is invalid.
-recovered pasa_asmbl_44797.p1, terminal, 45133, 45346
-recovered pasa_asmbl_44797.p1, terminal, 46545, 46742
-recovered pasa_asmbl_44797.p1, internal, 45133, 45346
-recovered pasa_asmbl_44797.p1, internal, 45611, 45721
-recovered pasa_asmbl_44797.p1, internal, 45854, 45947
-recovered pasa_asmbl_44797.p1, internal, 46233, 46371
Valid prediction for Augustus_model.g9210.t1
Valid prediction for GlimmerHMM_glimmerT_13788-T1
Valid prediction for Augustus_model.g9215.t1
Valid prediction for snap_scaffold_5-snap.3187-T1
Valid prediction for Augustus_model.g9220.t1
Valid prediction for CodingQuarry_transcript_52298-T1
Valid prediction for snap_scaffold_5-snap.3193-T1
Valid prediction for GeneMark_model.23059_t
Valid prediction for Augustus_model.g9200.t1
Valid prediction for GeneMark_model.23108_t
Couldn't classify 140084, 140259
Couldn't classify 141681, 141746
Sorry, prediction pasa_asmbl_44800.p1 fails validation.
(GCA)	 TG	140084-140259	GT	AGG
(GGT)	 AG	140968-141153	GT	AGG
(GTA)	 AG	141494-141584	GT	AGG
(GCT)	 AG	141681-141746	AC	GGA
-recovered pasa_asmbl_44800.p1, internal, 140968, 141153
-recovered pasa_asmbl_44800.p1, internal, 141494, 141584
Valid prediction for Augustus_model.g9212.t1
Valid prediction for snap_scaffold_5-snap.3185-T1
Valid prediction for GlimmerHMM_glimmerT_13770-T1
Valid prediction for snap_scaffold_5-snap.3179-T1
Valid prediction for Augustus_model.g9204.t1
Valid prediction for snap_scaffold_5-snap.3203-T1
Valid prediction for snap_scaffold_5-snap.3192-T1
Valid prediction for GlimmerHMM_glimmerT_13762-T1
Valid prediction for snap_scaffold_5-snap.3211-T1
Valid prediction for GeneMark_model.23090_t
Valid prediction for GlimmerHMM_glimmerT_13791-T1
Valid prediction for GeneMark_model.23086_t
Valid prediction for snap_scaffold_5-snap.3197-T1
Valid prediction for pasa_asmbl_44812.p1
Valid prediction for GeneMark_model.23065_t
Valid prediction for GeneMark_model.23061_t
Valid prediction for HiQ_model.g9221.t1
Couldn't classify 158452, 158554
Couldn't classify 161557, 161688
Sorry, prediction pasa_asmbl_44804.p2 fails validation.
(GGA)	 AG	158452-158554	GT	CGG
(GAG)	 AG	158762-158862	GT	TGG
(GGA)	 AG	161557-161688	CT	TCC
-recovered pasa_asmbl_44804.p2, internal, 158452, 158554
-recovered pasa_asmbl_44804.p2, internal, 158762, 158862
Valid prediction for snap_scaffold_5-snap.3200-T1
Valid prediction for GlimmerHMM_glimmerT_13784-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_13783-T1
Valid prediction for GlimmerHMM_glimmerT_13789-T1
Valid prediction for snap_scaffold_5-snap.3205-T1
Valid prediction for CodingQuarry_transcript_52300-T1
Valid prediction for snap_scaffold_5-snap.3207-T1
Valid prediction for snap_scaffold_5-snap.3198-T1
Valid prediction for snap_scaffold_5-snap.3190-T1
Valid prediction for GlimmerHMM_glimmerT_13772-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_5-snap.3202-T1
Valid prediction for GlimmerHMM_glimmerT_13774-T1
Valid prediction for GeneMark_model.23078_t
Valid prediction for snap_scaffold_5-snap.3225-T1
Valid prediction for Augustus_model.g9213.t1
Valid prediction for GeneMark_model.23069_t
Valid prediction for GeneMark_model.23105_t
Valid prediction for GeneMark_model.23106_t
Valid prediction for GlimmerHMM_glimmerT_13777-T1
Valid prediction for snap_scaffold_5-snap.3219-T1
Valid prediction for GeneMark_model.23067_t
Valid prediction for snap_scaffold_5-snap.3184-T1
Valid prediction for GeneMark_model.23060_t
Valid prediction for GlimmerHMM_glimmerT_13785-T1
Valid prediction for Augustus_model.g9216.t1
Valid prediction for snap_scaffold_5-snap.3222-T1
Valid prediction for GeneMark_model.23075_t
Valid prediction for GlimmerHMM_glimmerT_13775-T1
Valid prediction for GeneMark_model.23103_t
Valid prediction for GeneMark_model.23094_t
Valid prediction for Augustus_model.g9211.t1
Valid prediction for GlimmerHMM_glimmerT_13769-T1
Valid prediction for GeneMark_model.23062_t
Valid prediction for GlimmerHMM_glimmerT_13776-T1
Valid prediction for snap_scaffold_5-snap.3194-T1
Couldn't classify 103600, 103667
Sorry, prediction GeneMark_model.23092_t fails validation.
(ATG)	 AG	102135-102250	GT	TTG
(ACG)	 AG	102807-102965	GT	AGG
(GGA)	 AG	103008-103053	GT	TGG
(GGC)	 AG	103600-103667	GT	AGG
-recovered GeneMark_model.23092_t, initial, 102135, 102250
-recovered GeneMark_model.23092_t, internal, 102135, 102250
-recovered GeneMark_model.23092_t, internal, 102807, 102965
-recovered GeneMark_model.23092_t, internal, 103008, 103053
-recovered GeneMark_model.23092_t, internal, 103600, 103667
Valid prediction for GeneMark_model.23093_t
Valid prediction for snap_scaffold_5-snap.3183-T1
Valid prediction for snap_scaffold_5-snap.3186-T1
Valid prediction for GeneMark_model.23098_t
Valid prediction for GeneMark_model.23064_t
Valid prediction for GeneMark_model.23101_t
Valid prediction for snap_scaffold_5-snap.3182-T1
Valid prediction for Augustus_model.g9207.t1
Valid prediction for snap_scaffold_5-snap.3201-T1
Valid prediction for pasa_asmbl_46171.p1
Valid prediction for GlimmerHMM_glimmerT_13790-T1
Valid prediction for snap_scaffold_5-snap.3217-T1
Valid prediction for GeneMark_model.23085_t
Valid prediction for GeneMark_model.23072_t
Valid prediction for GlimmerHMM_glimmerT_13764-T1
Valid prediction for GeneMark_model.23070_t
Valid prediction for snap_scaffold_5-snap.3209-T1
Valid prediction for CodingQuarry_transcript_52301-T1
Valid prediction for GeneMark_model.23089_t
Valid prediction for GlimmerHMM_glimmerT_13763-T1
Valid prediction for Augustus_model.g9208.t1
Valid prediction for GeneMark_model.23087_t
Valid prediction for snap_scaffold_5-snap.3189-T1
Valid prediction for GeneMark_model.23082_t
Valid prediction for snap_scaffold_5-snap.3213-T1
Couldn't classify 110015, 110022
Sorry, prediction GeneMark_model.23091_t fails validation.
(AGG)	 AG	110015-110022	GT	GGG
(GGA)	 AG	110142-110153	GT	AGG
(GAA)	 AG	110350-110355	GT	GGG
(AAG)	 AG	110480-110521	GT	GAG
(AGA)	 AG	110545-110697	GC	GCG
(AAA)	 AG	110721-110732	GT	AGG
(GCA)	 AG	111104-111148	GT	GGG
(AGG)	 AG	111171-111260	GT	GGG
(GTC)	 AG	111297-111307	GT	TGG
(ACC)	 AG	111388-111425	TC	GAT
-recovered GeneMark_model.23091_t, terminal, 111388, 111425
-recovered GeneMark_model.23091_t, internal, 110015, 110022
-recovered GeneMark_model.23091_t, internal, 110142, 110153
-recovered GeneMark_model.23091_t, internal, 110350, 110355
-recovered GeneMark_model.23091_t, internal, 110480, 110521
-recovered GeneMark_model.23091_t, internal, 110545, 110697
-recovered GeneMark_model.23091_t, internal, 110721, 110732
-recovered GeneMark_model.23091_t, internal, 111104, 111148
-recovered GeneMark_model.23091_t, internal, 111171, 111260
-recovered GeneMark_model.23091_t, internal, 111297, 111307
Valid prediction for snap_scaffold_5-snap.3210-T1
Valid prediction for snap_scaffold_5-snap.3214-T1
Valid prediction for GeneMark_model.23084_t
Valid prediction for snap_scaffold_5-snap.3212-T1
Valid prediction for GeneMark_model.23080_t
Valid prediction for HiQ_model.g9217.t1
Valid prediction for GlimmerHMM_glimmerT_13782-T1
Valid prediction for snap_scaffold_5-snap.3196-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 28159, rend_intergenic: 16585  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45396, rend_intergenic: 45129  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48279, rend_intergenic: 45613  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62668, rend_intergenic: 61729  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81486, rend_intergenic: 76074  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84335, rend_intergenic: 82634  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103362, rend_intergenic: 98612  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142127, rend_intergenic: 134456  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154462, rend_intergenic: 147668  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 159860, rend_intergenic: 156148  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162977, rend_intergenic: 161235  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184602, rend_intergenic: 179069  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192509, rend_intergenic: 190308  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 229133
-exon list size: 772


building trellis

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41.7    
41.9    
42.0    
42.1    
42.2    
42.4    
42.5    
42.6    
42.8    
42.9    
43.0    
43.2    
43.3    
43.4    
43.5    
43.7    
43.8    
43.9    
44.1    
44.2    
44.3    
44.4    
44.6    
44.7    
44.8    
45.0    
45.1    
45.2    
45.3    
45.5    
45.6    
45.7    
45.9    
46.0    
46.1    
46.3    
46.4    
46.5    
46.6    
46.8    
46.9    
47.0    
47.2    
47.3    
47.4    
47.5    
47.7    
47.8    
47.9    
48.1    
48.2    
48.3    
48.4    
48.6    
48.7    
48.8    
49.0    
49.1    
49.2    
49.4    
49.5    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.5    
50.6    
50.8    
50.9    
51.0    
51.2    
51.3    
51.4    
51.6    
51.7    
51.8    
51.9    
52.1    
52.2    
52.3    
52.5    
52.6    
52.7    
52.8    
53.0    
53.1    
53.2    
53.4    
53.5    
53.6    
53.7    
53.9    
54.0    
54.1    
54.3    
54.4    
54.5    
54.7    
54.8    
54.9    
55.0    
55.2    
55.3    
55.4    
55.6    
55.7    
55.8    
55.9    
56.1    
56.2    
56.3    
56.5    
56.6    
56.7    
56.8    
57.0    
57.1    
57.2    
57.4    
57.5    
57.6    
57.8    
57.9    
58.0    
58.1    
58.3    
58.4    
58.5    
58.7    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.6    
59.7    
59.8    
59.9    
60.1    
60.2    
60.3    
60.5    
60.6    
60.7    
60.9    
61.0    
61.1    
61.2    
61.4    
61.5    
61.6    
61.8    
61.9    
62.0    
62.1    
62.3    
62.4    
62.5    
62.7    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.6    
63.7    
63.8    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.9    
65.0    
65.1    
65.2    
65.4    
65.5    
65.6    
65.8    
65.9    
66.0    
66.1    
66.3    
66.4    
66.5    
66.7    
66.8    
66.9    
67.1    
67.2    
67.3    
67.4    
67.6    
67.7    
67.8    
68.0    
68.1    
68.2    
68.3    
68.5    
68.6    
68.7    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.8    
69.9    
70.0    
70.2    
70.3    
70.4    
70.5    
70.7    
70.8    
70.9    
71.1    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
72.0    
72.1    
72.2    
72.4    
72.5    
72.6    
72.7    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.6    
73.8    
73.9    
74.0    
74.2    
74.3    
74.4    
74.5    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.8    
76.0    
76.1    
76.2    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.3    
77.4    
77.5    
77.6    
77.8    
77.9    
78.0    
78.2    
78.3    
78.4    
78.6    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.5    
79.6    
79.7    
79.8    
80.0    
80.1    
80.2    
80.4    
80.5    
80.6    
80.7    
80.9    
81.0    
81.1    
81.3    
81.4    
81.5    
81.7    
81.8    
81.9    
82.0    
82.2    
82.3    
82.4    
82.6    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.5    
83.6    
83.7    
83.9    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.8    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.7    
85.8    
85.9    
86.0    
86.2    
86.3    
86.4    
86.6    
86.7    
86.8    
87.0    
87.1    
87.2    
87.3    
87.5    
87.6    
87.7    
87.9    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.8    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.7    
89.8    
89.9    
90.1    
90.2    
90.3    
90.4    
90.6    
90.7    
90.8    
91.0    
91.1    
91.2    
91.3    
91.5    
91.6    
91.7    
91.9    
92.0    
92.1    
92.2    
92.4    
92.5    
92.6    
92.8    
92.9    
93.0    
93.2    
93.3    
93.4    
93.5    
93.7    
93.8    
93.9    
94.1    
94.2    
94.3    
94.4    
94.6    
94.7    
94.8    
95.0    
95.1    
95.2    
95.3    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.3    
96.4    
96.5    
96.6    
96.8    
96.9    
97.0    
97.2    
97.3    
97.4    
97.5    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.9    
-found 34 predictions from path traversal
Error with prediction: snap lend_intergenic: 28159, rend_intergenic: 16585  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45396, rend_intergenic: 45129  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48279, rend_intergenic: 45613  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62668, rend_intergenic: 61729  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81486, rend_intergenic: 76074  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84335, rend_intergenic: 82634  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103362, rend_intergenic: 98612  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142127, rend_intergenic: 134456  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154462, rend_intergenic: 147668  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 159860, rend_intergenic: 156148  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162977, rend_intergenic: 161235  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184602, rend_intergenic: 179069  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192509, rend_intergenic: 190308  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 27 predictions persist after filtering for low support